Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_G24
(810 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts prot... 167 4e-41
AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts pr... 164 4e-40
BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein. 161 2e-39
BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongati... 149 2e-35
Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein. 31 4.9
BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein. 31 4.9
BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein. 31 4.9
AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein. 31 4.9
AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein. 31 4.9
AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein. 31 4.9
AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein. 31 4.9
AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein. 31 4.9
AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein pro... 31 4.9
AK131308-1|BAD18474.1| 891|Homo sapiens protein ( Homo sapiens ... 30 8.6
>L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts
protein.
Length = 294
Score = 167 bits (406), Expect = 4e-41
Identities = 95/234 (40%), Positives = 132/234 (56%), Gaps = 9/234 (3%)
Frame = +3
Query: 120 RIHTSPAYKAAESS--LLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWA 293
R++ P A+ SS LL KLR KTGY+ NCKKALE D +AE WLH++AQ GW+
Sbjct: 2 RVYAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWS 61
Query: 294 KATKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTK 473
KA KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 62 KAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTL 121
Query: 474 LQAKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDV 647
+K L+S +L L A ++ L + LAL IG +GEN +L+RA W
Sbjct: 122 KDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGF 180
Query: 648 KIAGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDIGRQLCQHIVGCAP 794
+ Y H A GKYGAL+ +Q ++ D+GR+L QH+VG AP
Sbjct: 181 YVGSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAP 234
>AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts
protein.
Length = 325
Score = 164 bits (398), Expect = 4e-40
Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 9/232 (3%)
Frame = +3
Query: 126 HTSPAYKAAESS--LLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 299
+ P A+ SS LL KLR KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 300 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 479
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 480 AKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKI 653
+K L+S +L L A ++ L + LAL IG +GEN +L+RA W +
Sbjct: 155 QPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGFYV 213
Query: 654 AGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDIGRQLCQHIVGCAP 794
Y H A GKYGAL+ +Q ++ D+GR+L QH+VG AP
Sbjct: 214 GSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAP 265
>BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein.
Length = 325
Score = 161 bits (392), Expect = 2e-39
Identities = 93/232 (40%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Frame = +3
Query: 126 HTSPAYKAAESS--LLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 299
+ P A+ SS LL KLR KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 300 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 479
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 480 AKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKI 653
+K L+S +L L A ++ L + LAL IG +GE +L+RA W +
Sbjct: 155 QPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGETMILKRA-AWVKVPSGFYV 213
Query: 654 AGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDIGRQLCQHIVGCAP 794
Y H A GKYGAL+ +Q ++ D+GR+L QH+VG AP
Sbjct: 214 GSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAP 265
>BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongation
factor, mitochondrial protein.
Length = 346
Score = 149 bits (360), Expect = 2e-35
Identities = 97/253 (38%), Positives = 137/253 (54%), Gaps = 30/253 (11%)
Frame = +3
Query: 126 HTSPAYKAAESS--LLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 299
+ P A+ SS LL KLR KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 300 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKF------ 461
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ +
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 462 ---AHTKLQAKGPIT----------KME--LDSEQLGTLHAEGGKK--LSEILALFIGSV 590
A++K+Q P+ +E L+S +L L A ++ L + LAL IG +
Sbjct: 155 QPSAYSKVQWLTPVNLALWEAEAGGSLEGFLNSSELSGLPAGPDREGSLKDQLALAIGKL 214
Query: 591 GENAVLRRAECWKANSEDVKIAGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDI 755
GEN +L+RA W + Y H A GKYGAL+ +Q ++ D+
Sbjct: 215 GENMILKRA-AWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDV 273
Query: 756 GRQLCQHIVGCAP 794
GR+L QH+VG AP
Sbjct: 274 GRRLGQHVVGMAP 286
>Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein.
Length = 715
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein.
Length = 685
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein
protein.
Length = 685
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLREKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLR K +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLR-KLAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AK131308-1|BAD18474.1| 891|Homo sapiens protein ( Homo sapiens
cDNA FLJ16287 fis, clone OCBBF2008144, moderately
similar to Zinc finger protein 91. ).
Length = 891
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -2
Query: 197 CVARFFPEFSKQRRFSCFIRWTCMNSSNQLENHKNTLHSSKSFLC 63
C+AR + Q+ + C + N S L NHK K F C
Sbjct: 596 CLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQC 640
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,153,962
Number of Sequences: 237096
Number of extensions: 2744250
Number of successful extensions: 5724
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5716
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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