Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_G24
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    25   2.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   3.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = +3

Query: 411 DKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEI 566
           D   K IE A    +      ++    + K   D   L  LH +GG K +E+
Sbjct: 194 DSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEV 245


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
 Frame = -3

Query: 562 SDNFFPPSACNVPSCSLSSSIFVIGPLACSLV*ANL--NEAIAASSIIF*NLSFLATKSV 389
           +D  F      +  C L SSIFV+G     LV   +  N+A+   + +F  ++ LA   +
Sbjct: 85  NDIIFSNKLVQIVFCVLYSSIFVLGVFGNVLVCYVVFRNKAMQTVTNLF--ITNLALSDI 142

Query: 388 SQLSSTRAPWFLSNLTATNPWRAVLPANLVAFAHPIAWACSWSHVSALSASLLCISNAFL 209
             L    A  F  + T    W   +   L+    P+A  CS  ++S L+ + + I   F+
Sbjct: 143 --LLCVLAVPFTPSYTFMRRW---VFGKLLCHTVPLAQGCS-VYISTLTLTSIAIDRFFV 196


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 304 LVAFAHPIAWACSWSHVSALSASLLCI 224
           LV   HP    C+W H   L++ L  +
Sbjct: 212 LVRPMHPPNVTCAWDHAGELASDLYAL 238


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 304 LVAFAHPIAWACSWSHVSALSASLLCI 224
           LV   HP    C+W H   L++ L  +
Sbjct: 212 LVRPMHPPNVTCAWDHAGELASDLYAL 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 887,583
Number of Sequences: 2352
Number of extensions: 19435
Number of successful extensions: 84
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)