Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_G12
(554 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 259 4e-68
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 206 4e-52
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 194 1e-48
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 160 2e-38
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 158 7e-38
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 137 1e-31
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 137 2e-31
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 136 4e-31
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 130 3e-29
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 126 5e-28
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 126 5e-28
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 123 2e-27
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 123 2e-27
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 114 1e-24
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 113 2e-24
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 112 6e-24
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 111 1e-23
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 110 2e-23
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 109 3e-23
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 109 6e-23
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 108 7e-23
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 108 7e-23
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 108 1e-22
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 108 1e-22
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 107 2e-22
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 107 2e-22
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 107 2e-22
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 106 3e-22
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 9e-22
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 105 9e-22
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 104 1e-21
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 104 1e-21
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 104 1e-21
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 104 2e-21
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 103 2e-21
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 103 4e-21
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 103 4e-21
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 103 4e-21
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 102 5e-21
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 102 5e-21
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 102 6e-21
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 102 6e-21
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 101 9e-21
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 101 1e-20
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 101 1e-20
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 101 1e-20
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 101 1e-20
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 101 1e-20
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 101 1e-20
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 101 1e-20
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 100 2e-20
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 100 2e-20
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 100 3e-20
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 100 3e-20
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 100 3e-20
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 100 3e-20
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 100 3e-20
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 99 3e-20
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 99 3e-20
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 100 5e-20
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 100 5e-20
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 99 6e-20
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 99 8e-20
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 99 8e-20
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 99 8e-20
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 99 8e-20
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 98 1e-19
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 98 1e-19
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 98 1e-19
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 98 1e-19
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 98 1e-19
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 98 1e-19
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 98 1e-19
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 97 2e-19
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 97 2e-19
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 97 2e-19
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 97 2e-19
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 97 2e-19
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 97 2e-19
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 97 2e-19
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 97 2e-19
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 97 2e-19
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 97 3e-19
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 97 3e-19
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 97 3e-19
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 96 4e-19
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 96 4e-19
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 96 4e-19
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 96 6e-19
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 96 6e-19
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 95 7e-19
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 95 7e-19
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 95 7e-19
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 95 7e-19
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 95 7e-19
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 95 1e-18
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 95 1e-18
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 95 1e-18
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 95 1e-18
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 94 2e-18
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 94 2e-18
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 94 2e-18
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 94 2e-18
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 94 2e-18
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 94 2e-18
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 93 3e-18
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 93 3e-18
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 93 3e-18
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 93 4e-18
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 93 4e-18
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 93 4e-18
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 93 4e-18
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 93 5e-18
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 93 5e-18
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 92 7e-18
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 92 7e-18
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 92 9e-18
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 92 9e-18
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 92 9e-18
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 92 9e-18
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 92 9e-18
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 92 9e-18
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 92 9e-18
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 92 9e-18
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 91 1e-17
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 91 1e-17
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 91 1e-17
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 91 1e-17
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 91 1e-17
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 91 2e-17
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 91 2e-17
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 91 2e-17
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 91 2e-17
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 91 2e-17
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 91 2e-17
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 91 2e-17
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 91 2e-17
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 91 2e-17
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 90 3e-17
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 90 3e-17
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 90 3e-17
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 90 3e-17
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 90 3e-17
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 90 3e-17
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 90 3e-17
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 90 3e-17
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 90 3e-17
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 90 4e-17
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 90 4e-17
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 90 4e-17
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 89 5e-17
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 89 5e-17
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 89 5e-17
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 89 5e-17
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 89 5e-17
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 89 5e-17
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 89 5e-17
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 89 5e-17
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 89 5e-17
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 89 5e-17
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 89 5e-17
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 89 5e-17
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 89 5e-17
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 89 5e-17
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 89 6e-17
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 89 6e-17
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 89 6e-17
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 89 6e-17
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 89 6e-17
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 89 6e-17
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 89 6e-17
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 89 6e-17
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 89 6e-17
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 89 8e-17
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 89 8e-17
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 89 8e-17
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 89 8e-17
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 89 8e-17
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 88 1e-16
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 88 1e-16
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 88 1e-16
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 88 1e-16
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 88 1e-16
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 88 1e-16
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 88 1e-16
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 88 1e-16
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 88 1e-16
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 88 1e-16
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 87 2e-16
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 2e-16
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 87 2e-16
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 87 2e-16
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 87 2e-16
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 87 2e-16
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 87 3e-16
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 3e-16
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 3e-16
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 87 3e-16
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 87 3e-16
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 87 3e-16
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 87 3e-16
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 87 3e-16
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 87 3e-16
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 87 3e-16
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 87 3e-16
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 87 3e-16
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 87 3e-16
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 86 5e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 86 5e-16
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 86 5e-16
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 86 5e-16
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 86 5e-16
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 86 5e-16
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 86 6e-16
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 86 6e-16
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 86 6e-16
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 86 6e-16
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 85 8e-16
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 85 8e-16
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 85 8e-16
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 85 1e-15
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 85 1e-15
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 85 1e-15
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 85 1e-15
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 85 1e-15
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 85 1e-15
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 85 1e-15
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 85 1e-15
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 85 1e-15
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 85 1e-15
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 85 1e-15
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 85 1e-15
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 1e-15
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 85 1e-15
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 85 1e-15
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 84 2e-15
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 84 2e-15
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 84 2e-15
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 84 2e-15
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 84 2e-15
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 84 2e-15
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 84 2e-15
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 84 2e-15
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 84 2e-15
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 84 2e-15
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 84 2e-15
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 83 3e-15
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 83 3e-15
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 83 3e-15
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 83 3e-15
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 83 3e-15
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 83 3e-15
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 83 3e-15
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 83 3e-15
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 83 4e-15
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 83 4e-15
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 83 4e-15
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 83 4e-15
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 83 4e-15
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 83 4e-15
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 83 4e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 83 4e-15
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 83 4e-15
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 83 4e-15
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 83 6e-15
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 83 6e-15
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 83 6e-15
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 83 6e-15
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 83 6e-15
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 83 6e-15
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 83 6e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 82 7e-15
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 82 7e-15
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 82 7e-15
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 82 7e-15
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 82 7e-15
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 82 7e-15
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 82 7e-15
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 82 7e-15
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 82 7e-15
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 82 7e-15
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 82 7e-15
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 82 7e-15
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 82 1e-14
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 82 1e-14
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 1e-14
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 82 1e-14
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 82 1e-14
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 82 1e-14
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 82 1e-14
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 81 1e-14
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 81 1e-14
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 1e-14
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 1e-14
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 81 1e-14
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 81 1e-14
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 81 1e-14
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 81 1e-14
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 2e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 81 2e-14
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 81 2e-14
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 81 2e-14
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 2e-14
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 81 2e-14
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 81 2e-14
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 81 2e-14
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 80 3e-14
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 80 3e-14
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 80 3e-14
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 80 3e-14
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 80 4e-14
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 80 4e-14
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 80 4e-14
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 80 4e-14
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 80 4e-14
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 80 4e-14
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 80 4e-14
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 80 4e-14
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 80 4e-14
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 79 5e-14
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 79 5e-14
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 79 5e-14
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 79 5e-14
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 79 5e-14
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 79 5e-14
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 79 5e-14
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 79 5e-14
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 79 7e-14
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 79 7e-14
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 79 7e-14
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 79 7e-14
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 7e-14
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 79 9e-14
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 79 9e-14
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 79 9e-14
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 79 9e-14
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 79 9e-14
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 79 9e-14
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 78 1e-13
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 78 1e-13
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 78 1e-13
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 78 1e-13
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 78 1e-13
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 78 1e-13
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 78 2e-13
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 78 2e-13
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 78 2e-13
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 2e-13
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 78 2e-13
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 78 2e-13
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 78 2e-13
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 78 2e-13
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 78 2e-13
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 77 2e-13
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 77 2e-13
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 77 2e-13
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 77 2e-13
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 77 2e-13
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 77 2e-13
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 2e-13
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 77 3e-13
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 77 3e-13
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 77 3e-13
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 77 3e-13
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 77 4e-13
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 77 4e-13
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 77 4e-13
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 77 4e-13
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 77 4e-13
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 77 4e-13
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 77 4e-13
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 76 5e-13
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 76 5e-13
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 76 5e-13
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 76 5e-13
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 76 5e-13
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 76 6e-13
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 76 6e-13
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 76 6e-13
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 76 6e-13
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 76 6e-13
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 76 6e-13
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 76 6e-13
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 76 6e-13
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 75 8e-13
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 75 8e-13
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 75 8e-13
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 75 8e-13
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 75 8e-13
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 75 8e-13
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 75 8e-13
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 75 1e-12
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 1e-12
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 1e-12
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 75 1e-12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 75 1e-12
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 75 1e-12
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 75 1e-12
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 75 1e-12
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 74 2e-12
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 74 2e-12
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 74 2e-12
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 74 2e-12
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 74 2e-12
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 74 2e-12
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 74 3e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 74 3e-12
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 74 3e-12
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 74 3e-12
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 74 3e-12
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 74 3e-12
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 74 3e-12
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 74 3e-12
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 74 3e-12
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 74 3e-12
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 74 3e-12
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 74 3e-12
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 74 3e-12
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 74 3e-12
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 74 3e-12
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 73 3e-12
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 73 3e-12
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 73 3e-12
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 73 3e-12
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 73 3e-12
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 73 3e-12
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 73 3e-12
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 73 3e-12
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 73 3e-12
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 73 5e-12
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 73 5e-12
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 73 5e-12
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 73 5e-12
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 73 5e-12
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 73 6e-12
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 73 6e-12
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 73 6e-12
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 73 6e-12
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 73 6e-12
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 73 6e-12
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 73 6e-12
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 73 6e-12
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 56 7e-12
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 72 8e-12
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 72 8e-12
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 72 8e-12
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 72 8e-12
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 72 8e-12
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 72 8e-12
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 72 8e-12
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 72 8e-12
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 72 8e-12
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 72 8e-12
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 72 8e-12
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 72 8e-12
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 72 8e-12
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 72 8e-12
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 72 8e-12
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 1e-11
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 72 1e-11
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 72 1e-11
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 72 1e-11
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 72 1e-11
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 1e-11
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 72 1e-11
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 72 1e-11
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 72 1e-11
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 71 1e-11
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 71 1e-11
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 71 1e-11
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 71 1e-11
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 71 1e-11
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 71 1e-11
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 71 1e-11
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 71 1e-11
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 71 1e-11
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 259 bits (634), Expect = 4e-68
Identities = 121/161 (75%), Positives = 142/161 (88%)
Frame = +1
Query: 70 MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 249
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 250 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 429
R+I I+KGRDVIAQ+QSGTGKTATFSIS+LQ LD +RETQ LIL+PTRELA QIQK +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 430 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRV
Sbjct: 127 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRV 167
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 206 bits (502), Expect = 4e-52
Identities = 105/161 (65%), Positives = 125/161 (77%)
Frame = +1
Query: 70 MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 249
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 250 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 429
R+I I+KGRDVIAQ+QSGTGKTATFS+S+LQ LD IQ +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-L 105
Query: 430 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRV
Sbjct: 106 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRV 146
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 194 bits (473), Expect = 1e-48
Identities = 91/134 (67%), Positives = 109/134 (81%), Gaps = 1/134 (0%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E++ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
SILQ L+ +ETQ L+L+PTRELA QIQKVILALGD+M CHACIGGTN+ +++KL
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 514 -YGQHVVSGTPGRV 552
H+V GTPGRV
Sbjct: 150 AEAPHIVVGTPGRV 163
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 160 bits (388), Expect = 2e-38
Identities = 76/134 (56%), Positives = 106/134 (79%), Gaps = 3/134 (2%)
Frame = +1
Query: 73 TSSEVSSNR---KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAI 243
T+S V +NR + + D + F+T+E VE+I +FD MG++++LLRGIY Y FEKPSA+
Sbjct: 243 TTSMVPANRGGCRNSAVDDEKLVFETTEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAV 302
Query: 244 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQK 423
QQR++LPI++G DVIAQAQSGTGKT+ F++++ Q +DT+ RE Q LI SPTRELA+Q +K
Sbjct: 303 QQRAVLPIIQGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEK 362
Query: 424 VILALGDFMNVQCH 465
VILA+GD +N+Q H
Sbjct: 363 VILAIGDSVNIQAH 376
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 158 bits (384), Expect = 7e-38
Identities = 74/159 (46%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
Frame = +1
Query: 79 SEVSSNRKILSEDLSNVEFDTSED-VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 255
S + + ++ L + D E+ +E + TF+ + L +LLRGI++YGFE+PSAIQQ++
Sbjct: 27 SFIQNKKEHLKNIMDQQTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKA 86
Query: 256 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 435
I PI+ G+DV+AQAQSGTGKT TF+I LQ +D R+TQV+IL+P RELA QI V+
Sbjct: 87 IKPIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKG 146
Query: 436 LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+G ++N++ CIGGT+ E K G H++ TPGR+
Sbjct: 147 IGQYLNIEAFCCIGGTSTQETREKCKQGVHIIIATPGRL 185
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 137 bits (332), Expect = 1e-31
Identities = 65/143 (45%), Positives = 96/143 (67%)
Frame = +1
Query: 124 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 303
NVE+ T+E+ + TF+SM LR ELLRGI +GF +P +QQR+++P+++GRDV+ Q
Sbjct: 9 NVEWKTNEEPIIQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFR 68
Query: 304 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 483
TGKT S+S+L D ++++ QVLIL TR+L + +I+ALG F+NV HAC G
Sbjct: 69 STGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGN 128
Query: 484 NLGEDIRKLDYGQHVVSGTPGRV 552
++ +DI + G +V GTP RV
Sbjct: 129 SIQDDISVVQQGVQIVLGTPDRV 151
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 137 bits (331), Expect = 2e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 157 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 336
V+ FD M L++ LLRG+Y YGFEKPSAIQQR+ILP +KG DVIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 337 ILQTLDTTLRETQVLILSPTRELATQIQKV 426
ILQ +DT+L+ETQ LIL+PTRELA Q K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 136 bits (328), Expect = 4e-31
Identities = 68/149 (45%), Positives = 101/149 (67%)
Frame = +1
Query: 106 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 285
+SE + +F ++ +EV PT++SM L+ EL+ I G+EKPS IQQR+I I +G+++
Sbjct: 1 MSEVHEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNI 60
Query: 286 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 465
+ Q+Q+G+GKTATFSI L L T + T+++I+SPTRELA Q + + +LG
Sbjct: 61 MFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTR 116
Query: 466 ACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
AC+GG +LG D++ L G H VSGTPGR+
Sbjct: 117 ACVGGNSLGADVKALQKGIHCVSGTPGRI 145
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 130 bits (313), Expect = 3e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E+ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 32 EITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 91
Query: 334 SILQTLDTTLRETQVLILSPTRELATQ 414
SILQ L+ +ETQ L+L+PTRELA Q
Sbjct: 92 SILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 126 bits (303), Expect = 5e-28
Identities = 61/129 (47%), Positives = 84/129 (65%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+ L+ ELL GI+ GFEKPS IQ+ +I + GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+ L + Q LI+ PTRELA Q +V+ LG + C GGTNL +DI +L+ H
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 526 VVSGTPGRV 552
++ GTPGRV
Sbjct: 167 ILVGTPGRV 175
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 126 bits (303), Expect = 5e-28
Identities = 64/129 (49%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ GLR ELL GIYT GFE+PS IQ+++I + GRD++A+A++GTGKTA+F I L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
++T+L Q LIL PTRELA Q +V LG + N+Q GGT L +DI +L H
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVH 157
Query: 526 VVSGTPGRV 552
++ GTPGR+
Sbjct: 158 ILVGTPGRI 166
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 123 bits (297), Expect = 2e-27
Identities = 57/92 (61%), Positives = 75/92 (81%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ +F+ M L + LLRGI+ YGFEKPSAIQQ++I+P +KG DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILA 435
LQ +D +TQ +IL+PTRELA QIQKV+L+
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 123 bits (297), Expect = 2e-27
Identities = 61/137 (44%), Positives = 87/137 (63%)
Frame = +1
Query: 142 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 321
S + + T++ GL+++LL+GIY+ GFE PS IQ+ +I PI+ GRD+ AQAQSGTGKT
Sbjct: 31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTG 90
Query: 322 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 501
F+++ LQ D + TQ+L+L+ TRE+A Q LG FM + GG+ + D
Sbjct: 91 AFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADK 150
Query: 502 RKLDYGQHVVSGTPGRV 552
L+ H+V GTPGRV
Sbjct: 151 VALEKKPHIVVGTPGRV 167
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 114 bits (274), Expect = 1e-24
Identities = 56/130 (43%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 342
+F ++GL DE+L + GF P+ IQ+++I +++G RD++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
+T+D + R TQ LIL+PTRELA Q+ + I ++ + GG ++ IR+L G
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 523 HVVSGTPGRV 552
+V GTPGR+
Sbjct: 123 QIVVGTPGRI 132
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 113 bits (273), Expect = 2e-24
Identities = 56/129 (43%), Positives = 83/129 (64%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF + L +++L+ + GFE+PS IQ ++I +++G+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L R Q L+L+PTRELA Q+ + I +G V+ A GG ++ IR L +G
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 526 VVSGTPGRV 552
VV GTPGR+
Sbjct: 127 VVIGTPGRI 135
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 112 bits (269), Expect = 6e-24
Identities = 56/129 (43%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
+D Q L+L PTRELA Q+ ++ + + + V+ A GGTNL +DI +LD H
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 526 VVSGTPGRV 552
VV TPGR+
Sbjct: 211 VVIATPGRI 219
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 111 bits (266), Expect = 1e-23
Identities = 49/129 (37%), Positives = 82/129 (63%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+FD +GL + + R I +G+E+P+ +Q + P+ G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+ R L++ PTRELA Q+ + AL ++ A GG ++GE ++KL+ G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 526 VVSGTPGRV 552
++ GTPGR+
Sbjct: 141 IIVGTPGRI 149
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 110 bits (265), Expect = 2e-23
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +1
Query: 106 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 282
++ +LS E + +++ TF MGL ++L G+ GF KPS IQ +SI P+ + G D
Sbjct: 5 IAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI-PLGRCGFD 63
Query: 283 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQ 459
+I +A+SGTGKTA F I L+ +D + QV+IL+PTRE+A QI++VI +LG + ++
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 460 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ IGG + D +KL H+ G PGRV
Sbjct: 124 VESFIGGVAMDIDRKKLS-NCHIAIGAPGRV 153
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 109 bits (263), Expect = 3e-23
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F S+GL LLR I G+E+PS IQ++SI +++G+DV+ AQ+GTGKTA F++ +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 525
+RE QVL+L+PTRELA Q+ + + NV+ + GG++ G R L G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 526 VVSGTPGRV 552
V GTPGRV
Sbjct: 128 WVVGTPGRV 136
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 109 bits (261), Expect = 6e-23
Identities = 53/146 (36%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +1
Query: 118 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 297
+++ + +T + E + F S+GL + LL + + GF + IQ +I P++ G+DV+ +A
Sbjct: 1 MTDQKTETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEA 59
Query: 298 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 474
Q+GTGKTA F + L +DT++++ Q+++L+PTRELA Q+ + I + G D ++
Sbjct: 60 QTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY 119
Query: 475 GGTNLGEDIRKLDYGQHVVSGTPGRV 552
GG + G ++L+ G VV GTPGR+
Sbjct: 120 GGQSYGPQFQQLERGAQVVVGTPGRL 145
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 108 bits (260), Expect = 7e-23
Identities = 50/129 (38%), Positives = 79/129 (61%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL D LL+ + + GFE+ + IQ +I ++G+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+DT Q ++++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 526 VVSGTPGRV 552
++ GTPGR+
Sbjct: 123 IIVGTPGRI 131
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 108 bits (260), Expect = 7e-23
Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL+ +L + G+EKPS IQ I ++ GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 522
LD L+ Q+L+L+PTRELA Q+ + + M V A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 523 HVVSGTPGRV 552
+V GTPGR+
Sbjct: 127 QIVVGTPGRL 136
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 108 bits (259), Expect = 1e-22
Identities = 57/128 (44%), Positives = 82/128 (64%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD GL+D +L+GI GF PS +Q +SI I++G+D+IAQAQ+GTGKTA F+I IL T
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
L+ ++ + LI++PTRELA QI + IL LG F ++ GG ++ L+
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKA 165
Query: 529 VSGTPGRV 552
+ TPGR+
Sbjct: 166 MIATPGRL 173
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 108 bits (259), Expect = 1e-22
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +1
Query: 163 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 342
PTF + L +L + T G+E PS IQ ++I +++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 9 PTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLL 68
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYG 519
LD RE QVL+L+PTRELA Q+ + G ++ + GG E + L G
Sbjct: 69 SRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRG 128
Query: 520 QHVVSGTPGRV 552
V+ GTPGRV
Sbjct: 129 AQVIVGTPGRV 139
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 107 bits (257), Expect = 2e-22
Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD +GL++ LL+ I GFE+PS IQ SI ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 349 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
D + + + LIL+PTRELA Q+ + ++ LG + GG + IR L G
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 523 HVVSGTPGRV 552
+V GTPGRV
Sbjct: 126 DIVVGTPGRV 135
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 107 bits (256), Expect = 2e-22
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = +1
Query: 151 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 330
+E + +F + L +ELL+ I GF +PS IQ +I +++GRDVI QAQ+GTGKTA F
Sbjct: 1 MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFG 60
Query: 331 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRK 507
+ +LQ +D R Q L+L PTRELA Q+ + AL + V+ + GG +
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASA 120
Query: 508 LDYGQHVVSGTPGRV 552
L G VV GTPGR+
Sbjct: 121 LRRGAQVVVGTPGRI 135
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 107 bits (256), Expect = 2e-22
Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 3/151 (1%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 282
++DLS+ T + + P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 43 AQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 101
Query: 283 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 459
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 460 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
CH IGGT L +D +L H+ G+PGR+
Sbjct: 162 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRI 191
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 106 bits (255), Expect = 3e-22
Identities = 53/89 (59%), Positives = 65/89 (73%)
Frame = +1
Query: 199 LRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV 378
L + G EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L+ L + Q
Sbjct: 24 LLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQA 83
Query: 379 LILSPTRELATQIQKVILALGDFMNVQCH 465
L+L+PTRELA QI+KV+ ALGD +NV+ +
Sbjct: 84 LVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 105 bits (251), Expect = 9e-22
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +1
Query: 202 RGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 381
+ + +YGFEKPS IQQ I+PI+KG+D IAQAQSGTGKTATFSI+ LQ +DT+ TQ L
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 382 ILSPTRELATQ-IQKVILALG 441
IL+PTRELA Q I ++ LG
Sbjct: 107 ILAPTRELAQQTITRIFFILG 127
Score = 52.4 bits (120), Expect = 7e-06
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +1
Query: 418 QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+KVI+ LG+F+ V +AC GGT+ ED ++L G VV GTPGRV
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRV 230
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 105 bits (251), Expect = 9e-22
Identities = 58/164 (35%), Positives = 93/164 (56%)
Frame = +1
Query: 61 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 240
+ ++++ E S +K S S+ +S + +F L ELL I + + +P+
Sbjct: 64 VSELSNKEDLSTKKDQSSASSSSSTSSSSSPPSVQSFTEFDLVPELLESIQSLKYTQPTP 123
Query: 241 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 420
IQ +I ++G+D++ A++G+GKTA F+I ILQTL T + L+L+PTRELA QI+
Sbjct: 124 IQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIK 183
Query: 421 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ ALG M ++ IGG ++ E R L HV+ TPGR+
Sbjct: 184 ETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRL 227
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 104 bits (250), Expect = 1e-21
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 282
+ D+ T + V P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 102
Query: 283 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 459
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 460 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
CH IGGT L +D +L H+ G+PGR+
Sbjct: 163 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRI 192
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 104 bits (250), Expect = 1e-21
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISIL 342
TFD +GL LL+ I GFE PS IQ+ +I ++ + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 343 QTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
Q +D + + TQ LI++PTREL QI ++ L V+ A GG+N+ E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 520 QHVVSGTPGRV 552
+V TPGR+
Sbjct: 122 AQIVVATPGRM 132
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 104 bits (250), Expect = 1e-21
Identities = 57/132 (43%), Positives = 78/132 (59%)
Frame = +1
Query: 157 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 336
V PTF S+GL EL + T G++ P+AIQ + ++GRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 337 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
ILQ L + LIL+PTREL QI + ILA+G + V +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 517 GQHVVSGTPGRV 552
HVV G+PGRV
Sbjct: 169 KPHVVVGSPGRV 180
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 104 bits (249), Expect = 2e-21
Identities = 53/129 (41%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ L+ ELL GI+ G+E PS+IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
LD Q +++ PTRELA Q+ ++ + + M + A GGTNL +D+ +LD H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 526 VVSGTPGRV 552
VV TPGR+
Sbjct: 203 VVIATPGRI 211
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 103 bits (248), Expect = 2e-21
Identities = 55/133 (41%), Positives = 79/133 (59%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E + F+ + + +E+ + I GFE+PS IQ ++I I+ G DVI QAQ+GTGKTA F I
Sbjct: 3 EAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGI 62
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
+++ + T R Q LIL+PTRELA Q+ I L ++ GG ++ I+ L
Sbjct: 63 PVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALK 121
Query: 514 YGQHVVSGTPGRV 552
G VV GTPGR+
Sbjct: 122 QGVQVVIGTPGRI 134
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 103 bits (246), Expect = 4e-21
Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 345
F M ++ E+L+ + GFEKP+ IQ+ ++LP +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
LD ++ Q L+++PTRELA QI + LG + + +GG + + L+ G +
Sbjct: 62 NLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVN 121
Query: 526 VVSGTPGRV 552
+V TPGR+
Sbjct: 122 IVVATPGRL 130
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 103 bits (246), Expect = 4e-21
Identities = 50/129 (38%), Positives = 78/129 (60%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL E+++ I GFE+ + IQ ++I ++ +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
++ Q L+++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 526 VVSGTPGRV 552
V+ GTPGR+
Sbjct: 123 VIVGTPGRI 131
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 103 bits (246), Expect = 4e-21
Identities = 53/135 (39%), Positives = 85/135 (62%), Gaps = 6/135 (4%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+FDS+GL ++LR + G+ +P+ IQQ++I +++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 346 TLDTT------LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 507
L T R + LIL+PTRELA QI + + ++N++ GG ++ + K
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 508 LDYGQHVVSGTPGRV 552
L G V+ TPGR+
Sbjct: 122 LRGGVDVLVATPGRL 136
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 102 bits (245), Expect = 5e-21
Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL E++ I + G+ + + IQ+++I ++ G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 525
+D ++ +TQ LIL PTRELA Q+ + L F ++ A GG ++ IR L G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 526 VVSGTPGRV 552
+V GTPGR+
Sbjct: 123 IVVGTPGRI 131
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 102 bits (245), Expect = 5e-21
Identities = 56/129 (43%), Positives = 76/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+ +GL L+ GF+ PS IQ +I I+KGRD+IA A++G+GKTA+F+I IL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L +IL+PTRELA QI + A+G MNV C IGG + LD H
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124
Query: 526 VVSGTPGRV 552
++ TPGR+
Sbjct: 125 IIVATPGRL 133
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 102 bits (244), Expect = 6e-21
Identities = 49/129 (37%), Positives = 77/129 (59%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F +G+ E + + GF P+ IQ ++I ++ GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
LD + Q ++L+PTRELA Q+ + ++ A GG ++ + +L G H
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 526 VVSGTPGRV 552
+V GTPGRV
Sbjct: 124 IVVGTPGRV 132
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 102 bits (244), Expect = 6e-21
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Frame = +1
Query: 130 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 309
+ D +EDV F + LR ELLR + G+E+P+ IQ+ ++ P+V GRD++ QA +GT
Sbjct: 49 DIDPAEDVA---GFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGT 105
Query: 310 GKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 480
GKTA F++ +L L T Q L+L PTRELA Q+ + I G + + GG
Sbjct: 106 GKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGG 165
Query: 481 TNLGEDIRKLDYGQHVVSGTPGR 549
+G +R L G VV TPGR
Sbjct: 166 APIGRQVRALVQGVDVVVATPGR 188
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 101 bits (243), Expect = 9e-21
Identities = 51/128 (39%), Positives = 79/128 (61%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL LL+ + GFE P+ IQ+ +I I++G +++ QA +GTGKTA + + +LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ ++ QVLI++PTRELA Q+ + LG ++ V+ A GG + IR L G V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 529 VSGTPGRV 552
+ GTPGR+
Sbjct: 123 IVGTPGRI 130
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 101 bits (242), Expect = 1e-20
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL +++ + G+E P+ IQQ +I I+ GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDIRKLDYG 519
+D R+ QVL+L+PTRELA Q+ + A + ACI GG G IR L G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 520 QHVVSGTPGRV 552
VV GT GRV
Sbjct: 129 VKVVVGTTGRV 139
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 101 bits (242), Expect = 1e-20
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL+ +L IYT G++KP+ IQ +S+ I++G+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
L ++ QVLIL+P REL QI + + LG + N + GG L ++K +G
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHGAQ 125
Query: 526 VVSGTPGRV 552
V+S TPGR+
Sbjct: 126 VISATPGRL 134
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 101 bits (242), Expect = 1e-20
Identities = 50/129 (38%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+S+GL D L + + G+E + IQ +I +++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
+D +R Q L+L PTRELA Q+ + + G M ++ + GG ++ + ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 526 VVSGTPGRV 552
+V TPGR+
Sbjct: 131 IVVATPGRL 139
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 101 bits (242), Expect = 1e-20
Identities = 50/140 (35%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTG 312
D + + + TF+ +GL+ ELL+G+Y G+ KPS IQ+ ++ I++ ++IAQ+QSGTG
Sbjct: 61 DPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTG 120
Query: 313 KTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 492
KTA F++ +L +D ++ Q + +SPT+ELA Q +VI +G F N++ I +
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVP 180
Query: 493 EDIRKLDYGQHVVSGTPGRV 552
+++ V+ GTPG++
Sbjct: 181 KNVT-----NQVIIGTPGKI 195
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 101 bits (241), Expect = 1e-20
Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F SMGL + L G+ G+ P+ IQ+++I I++G D+IA A++G+GKTA + + I+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 349 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L+T E + LI+ PTRELA Q KV LG N++ IGG+ L + L G
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 526 VVSGTPGRV 552
++ TPGR+
Sbjct: 135 IIVATPGRL 143
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 101 bits (241), Expect = 1e-20
Identities = 50/131 (38%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 342
TF +GL LL+ + PS IQQ++I I+ ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYG 519
Q ++ +L++TQVL+L PTREL Q+ K + + + + A GG + E I+KL+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 520 QHVVSGTPGRV 552
+H++ TPGR+
Sbjct: 122 KHILVATPGRL 132
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 101 bits (241), Expect = 1e-20
Identities = 53/139 (38%), Positives = 80/139 (57%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 315
+T+ED E +F + L EL++ + KP+ IQ ++I P ++G D+I AQ+G+GK
Sbjct: 73 NTNED-ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 316 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
TA F+I IL L IL+PTRELA QI++ +LG M V+ +GG N+ +
Sbjct: 132 TAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
Query: 496 DIRKLDYGQHVVSGTPGRV 552
R L H++ TPGR+
Sbjct: 192 QARDLMRKPHIIIATPGRL 210
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 100 bits (240), Expect = 2e-20
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISILQ 345
F+ +GL + LLR I GFE P+ +Q+++I + + K D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 522
+D R TQ LILSPTREL QI + + + A GG ++ E R + G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 523 HVVSGTPGRV 552
++ TPGR+
Sbjct: 124 QIIVATPGRM 133
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 100 bits (240), Expect = 2e-20
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL LL+ + + G+E P+ IQ ++I+ ++ G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 522
+DTT + Q L+L PTRELA Q+ + + N GG ++ +R L
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 523 HVVSGTPGRV 552
V+ GTPGRV
Sbjct: 126 QVIVGTPGRV 135
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 100 bits (239), Expect = 3e-20
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL +L+ + G+EKPS IQ+++I P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 346 TLDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L + R + LIL+PTRELA QIQ+ A G + ++ GG + KL
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 517 GQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 122 GVDILVATPGRL 133
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 100 bits (239), Expect = 3e-20
Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F S+ L ++L++ + + G+E+ + IQ+ S+ I+ G+D+IAQA++GTGKTA F + +L
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
L QVLIL PTREL Q+ K I L M N++ + GG ++ + +G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 526 VVSGTPGRV 552
+V GTPGR+
Sbjct: 126 IVVGTPGRI 134
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 100 bits (239), Expect = 3e-20
Identities = 56/149 (37%), Positives = 88/149 (59%)
Frame = +1
Query: 106 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 285
L +S V D + + V F MGL DELL+ IY GFEKPS IQ+ +I I++G +V
Sbjct: 32 LDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNV 91
Query: 286 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 465
+ Q++SGTGKT ++ +L R TQV++++PTREL+TQ+ +VI L + ++
Sbjct: 92 VVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLGIKVF 150
Query: 466 ACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ + + + I G+ VV G+PG +
Sbjct: 151 SAL-KNKITDSI-----GEEVVVGSPGTI 173
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 100 bits (239), Expect = 3e-20
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 345
F S+ L +L G+ GF++PS IQ ++I P+ + G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 86
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 522
+L TQVL+L+PTRE+A QI V++A+G M ++CH IGG + +D + L
Sbjct: 87 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLK-KC 145
Query: 523 HVVSGTPGRV 552
H+ G+PGR+
Sbjct: 146 HIAIGSPGRI 155
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 100 bits (239), Expect = 3e-20
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 349 LDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L +TL T+ LILSP RELA Q KV+ +++ A +GG +L E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 523 HVVSGTPGR 549
+V TPGR
Sbjct: 191 DIVVATPGR 199
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 99 bits (238), Expect = 3e-20
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
I F + + L + + F PS IQ ++I I++GRD IA AQ+GTGKTA F++ I
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 516
LQ L + TQ LIL+PTRELA Q+ + L + NV GG G +++L
Sbjct: 65 LQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRS 124
Query: 517 GQHVVSGTPGRV 552
G VV GTPGR+
Sbjct: 125 GAQVVVGTPGRI 136
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 99 bits (238), Expect = 3e-20
Identities = 58/161 (36%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Frame = +1
Query: 73 TSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 252
+++E S+ +E + V D ++ E FD G + LL+ + G+ PS IQ+
Sbjct: 42 STAEPSTTEASTTEVTAEVTADEAKS-EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKA 100
Query: 253 SILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVIL 432
+ ++ GRD++ QAQ+GTGKTA F++ +L+ L++ + QVL+L+PTRELA Q+
Sbjct: 101 AFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFK 160
Query: 433 A-LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
A +++ A GGT+ I L G VV GTPGRV
Sbjct: 161 AYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRV 201
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 99.5 bits (237), Expect = 5e-20
Identities = 56/128 (43%), Positives = 78/128 (60%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F SMGL+ +LL+ I GFEKP+ IQ +SI + G D++ QAQ+GTGKTA+F I IL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ Q L+L PTRELA Q+ + I +L M +Q A GG ++ +R L +
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 529 VSGTPGRV 552
+ GTPGR+
Sbjct: 125 IVGTPGRL 132
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 99.5 bits (237), Expect = 5e-20
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQ 345
F MGL D +L I G+E P+ IQ++ I ++ G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
LD + Q L+L+PTRELA Q+ I +L + GG ++G IR L
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 526 VVSGTPGRV 552
+V GTPGR+
Sbjct: 124 LVVGTPGRI 132
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 99.1 bits (236), Expect = 6e-20
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +1
Query: 163 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 342
P F + L + LLR + G+E PS IQ +I ++ RDV+ QAQ+GTGKTA+F++ IL
Sbjct: 7 PLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPIL 66
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 519
+D Q L+L+PTRELA Q+ + ++ GG + G + L G
Sbjct: 67 ARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRG 126
Query: 520 QHVVSGTPGRV 552
HVV GTPGRV
Sbjct: 127 VHVVVGTPGRV 137
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 98.7 bits (235), Expect = 8e-20
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F ++ L L GI G+ + +Q +S+ PI++G DVIAQA +G+GKTA F + +LQ
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLD-YGQ 522
LD L Q L+L PTRELA Q+ K + L N++ GG LG + L+ +
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 523 HVVSGTPGRV 552
HVV GTPGR+
Sbjct: 148 HVVVGTPGRI 157
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 98.7 bits (235), Expect = 8e-20
Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Frame = +1
Query: 142 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 321
+EDV P F +GL + ++R I G+E P+ IQ ++I ++KG DV+ AQ+GTGKTA
Sbjct: 284 AEDVSDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTA 343
Query: 322 TFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 492
+F++ +LQ L R + LIL PTRELA Q+ + G ++ + IGG ++
Sbjct: 344 SFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMA 403
Query: 493 EDIRKLDYGQHVVSGTPGRV 552
E L+ G V+ TPGR+
Sbjct: 404 EQRDVLNRGVDVLIATPGRL 423
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 98.7 bits (235), Expect = 8e-20
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F ++G+ +L I G+E+PS IQ ++I I+ G D+I QAQ+GTGKTA F++ +L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
+D RE Q+LIL+PTRELA Q+ + V A GG +G ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 526 VVSGTPGRV 552
++ TPGR+
Sbjct: 145 ILVATPGRL 153
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 98.7 bits (235), Expect = 8e-20
Identities = 62/158 (39%), Positives = 94/158 (59%), Gaps = 6/158 (3%)
Frame = +1
Query: 91 SNRKILSE-DLSNVEFDTS--EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSIL 261
S RK L E D NV S + + + +F+ + L+ ELL GI + GF KPS+IQ+R++
Sbjct: 21 SLRKTLVETDPINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALP 80
Query: 262 PIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 435
+++ +++IAQ+QSGTGKTATF +++L +D Q L ++PTREL QI +V +
Sbjct: 81 MLLENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAII 140
Query: 436 LGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 546
+ FM NV+ I G L DI + ++ GTPG
Sbjct: 141 MSKFMNNVKITCAIKG--LSPDILEGQINSQIIIGTPG 176
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 98.3 bits (234), Expect = 1e-19
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = +1
Query: 157 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 336
+I +FD +GL L+ G+ G KP+ IQ ++I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 337 ILQTLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKL 510
I Q +DT+ RE Q +IL+PT ELA QI K I L+ ++V IG N+ I KL
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 511 DYGQHVVSGTPGRV 552
HV+ G+ GR+
Sbjct: 121 KEKPHVIVGSSGRI 134
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 98.3 bits (234), Expect = 1e-19
Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 145 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 324
ED + + TF S+GL +E+L + GF P+ IQ +I P+++ RDV+ AQ+GTGKTA
Sbjct: 40 EDTDTV-TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAA 98
Query: 325 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDI 501
F + +L +D R Q L+L+PTRELA Q + I + GG+ G I
Sbjct: 99 FGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQI 158
Query: 502 RKLDYGQHVVSGTPGRV 552
L G VV GTPGRV
Sbjct: 159 GALKRGAQVVVGTPGRV 175
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 98.3 bits (234), Expect = 1e-19
Identities = 50/128 (39%), Positives = 76/128 (59%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F L DELL+ I FE P+ +QQ+ I I++ +D+I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+D + Q L+L PTRELA Q+++ + +G F ++ A G ++L HV
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHV 125
Query: 529 VSGTPGRV 552
V GTPGR+
Sbjct: 126 VVGTPGRI 133
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 98.3 bits (234), Expect = 1e-19
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F +GL +L + G+E PS IQ +SI ++ G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 522
+D + E Q+L+L+PTRELA Q+ + F N GG + IR L G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 523 HVVSGTPGRV 552
V+ GTPGR+
Sbjct: 145 QVIVGTPGRM 154
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 98.3 bits (234), Expect = 1e-19
Identities = 59/134 (44%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI--VKGRDVIAQAQSGTGKTATFSI 333
+ FD M L LL+G+Y+YGF PS IQ +I I R VIAQAQSGTGKT FSI
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIR-K 507
+L +D + + TQ L+L+PTRELATQI V +G + IGG D + +
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQAR 209
Query: 508 LDYGQHVVSGTPGR 549
H+ TPGR
Sbjct: 210 AASHPHICICTPGR 223
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 97.9 bits (233), Expect = 1e-19
Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F SMGL EL++GI G++ P+ IQ+++I I++GRDV+A A++G+GKTA F I + +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 349 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L + + LILSPTRELA Q K I LG FM ++ +GG ++ +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 523 HVVSGTPGR 549
V+ TPGR
Sbjct: 161 DVIVATPGR 169
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 97.9 bits (233), Expect = 1e-19
Identities = 49/128 (38%), Positives = 75/128 (58%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + ++ R + GFE + IQ ++ + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
L+ R Q LI+ PTREL Q+ + I +G +M V+ A GG ++G I +L G HV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 529 VSGTPGRV 552
+ TPGR+
Sbjct: 125 IVATPGRL 132
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 97.9 bits (233), Expect = 1e-19
Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Frame = +1
Query: 151 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 330
+E TF + +ELL+ I GFE+P+ IQ +I I+ G+DV QAQ+GTGKTA F
Sbjct: 1 MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG 60
Query: 331 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRK 507
I I++ LD + Q L+LSPTRELA Q + L + + GG + +R
Sbjct: 61 IPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA 120
Query: 508 LDYGQHVVSGTPGRV 552
L VV GTPGRV
Sbjct: 121 LKGTVQVVIGTPGRV 135
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 97.5 bits (232), Expect = 2e-19
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F+ L+ +LLR + GFE+PS +Q + I + G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ- 522
L + L+L TRELA QI+ LG F N + A GG DI L +
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 523 HVVSGTPGR 549
H++ TPGR
Sbjct: 159 HILVATPGR 167
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 97.5 bits (232), Expect = 2e-19
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 267
S+ LS+VE DT E V F SMGL + +G+ G++ P+ IQ+++I I
Sbjct: 12 SDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVI 71
Query: 268 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 441
+ G+DV+A A++G+GKTA F I + + L +T + LILSPTRELA Q K LG
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELG 131
Query: 442 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
F ++ +GG ++ + L ++ GTPGR+
Sbjct: 132 KFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRL 168
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 97.5 bits (232), Expect = 2e-19
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL D +++ + G+E PS IQ +I ++ GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILA-LGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+ QVL+L+PTRELA Q+ + + GG + G+ + L G H
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 526 VVSGTPGRV 552
V+ GTPGRV
Sbjct: 137 VIVGTPGRV 145
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 97.5 bits (232), Expect = 2e-19
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+FD + L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 346 TLDT--TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
LD+ R+ Q +++ PTRELA Q+ L + + GG N+ +R+L+ G
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENG 164
Query: 520 QHVVSGTPGRV 552
+V GTPGRV
Sbjct: 165 TQLVVGTPGRV 175
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSIS 336
+ F+S GL ++ + GF P+ IQ++++ ++ G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 337 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
+++ +D+T+++TQ L+LSPTRELA Q+ + + LG V+ GG + I +
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 517 GQHVVSGTPGRV 552
G H+V TPGR+
Sbjct: 163 GAHIVVATPGRL 174
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 97.5 bits (232), Expect = 2e-19
Identities = 44/128 (34%), Positives = 79/128 (61%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + L ++R ++ GFE+ + IQ+++I ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ T + Q L++ PTRELA Q+ + + +G ++ A GG + ++ L+ H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 529 VSGTPGRV 552
V GTPGR+
Sbjct: 124 VVGTPGRL 131
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 97.1 bits (231), Expect = 2e-19
Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F SMGL ++RGI G++ P+ IQ+++I + GRDV+A A++G+GKTA F I + +
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 349 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L T +T + LILSPTRELA Q Q+ I +G F ++ +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 523 HVVSGTPGR 549
++ TPGR
Sbjct: 160 DIIVATPGR 168
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 97.1 bits (231), Expect = 2e-19
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
I +F + LR LL + G+E PS IQ I ++ G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 516
L LD ++ QVL+L+PTRELA Q+ + + GG ++ +R+L
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 517 GQHVVSGTPGRV 552
G HV+ GTPGRV
Sbjct: 163 GAHVIVGTPGRV 174
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 97.1 bits (231), Expect = 2e-19
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F+S ++ G+ G+++P+ IQ ++I PI+ G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 346 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
+ +T R + L+++PTRELA QI +LG ++ + GG N+ + IR+L G
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 523 HVVSGTPGRV 552
VV PGR+
Sbjct: 122 DVVVACPGRL 131
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 96.7 bits (230), Expect = 3e-19
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + L +L + GF P+ IQ +I +++GRD + +AQ+GTGKTA FS+ +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L+ + + Q ++++PTRELA Q+ I LG + ++ GG ++ + +R L G H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 526 VVSGTPGRV 552
+V GTPGRV
Sbjct: 148 IVVGTPGRV 156
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 96.7 bits (230), Expect = 3e-19
Identities = 49/131 (37%), Positives = 75/131 (57%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ +F + L++ + +G++ S IQ +++P++KGRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
L ++ Q LIL PTREL+ QI+ V L + +C GG LGED++ L
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 520 QHVVSGTPGRV 552
H + GTPGRV
Sbjct: 129 FHGIVGTPGRV 139
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 96.7 bits (230), Expect = 3e-19
Identities = 51/142 (35%), Positives = 86/142 (60%)
Frame = +1
Query: 127 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 306
VE D +D + PTF+ +G+ EL R G+++P+ IQ +I + G+D+I A++G
Sbjct: 30 VEEDDDKDDDT-PTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 307 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 486
+GKTA F+I ILQ L + LIL+PTREL+ QI++ +++LG + + +GG +
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 487 LGEDIRKLDYGQHVVSGTPGRV 552
+ +L H++ G+PGR+
Sbjct: 149 MVSQALQLSKKPHIIVGSPGRI 170
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 96.3 bits (229), Expect = 4e-19
Identities = 42/129 (32%), Positives = 80/129 (62%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+ L +++L+ + + G+ PS +Q+ I ++KG++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
++ Q LI+ PTRELA Q++ I +G V+C A G ++ + I +L H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 526 VVSGTPGRV 552
+V TPGR+
Sbjct: 124 IVVATPGRI 132
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 96.3 bits (229), Expect = 4e-19
Identities = 48/129 (37%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ +GL + +L + + G+E PS IQ++ I ++ +D+I QAQ+GTGKTA F + +L
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
++ + Q+LIL+PTRELA Q+ + + M GG + +R L G H
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 526 VVSGTPGRV 552
+ GTPGRV
Sbjct: 134 AIVGTPGRV 142
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 96.3 bits (229), Expect = 4e-19
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Frame = +1
Query: 115 DLSNVEFDTSEDVEV----IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 282
D + T +D+++ + F + GL++ELLR + GFE P+ +Q S+ + G
Sbjct: 53 DFKEEQQPTGKDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQ 112
Query: 283 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 462
+I QA++GTGKTA F +++L T++T + + L+++ TRELA Q + L LG FM
Sbjct: 113 LICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVK 172
Query: 463 HACI--GGTNLGEDIRKLD-YGQHVVSGTPGRV 552
C GG + +I+ ++ +V GTPGR+
Sbjct: 173 VECFYGGGEPVSVNIQTIETVKPQIVVGTPGRL 205
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 95.9 bits (228), Expect = 6e-19
Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSIS 336
+ F+ +GL LL G+ GFE P+ IQQ+SI ++K D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 337 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLD 513
+L +D RE Q LIL+PTRELA QI + + + + GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 132 RGAQIIVATPGRL 144
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 95.9 bits (228), Expect = 6e-19
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+ +GL + +L+ + GFE PS IQQ I ++ G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVI-LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
+D + + Q+L+++PTRELA Q+ L + + GG +R L G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 523 HVVSGTPGRV 552
VV GTPGR+
Sbjct: 126 QVVVGTPGRI 135
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 95.5 bits (227), Expect = 7e-19
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 342
+F S+ L D++ +G+ GF+KPS IQ ++I P+ + G D+I +++SGTGKT FS L
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAI-PLGRCGFDLIVKSKSGTGKTLVFSTIAL 83
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYG 519
+T++T QVLIL PTRE+A QI+ V+ ++G +N ++ + IGG L +D++K
Sbjct: 84 ETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKK-SSK 142
Query: 520 QHVVSGTPGRV 552
H+ G PGRV
Sbjct: 143 CHIAVGAPGRV 153
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 95.5 bits (227), Expect = 7e-19
Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL +E+L+ + G E+P+ IQ+++I I+KG++VI +A++GTGKT + + I++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
+D + E Q +ILSPT EL QI V+ L G + +G N+ + KL
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 523 HVVSGTPGRV 552
H++ GT GR+
Sbjct: 124 HILVGTTGRI 133
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 95.5 bits (227), Expect = 7e-19
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Frame = +1
Query: 157 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 336
++ +FD + + ++ G+ G + P+AIQ+ +I +K +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 337 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGD--FMNVQCHACIGGTNLGEDIRKL 510
I Q +D++ RETQ LIL+PT EL QI K I L + + IG N+ I KL
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 511 DYGQHVVSGTPGRV 552
H++ G+ GRV
Sbjct: 121 KEKPHIIVGSTGRV 134
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 95.5 bits (227), Expect = 7e-19
Identities = 53/137 (38%), Positives = 82/137 (59%), Gaps = 4/137 (2%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E +PTF+ + L LL+ + GF +P+ IQ ++I + G+D++A A +G+GKTA F +
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 334 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDI 501
+L+ L D+ R +VLIL PTRELA Q Q V+ L F N+ +GG +N +++
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEV 306
Query: 502 RKLDYGQHVVSGTPGRV 552
+L VV TPGR+
Sbjct: 307 -ELRKSPDVVIATPGRL 322
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 95.5 bits (227), Expect = 7e-19
Identities = 45/129 (34%), Positives = 75/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF L +L++ I GFE+ + IQ ++I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
++ Q ++++PTRELA Q+ + + +G + GG ++G IR L +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 526 VVSGTPGRV 552
++ GTPGR+
Sbjct: 124 IIVGTPGRL 132
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 95.1 bits (226), Expect = 1e-18
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP--IVKGRDVIAQAQSGTGKTATFSISIL 342
F+ GL +E+L I G+EKP+ IQ + +LP + +D+IAQAQ+GTGKTA F I +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQ-KIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLL 78
Query: 343 QTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
+ +D + + +I++PTRELA QI + + +L V+ GG +L + + L+ G
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 520 QHVVSGTPGRV 552
+V GTPGR+
Sbjct: 139 VDIVVGTPGRI 149
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 95.1 bits (226), Expect = 1e-18
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Frame = +1
Query: 151 VEVIP---TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 321
VE+ P F +GL D L + G+ +P+ IQ +++ ++ GRDV AQ+GTGKTA
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTA 185
Query: 322 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 501
F++ IL L R + L+L PTRELA Q+++ + ++ GG G+
Sbjct: 186 AFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQR 245
Query: 502 RKLDYGQHVVSGTPGRV 552
L G VV+ TPGR+
Sbjct: 246 EDLQRGVDVVAATPGRL 262
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 95.1 bits (226), Expect = 1e-18
Identities = 55/164 (33%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Frame = +1
Query: 67 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 246
K S + S+ + L++++ D + + +FD +GL ELL+GIY F+KPS IQ
Sbjct: 60 KQEDSNLISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQ 119
Query: 247 QRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 420
+R++ ++ R++IAQ+QSGTGKTA FS+++L ++ Q + L+P+RELA Q
Sbjct: 120 ERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTL 179
Query: 421 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+V+ +G F + + + E ++++ V+ GTPG V
Sbjct: 180 EVVQEMGKFTKITSQLIV--PDSFEKNKQIN--AQVIVGTPGTV 219
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 95.1 bits (226), Expect = 1e-18
Identities = 50/145 (34%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
Frame = +1
Query: 118 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIA 291
L++++ D + + + +F + L ++L++GI GF+KPS IQ++++ ++ R++I
Sbjct: 133 LADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIG 192
Query: 292 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 471
Q+QSGTGKTA F++++L +D T+ Q + ++P+RELA QIQ+VI +G F V
Sbjct: 193 QSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLA 252
Query: 472 IGGTNLGEDIRKLDYGQHVVSGTPG 546
I G+ R + ++ GTPG
Sbjct: 253 IPGS----WSRNSRIDKQILIGTPG 273
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 94.7 bits (225), Expect = 1e-18
Identities = 50/134 (37%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S+GL D LLR + ++ P+ +Q ++I ++ G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 346 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 510
L + +VL+L PTRELA Q+ + +A G ++++ A GG ++ + KL
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 511 DYGQHVVSGTPGRV 552
G V+ TPGR+
Sbjct: 122 RKGVDVLVATPGRL 135
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 94.7 bits (225), Expect = 1e-18
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Frame = +1
Query: 145 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 324
++ V+ F ++GL + LLR I +E P+ IQ RSI +++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 325 FSISILQTLDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 489
F + IL + R + L+L+PTRELATQI G F IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 490 GEDIRKLDYGQHVVSGTPGRV 552
G R+++ G ++ TPGR+
Sbjct: 171 GPQARRMESGVDLLVATPGRL 191
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 94.7 bits (225), Expect = 1e-18
Identities = 52/133 (39%), Positives = 73/133 (54%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 45 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 102
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
ILQ LD E Q L+L PT +LA + Q VI LG F++ + HA GGT+ ED + L
Sbjct: 103 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILS 162
Query: 514 YGQHVVSGTPGRV 552
G V GTP V
Sbjct: 163 TGVQVAVGTPCHV 175
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F+ M L +L + F P+ IQ ++I +++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 522
+D ++++TQVL+++PTRELA Q+ + + M V GG G ++ L G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 523 HVVSGTPGRV 552
+V GTPGR+
Sbjct: 129 AIVVGTPGRL 138
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 94.3 bits (224), Expect = 2e-18
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+S E+LR I G++ + +QQ++I I +G DV+A AQ+GTGKTA F++ ILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 349 L---DTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
+ T++ + + LIL+PTRELA Q+ I A MN+ GG + +KL
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 123 QGADIIVATPGRL 135
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 94.3 bits (224), Expect = 2e-18
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F S L LL I GF P+ IQ+++I P+++G DV+A A++G+GKTA F I +L T
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 349 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L + + L+LSPTREL+ QI + AL F++++ A +GG ++ + L
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 523 HVVSGTPGRV 552
VV TPGR+
Sbjct: 144 DVVVATPGRL 153
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F++ GL +ELLR +Y+ GF PS IQ +S ++ RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 346 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L +++ +L+LSPTRELATQIQ L G + C GG G +++++
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 514 YGQHVVSGTPGRV 552
G +V TPGR+
Sbjct: 282 RGVDIVVATPGRL 294
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF + + +LR I G+E P+AIQ +I ++ G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQ 522
+D T + Q L+L PTRELA Q+ + G +++ + GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 523 HVVSGTPGRV 552
VV GTPGR+
Sbjct: 134 QVVVGTPGRM 143
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 93.9 bits (223), Expect = 2e-18
Identities = 46/133 (34%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 346 TLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 514 YGQHVVSGTPGRV 552
+G V+ TPGR+
Sbjct: 122 HGVDVLVATPGRL 134
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 93.5 bits (222), Expect = 3e-18
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +1
Query: 112 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 291
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 292 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 462
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 463 HACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+GG + E + ++ TPGR+
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 93.5 bits (222), Expect = 3e-18
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+SMGL EL R I + GF P+ IQ+++I I+ GRD++A +++G+GKTA F I ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 349 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L +T+ + LIL PTRELA QI V+ AL F ++Q +GG L
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNP 131
Query: 523 HVVSGTPGRV 552
++ TPGRV
Sbjct: 132 DILICTPGRV 141
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 93.5 bits (222), Expect = 3e-18
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 267
SE S+VE DT E V F SMGL + +GI G++ P+ IQ+++I I
Sbjct: 71 SECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 268 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 441
+ G+DV+A A++G+GKTA F + + + L T +T + LILSPTRELA Q K LG
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELG 190
Query: 442 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
F ++ +GG + + L ++ TPGR+
Sbjct: 191 KFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRL 227
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 93.1 bits (221), Expect = 4e-18
Identities = 43/128 (33%), Positives = 73/128 (57%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD M L + + + G+ P+ +Q R+ P ++G+D+I ++++GTGKTA F + +L+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ R + LIL PTRELA Q+ + L ++ A GG ++ + L+ G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 529 VSGTPGRV 552
+ GTPGRV
Sbjct: 151 IVGTPGRV 158
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 93.1 bits (221), Expect = 4e-18
Identities = 46/133 (34%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 346 TLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 514 YGQHVVSGTPGRV 552
+G V+ TPGR+
Sbjct: 122 HGVDVLVATPGRL 134
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 93.1 bits (221), Expect = 4e-18
Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F+ +GL +L+ I G+ +PSAIQ ++I I++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 346 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L + + + L+L+PTRELA Q+ + + G ++++ GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 126 RGADILIATPGRM 138
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 93.1 bits (221), Expect = 4e-18
Identities = 46/128 (35%), Positives = 75/128 (58%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +G+ +E+ + +P+ +Q ++I P++ RDV+AQAQ+GTGKT F + IL+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
++ Q LI++PTRELA QI L + + A GG ++ + +RKL H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 529 VSGTPGRV 552
+ GTPGR+
Sbjct: 125 IIGTPGRL 132
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 92.7 bits (220), Expect = 5e-18
Identities = 49/133 (36%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F+++GLRDEL+ I T G+ + IQ+ +I ++ D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 346 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L T ++ + LI++PTRELA Q+ + +N++ A GG + I +L
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 514 YGQHVVSGTPGRV 552
G V+ TPGR+
Sbjct: 122 EGVDVLIATPGRL 134
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 92.7 bits (220), Expect = 5e-18
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+S L + + + GF +P+ IQ +SI PI+ G DV+A AQ+GTGKTA F I +L T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 349 LDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L + + L+++PTRELA QI +V +G + ++ GG I DY
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 517 GQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 123 GIDILVATPGRM 134
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 92.3 bits (219), Expect = 7e-18
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Frame = +1
Query: 154 EVIP----TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 321
EVIP TFD +G++ LL + +G KP+ IQQ I P++ +V+ A++G+GKTA
Sbjct: 23 EVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTA 82
Query: 322 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 501
F++ I+ L T L+L+PTRELA+QI A G +N++ +GG ++ +
Sbjct: 83 AFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRIL 142
Query: 502 RKLDYGQHVVSGTPGRV 552
L HV+ TPG++
Sbjct: 143 HHLSGSPHVIIATPGKL 159
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 92.3 bits (219), Expect = 7e-18
Identities = 44/128 (34%), Positives = 82/128 (64%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
++S+GL LL+ I G++ PS +Q SI ++ G++++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
++++ Q +IL P RELA QI + + + + V +GGT++ +DI ++ G HV
Sbjct: 170 INSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHV 229
Query: 529 VSGTPGRV 552
+ GTPGR+
Sbjct: 230 MVGTPGRI 237
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 91.9 bits (218), Expect = 9e-18
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 339
TF+ +G+ E+ + I G+E P +Q+ ++P + G DV+A AQ+GTGKTA F + +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEE-VIPYLLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDY 516
LQ +D R Q LIL PTREL QI + +++ ++ GG+++ IR L
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 517 GQHVVSGTPGRV 552
G H++ TPGR+
Sbjct: 122 GVHIIVATPGRL 133
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 91.9 bits (218), Expect = 9e-18
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+S+GL L+ + G+E+P+ IQ+ ++ P+++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 346 TLDTTLR---ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
+ L+L PTRELA Q+ + I G + + GG + + +R L
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKR 156
Query: 517 GQHVVSGTPGR 549
G VV TPGR
Sbjct: 157 GVDVVVATPGR 167
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 91.9 bits (218), Expect = 9e-18
Identities = 46/129 (35%), Positives = 76/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+ +G+ +L+ I GF+ P+ +Q ++I I+ D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+ Q LIL+P RELA Q+ I + ++ + A G N+ + + L+ G
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 526 VVSGTPGRV 552
+V+GTPGRV
Sbjct: 124 IVTGTPGRV 132
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 91.9 bits (218), Expect = 9e-18
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 11/154 (7%)
Frame = +1
Query: 124 NVEFDTSED--VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 297
N++ + S D + I +F++ GLR+ +L I G++KP+ +Q+ ++ I+ GRD++A A
Sbjct: 181 NIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACA 240
Query: 298 QSGTGKTATFSISILQTL---------DTTLRETQVLILSPTRELATQIQKVILALGDFM 450
Q+G+GKTA F++ I+ TL +T E QV+I+SPTREL QI + I+
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
Query: 451 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ GGT++ KL G H++ TPGR+
Sbjct: 301 ILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRL 334
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 91.9 bits (218), Expect = 9e-18
Identities = 48/128 (37%), Positives = 75/128 (58%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ +G++ +L + GFEK IQ+ +I ++ GRDV+ QA +GTGKT +SIS+LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ Q LI++PTRELA QI + + + V+ A GG ++G + L G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 529 VSGTPGRV 552
+ TPGR+
Sbjct: 123 LVATPGRL 130
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 91.9 bits (218), Expect = 9e-18
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ L+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 364 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 537
+ VL++ TRELA QI K +M NV+ GG ++ +D L H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 538 TPGRV 552
TPGR+
Sbjct: 172 TPGRI 176
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 91.9 bits (218), Expect = 9e-18
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Frame = +1
Query: 145 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 324
E+ EV+ TF +G+R+EL++ G++ PS IQ ++ ++G+DVI AQ+G+GKT
Sbjct: 3 EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGA 62
Query: 325 FSISILQTLDTTLRETQ------------VLILSPTRELATQIQKVILALGDFMNVQCHA 468
F+I ILQ L + +++ +LSPTRELA QI + ALG ++++C
Sbjct: 63 FAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 469 CIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+GG + + L HV+ TPGR+
Sbjct: 123 LVGGIDRMQQTIALGKRPHVIVATPGRL 150
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 91.9 bits (218), Expect = 9e-18
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 306
D S + + TF+ + L++ELL+GIY GF +PS IQ+ + LP++ +++IAQ+QSG
Sbjct: 88 DPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSG 146
Query: 307 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGT 483
TGKTA F +++L ++ Q L L+PT ELA Q +V+ +G F ++VQ I G
Sbjct: 147 TGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGN 206
Query: 484 NLGEDIRKLDYGQHVVSGTPGRV 552
+ R D + ++ GTPG V
Sbjct: 207 RIP---RGTDITKQIIIGTPGTV 226
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 91.5 bits (217), Expect = 1e-17
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 3/134 (2%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+P+F + + + GFE+P+ +Q++ I I KG+ VI Q+Q+G+GKT TF + +
Sbjct: 1 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL 60
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLD 513
+ + T+ E Q++I +P+RELA QI + L F ++ +GGT+ + KL
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK 120
Query: 514 YGQ-HVVSGTPGRV 552
+ Q HVV GTPGR+
Sbjct: 121 HQQPHVVIGTPGRI 134
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 91.5 bits (217), Expect = 1e-17
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 339
F +GL +L+ + G+ P+ IQ+++I P+++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 340 LQTLDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L+ D + + ++L+L+PTREL +QI G ++ + +GGT++ +D KL
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 124 RGTDILIATPGRL 136
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 91.5 bits (217), Expect = 1e-17
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +1
Query: 37 FKNLEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYT 216
F E + I K+ +S++ + D + D + + TF + L++ LL+GI
Sbjct: 37 FTRAEISYINKLLNSKLFETHDL---DFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAA 93
Query: 217 YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILS 390
GF KPS IQ+R++ ++ +++IAQ+QSGTGKTATF +++L + T + Q L ++
Sbjct: 94 MGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMA 153
Query: 391 PTRELATQIQKVILALGDFM 450
PTRELA QI+ V + FM
Sbjct: 154 PTRELALQIESVGRQMAQFM 173
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 91.5 bits (217), Expect = 1e-17
Identities = 54/158 (34%), Positives = 80/158 (50%)
Frame = +1
Query: 79 SEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 258
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 259 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 438
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 439 GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
G + ++C +GG +L R+L HVV TPGR+
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRL 218
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 91.5 bits (217), Expect = 1e-17
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + + E+ + + GFE+ S IQ +I I+ +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
+D+ Q +IL PTRELA Q+ + + L ++ + GG + I+ L G
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 526 VVSGTPGRV 552
++ GTPGRV
Sbjct: 126 IIIGTPGRV 134
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 91.1 bits (216), Expect = 2e-17
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F ++ L ELL + GFE + IQQ SI ++ G+D+I QA++G+GKTA FS+ IL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
++ Q LIL PTRELA+Q+ I LG + ++ A GG + E L+ G
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 526 VVSGTPGRV 552
+V GTPGR+
Sbjct: 169 IVVGTPGRL 177
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 91.1 bits (216), Expect = 2e-17
Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S+ L E L + G+ + + +Q ++ ++ G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 522
+ + TQ L+L PTRELA Q+ K + L F N++ GG +G+ + L +
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 523 HVVSGTPGRV 552
H+V GTPGR+
Sbjct: 125 HIVVGTPGRI 134
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 91.1 bits (216), Expect = 2e-17
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F + L +L + G+++ +AIQQ+++ ++ +D+IA+A++G+GKTA F I +L
Sbjct: 37 SFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAEKDLIAKAKTGSGKTAAFGIGLLL 96
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 522
L TQ L+L PTRELAT + + L F N++ GG +G I L++G
Sbjct: 97 KLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPIGPQIGSLEHGA 156
Query: 523 HVVSGTPGRV 552
HVV TPGR+
Sbjct: 157 HVVVRTPGRI 166
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 91.1 bits (216), Expect = 2e-17
Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TFD GL + L R + P+ IQ+R+I + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 346 TLDT-----TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 510
L T T R T+ LILSPTRELA QI + I L + + GG ++ I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 511 DYGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 125 ARGVDILVATPGRL 138
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+SMGL +E+ RG+ G+ P+ IQ++++ I+ G D+ A A++G+GKTA F + ++Q
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 349 L--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L + LILSPTR+LATQ K LG F +++ +GG ++ +L
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP 170
Query: 523 HVVSGTPGRV 552
++ TPGR+
Sbjct: 171 DIIIATPGRL 180
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 90.6 bits (215), Expect = 2e-17
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Frame = +1
Query: 145 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 324
E ++ +F GL + + R + + P+ IQ ++I + GRDV+ AQ+GTGKTA+
Sbjct: 10 ERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTAS 69
Query: 325 FSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 489
F++ IL L + T+VL+LSPTREL+ QI A G + + IGG +
Sbjct: 70 FALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPM 129
Query: 490 GEDIRKLDYGQHVVSGTPGRV 552
G +R L G V+ TPGR+
Sbjct: 130 GRQVRSLMQGVEVLVATPGRL 150
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 342
TF +G+R + ++ I G KP+ IQ+++I ++K D I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN--VQCHACIGGTNLGEDIRKLDY 516
+D Q LILSPTREL QI+K + +++ + A GG + + L
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKR 122
Query: 517 GQHVVSGTPGRV 552
H+V TPGR+
Sbjct: 123 TTHIVIATPGRL 134
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 90.6 bits (215), Expect = 2e-17
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +G+ D ++ + + GF++P+ IQ+ SI ++G D++ QAQ+GTGKT F I +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ + Q LIL+PTRELA Q+ + + VQ GG + I+ L G +
Sbjct: 64 V-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 529 VSGTPGRV 552
V GTPGRV
Sbjct: 123 VVGTPGRV 130
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 90.6 bits (215), Expect = 2e-17
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 346 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L + T+VLIL PTRELA Q V + F ++ CIGG +L ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 517 GQHVVSGTPGR 549
+V TPGR
Sbjct: 380 RPDIVIATPGR 390
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 90.2 bits (214), Expect = 3e-17
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 9/154 (5%)
Frame = +1
Query: 118 LSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 276
LS+VE DT E V V F SMGL + +G+ G++ P+ IQ+++I I+ G
Sbjct: 128 LSDVEPDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDG 187
Query: 277 RDVIAQAQSGTGKTATFSISILQTLDTTLRE--TQVLILSPTRELATQIQKVILALGDFM 450
+DV+A A++G+GKTA F I + + L + + L+LSPTRELA Q K LG F
Sbjct: 188 KDVVAMARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFT 247
Query: 451 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ +GG + + L ++ TPGR+
Sbjct: 248 GLKMALILGGDRMEDQFAALHENPDIIIATPGRL 281
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 90.2 bits (214), Expect = 3e-17
Identities = 45/129 (34%), Positives = 72/129 (55%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F L+ +L+ + GF +P+ IQ+++I ++ G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+D + + Q L+L+PTRELA Q+ + GG++ + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 526 VVSGTPGRV 552
VV GTPGR+
Sbjct: 176 VVVGTPGRL 184
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 90.2 bits (214), Expect = 3e-17
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E +F ++GL L++ + G+ KP+ IQ ++I +++G+D+ AQ+GTGKTA F++
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 334 SILQTLDTT-----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGED 498
+ L T R ++LILSPTRELA+QI + + + +A GG +G
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 499 IRKLDYGQHVVSGTPGRV 552
+R LD G ++ TPGR+
Sbjct: 123 MRMLDRGTDILVATPGRL 140
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 90.2 bits (214), Expect = 3e-17
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+FDS ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 346 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L R + +I++PTRELA QIQ VI ALG + ++ GG I++L G
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 523 HVVSGTPGRV 552
+ PGR+
Sbjct: 122 EIAVVCPGRL 131
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 90.2 bits (214), Expect = 3e-17
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ T + + + + + + G + S IQ +S+ ++G+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 340 LQTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L+ ++ TQ ++L PTRELA Q+ Q+ A D N++ GG +G I+ L +
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 517 GQHVVSGTPGRV 552
H++ GTPGRV
Sbjct: 123 SPHIIVGTPGRV 134
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 90.2 bits (214), Expect = 3e-17
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
+ M L E+ + + +PS IQ I ++GRDV+ QA++GTGKTA F I I++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 349 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L+ R Q LIL+PTRELA Q++ I L + A GG L + KL
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 523 HVVSGTPGRV 552
H+V GTPGRV
Sbjct: 126 HIVVGTPGRV 135
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 90.2 bits (214), Expect = 3e-17
Identities = 46/129 (35%), Positives = 76/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S+ L ++R + G+E + IQ++SI +++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+ LI++PTRELA QI + +L M + IGGTN+ D++ L H
Sbjct: 116 HALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLH 175
Query: 526 VVSGTPGRV 552
V+ GTPGR+
Sbjct: 176 VIVGTPGRL 184
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 90.2 bits (214), Expect = 3e-17
Identities = 47/127 (37%), Positives = 75/127 (59%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ +GL LL+ + +++P IQ SI P+++G++V+ +Q+G+GKTA FS ILQT
Sbjct: 9 FEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPILQT 68
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
L +IL+ RELA QI + I G +N++ IGG + + ++ L H+
Sbjct: 69 LSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLGQIPHI 128
Query: 529 VSGTPGR 549
+ GTPGR
Sbjct: 129 IVGTPGR 135
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 90.2 bits (214), Expect = 3e-17
Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Frame = +1
Query: 61 IRKMTSSEVSSNRKILSE-DLSNVEFDTSEDVEVIPT--FDSMGLRDELLRGIYT-YGFE 228
+ ++ E IL E + SN++ TS D F+ + L EL++G+Y FE
Sbjct: 54 LNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFE 113
Query: 229 KPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRE 402
KPS IQ S+ I+ + +IAQA +G+GKT F + +L +D TLRE Q L + PTRE
Sbjct: 114 KPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRE 173
Query: 403 LATQIQKVILALGDFMNVQCHACIGGTNLGED--IRKLDYGQHVVSGTPG 546
LA Q +V+ +G F + + + G R HVV GTPG
Sbjct: 174 LANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPG 223
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 89.8 bits (213), Expect = 4e-17
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S G E+++ + G+EK + IQQ++I +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 346 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 510
L + + + LI +PTRELA QI I A + N+ A GG + R L
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERML 121
Query: 511 DYGQHVVSGTPGRV 552
+ G ++ TPGR+
Sbjct: 122 ENGVDILVATPGRL 135
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 89.8 bits (213), Expect = 4e-17
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 342
+F+ +GL ++ L + GF P+ IQ +I ++ G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
Q L + L+L PTRELA Q+ + +L + H GG ++ E +R L+ G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 523 HVVSGTPGRV 552
++ GT GRV
Sbjct: 167 EIIVGTTGRV 176
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 89.8 bits (213), Expect = 4e-17
Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+S GL E+LR + + GF P+ IQ ++ ++ RD++A A++G+GKT + I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 346 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L +++ VLIL+PTRELATQIQ L G + C GG G +++L+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 514 YGQHVVSGTPGRV 552
G +V TPGR+
Sbjct: 556 RGADIVVATPGRL 568
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 89.4 bits (212), Expect = 5e-17
Identities = 50/127 (39%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +1
Query: 178 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD 354
MG ++L G+ GF++PS IQ ++I P+ + G D+I +A+SGTGKT F I L+ +D
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAI-PLGRCGFDLIMRAKSGTGKTLVFCIISLEMID 59
Query: 355 TTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQHVV 531
+ QVLIL+PTRE+A QI +V ++G + +++ IGG + D +K++ Q +
Sbjct: 60 IDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNCQ-IA 118
Query: 532 SGTPGRV 552
G PGR+
Sbjct: 119 VGAPGRI 125
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 89.4 bits (212), Expect = 5e-17
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Frame = +1
Query: 277 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMN 453
+D+I QA+SGTGKT FS+ L+ +D T TQVLIL+PTRE+A QIQ I A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 454 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ H IGGT G D +KL H+ GTPGR+
Sbjct: 64 LRSHVFIGGTLFGPDRQKLK-KCHIAVGTPGRI 95
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 89.4 bits (212), Expect = 5e-17
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + L E+ I GFE+ S IQ +I I+KG+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 525
L+ + Q LIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 526 VVSGTPGRV 552
+V TPGR+
Sbjct: 131 IVIATPGRM 139
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 89.4 bits (212), Expect = 5e-17
Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F+ +G+ LL I G+EKP+ IQ R+I I+ DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 346 ----TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
T D R + L+++PTREL+ QI + + + M + +GG +L + L
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 514 YGQHVVSGTPGRV 552
G +V TPGRV
Sbjct: 122 EGVDIVIATPGRV 134
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 89.4 bits (212), Expect = 5e-17
Identities = 41/111 (36%), Positives = 71/111 (63%)
Frame = +1
Query: 220 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 399
GF+KP+ +Q+++ I+ G+DVIA++ +GTGKT +++ +L+ + + Q +IL+P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 400 ELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
EL QI +VI ++ + IGG N+ + + KL H++ GTPGRV
Sbjct: 83 ELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRV 133
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 89.4 bits (212), Expect = 5e-17
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Frame = +1
Query: 145 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 324
E+V+ P F +GL + + R I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+
Sbjct: 217 EEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTAS 276
Query: 325 FSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
F++ ++ L R + LIL PTRELA Q+ + + G ++ + IGG ++ +
Sbjct: 277 FTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMND 336
Query: 496 DIRKLDYGQHVVSGTPGRV 552
L G V+ TPGR+
Sbjct: 337 QRDVLSKGVDVLIATPGRL 355
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 89.4 bits (212), Expect = 5e-17
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + L +L + F +P+ IQ +I P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L T R+ + LIL+PTRELA QI + +L + ++ +GG N +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 523 HVVSGTPGRV 552
++V TPGR+
Sbjct: 124 NIVVATPGRL 133
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 89.4 bits (212), Expect = 5e-17
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ L L+ + FEKP+ IQ R I I+K ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 525
+D+ ++E Q ++++PTRELA Q+ L F V IGGT++ +D ++ +
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQ 125
Query: 526 VVSGTPGRV 552
++ GTP R+
Sbjct: 126 LIIGTPTRI 134
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 89.4 bits (212), Expect = 5e-17
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+++GL E+LR + G P+ IQ++SI ++ GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 346 TLDTTLR---ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
+ R + L+LSPTRELATQI + +++ +GG + R L
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKR 121
Query: 517 GQHVVSGTPGRV 552
+V TPGR+
Sbjct: 122 NWDIVVATPGRL 133
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 89.4 bits (212), Expect = 5e-17
Identities = 46/132 (34%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ TF+ + L LL G+ F P+ IQ +I + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDIRKLDY 516
+Q+ + + + +I+ PTRELA Q+Q L F + +C A IGGT++ +D ++++
Sbjct: 84 VQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNE 143
Query: 517 GQHVVSGTPGRV 552
+ V+ GTPGR+
Sbjct: 144 SR-VIIGTPGRL 154
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 89.4 bits (212), Expect = 5e-17
Identities = 52/152 (34%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Frame = +1
Query: 106 LSEDLSNVEFDTSEDVEV--IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 279
++ +L+N + TS DVE + F ++ LR +++RG+ F P+ IQ +I + G
Sbjct: 5 IAHNLANGQNRTS-DVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 280 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNV 456
D++ Q++SGTGKT + ++ LQ + + +VL++ PTRELA Q+ + LG+ +
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSF 123
Query: 457 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ + +GGT++ D KL HV GTPGR+
Sbjct: 124 KVSSFMGGTDVTRDREKL-RNCHVAIGTPGRL 154
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 89.4 bits (212), Expect = 5e-17
Identities = 47/128 (36%), Positives = 73/128 (57%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +G+ +++ GF+ P+ IQ ++I ++ RDVI AQ+G+GKTA F+I ILQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
L + +L+PTRELA QI + + ALG + V+ +GG ++ L HV
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHV 225
Query: 529 VSGTPGRV 552
+ TPGR+
Sbjct: 226 IVATPGRL 233
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 89.4 bits (212), Expect = 5e-17
Identities = 52/139 (37%), Positives = 76/139 (54%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 315
D + V TF +GL L+ + G P+A+Q+R I ++GRDV+ A++G+GK
Sbjct: 68 DDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 127
Query: 316 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
TA F++ IL L L L+PTRELA Q+ + ALG + ++C A IGG +
Sbjct: 128 TAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 187
Query: 496 DIRKLDYGQHVVSGTPGRV 552
+ L HVV TPGR+
Sbjct: 188 QAKGLARRPHVVVATPGRI 206
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 89.4 bits (212), Expect = 5e-17
Identities = 42/128 (32%), Positives = 77/128 (60%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ + Q LIL+PTRELA Q+++ I +G F ++ A G ++ + +L H+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 529 VSGTPGRV 552
V GTPGRV
Sbjct: 124 VVGTPGRV 131
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 89.0 bits (211), Expect = 6e-17
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F SM L +L+GI G++ P+ IQ+++I ++GRD++A A++G+GKTA F I + +
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L + + LILSPTRELA Q K I LG F ++ +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 523 HVVSGTPGR 549
++ TPGR
Sbjct: 158 DILIATPGR 166
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 89.0 bits (211), Expect = 6e-17
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TFD GL E+L+ I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 346 TL--------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 501
L + LIL+PTRELA Q+ + A ++ GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 502 RKLDYGQHVVSGTPGRV 552
+L G ++ TPGR+
Sbjct: 132 AELRRGVEILIATPGRL 148
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 89.0 bits (211), Expect = 6e-17
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL L+RG+ G+ P+ +Q R+I ++ GRD++A AQ+GTGKTA F++ +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 349 L-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L +VL+L PTREL Q++ G F +V+ GG G+ L G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTD 122
Query: 526 VVSGTPGRV 552
+V T GR+
Sbjct: 123 IVIATVGRL 131
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 89.0 bits (211), Expect = 6e-17
Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 4/163 (2%)
Frame = +1
Query: 73 TSSEVSSNRKILSEDLSNVEF--DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 246
TS++ + ++ +++S+ T + + + + L +LL+GI GF KPS IQ
Sbjct: 67 TSNDFMRPKHVMLDEISDALLVDGTQFNENINMQWSQLPLSPDLLKGIQNMGFAKPSKIQ 126
Query: 247 QRSILPIVKGR--DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 420
Q + LP++ G ++IAQA++G+GKTATF++++L ++ + Q L + PTRELATQ
Sbjct: 127 QCA-LPLILGSCTNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNV 185
Query: 421 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGR 549
+VI LG F ++C + ED + H+ GTPG+
Sbjct: 186 QVIQKLGQFTQIKCFLGVPQCPRYED----NDQYHLYVGTPGK 224
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 89.0 bits (211), Expect = 6e-17
Identities = 49/133 (36%), Positives = 72/133 (54%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 10 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 69
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
IL L T + L+L+PTRELA QI + ALG + VQ +GG + L
Sbjct: 70 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 129
Query: 514 YGQHVVSGTPGRV 552
H++ TPGR+
Sbjct: 130 KKPHIIIATPGRL 142
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 89.0 bits (211), Expect = 6e-17
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Frame = +1
Query: 178 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-- 351
+G+ E+++ + + G EK IQ+ + P ++GRD+I +A++GTGKT F I I+ +
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 352 ----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
R L+L+PTRELA Q++K ++ C GGT +G+ +R+LDYG
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYG 226
Query: 520 QHVVSGTPGRV 552
V GTPGRV
Sbjct: 227 VDVAVGTPGRV 237
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 89.0 bits (211), Expect = 6e-17
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF + L LLR T G++KP+ IQ I + GRD+ A A +G+GKTA F++ L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 346 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L + T+VLIL+PTRELA QI +I L F +++C +GG ++ E L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 517 GQHVVSGTPGRV 552
+V TPGR+
Sbjct: 288 MPDIVVATPGRM 299
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 89.0 bits (211), Expect = 6e-17
Identities = 49/133 (36%), Positives = 72/133 (54%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
IL L T + L+L+PTRELA QI + ALG + VQ +GG + L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140
Query: 514 YGQHVVSGTPGRV 552
H++ TPGR+
Sbjct: 141 KKPHIIIATPGRL 153
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 89.0 bits (211), Expect = 6e-17
Identities = 41/129 (31%), Positives = 76/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+S+GL L+ + + +KP+ IQ + PI+ GRD I A++G+GKT F++ I++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+ ++L+PTRELA Q+ + L +G + + +GG ++ + ++L+ H
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 526 VVSGTPGRV 552
++ TPGR+
Sbjct: 273 IIVATPGRL 281
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 88.6 bits (210), Expect = 8e-17
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ TF+ M L D L + + F P+ +Q+++I P + GRD++A AQ+GTGKT F I
Sbjct: 26 LTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPA 85
Query: 340 LQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L+ L DT QVLIL PTRELA Q+ V L +GGT+ I+ +
Sbjct: 86 LEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRS 145
Query: 517 GQHVVSGTPGRV 552
G VV TPGR+
Sbjct: 146 GARVVVATPGRL 157
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 88.6 bits (210), Expect = 8e-17
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +1
Query: 142 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 321
+ + + F +GL LL+ + G+ P+ IQ ++I ++ GRD++ AQ+GTGKTA
Sbjct: 58 ARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTA 117
Query: 322 TFSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 486
F++ IL L R + L+LSPTRELATQI + G M + GG
Sbjct: 118 AFALPILHRLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVK 177
Query: 487 LGEDIRKLDYGQHVVSGTPGRV 552
G ++ L G VV TPGR+
Sbjct: 178 YGPQMKALAAGVDVVVATPGRL 199
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 88.6 bits (210), Expect = 8e-17
Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 139 TSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 315
T++DV+ F S+GL+ ELL G+ GF++ + +Q+ +I I+ RDV+A+A++GTGK
Sbjct: 12 TTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGK 71
Query: 316 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM---NVQCHACIGGTN 486
T +F I ILQ ++ Q L+L TRELA Q KV L M + IGG +
Sbjct: 72 TGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGVS 131
Query: 487 LGEDIRKLDYGQHVVSGTPGRV 552
+ ED + VV TPGR+
Sbjct: 132 IAEDRERAREKPLVVLATPGRL 153
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 88.6 bits (210), Expect = 8e-17
Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 315
D E+V+V+ ++S GL +L GI G+++P+ IQ+ + +KG+D++A+A++G+GK
Sbjct: 3 DVEEEVKVVQ-WNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGK 61
Query: 316 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
T + I I+Q + + T+ LI+ PTREL +QI+ V+ L V+C + LG
Sbjct: 62 TGAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVVREL----CVKCLDVVSIYELGS 116
Query: 496 DIR-KLDYGQHVVSGTPGRV 552
++ + D +V GTPGR+
Sbjct: 117 EVETEADISASIVIGTPGRI 136
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 88.6 bits (210), Expect = 8e-17
Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 364 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 537
+ VL++ TRELA QI K +M +V+ GG ++ +D L HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 538 TPGRV 552
TPGR+
Sbjct: 171 TPGRI 175
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL E+L + G+ P+ IQ + I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 346 TL----DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 501
L +T++ + LI++PTRELA QI + + G ++ ++ GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 502 RKLDYGQHVVSGTPGRV 552
L G ++ TPGR+
Sbjct: 126 AALQAGVEILVATPGRL 142
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 88.2 bits (209), Expect = 1e-16
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Frame = +1
Query: 148 DVEVIPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 315
DVE++P F + L +L+ + F++PS IQ +I I K +D+IA +Q+G+GK
Sbjct: 6 DVELLPQEPNGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGK 65
Query: 316 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
TAT +I I ++T L + Q LI+ PTRELA Q +G + V+ A GG +
Sbjct: 66 TATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSAL 125
Query: 496 DIRKLDYGQHVVSGTPGRV 552
KL +G V+ TPGR+
Sbjct: 126 QQSKLKHGVQVLVATPGRL 144
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Frame = +1
Query: 103 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 282
+ ++D S + + D TF+ + L E +R I G+ P+ IQ +I +++G+D
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 283 VIAQAQSGTGKTATFSISILQTL---DTTLR-ETQVLILSPTRELATQIQKVILALGDFM 450
++A AQ+GTGKTA F + I++ L D R + L+L+PTRELA Q++ A ++
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 451 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ A GG ++ +++L G ++ TPGR+
Sbjct: 124 ALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRL 157
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 88.2 bits (209), Expect = 1e-16
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +1
Query: 190 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 369
+ LL + T GF + IQQ+SI PI+KG+D++AQ+++G+GKT F I + D +
Sbjct: 12 EALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNK 71
Query: 370 TQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 546
Q ++++PTRELA Q+ + + + N++ GG L L G H++ GTPG
Sbjct: 72 PQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPG 131
Query: 547 RV 552
R+
Sbjct: 132 RI 133
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = +1
Query: 178 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 351
MGL++ LLRGIY YG EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/128 (35%), Positives = 68/128 (53%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F S+G + + + G KP+A+QQ + I+ G + I +Q+GTGKTA F++ I+ T
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
L L++SPTRELA QI + G MN IGG + + L+ H+
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASALEKNPHI 124
Query: 529 VSGTPGRV 552
V TPGR+
Sbjct: 125 VVATPGRI 132
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 87.8 bits (208), Expect = 1e-16
Identities = 52/152 (34%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--- 279
S + ++ D S + + +F+ + L+ ELL+G+Y GF +PS IQ+ + LP++ +
Sbjct: 20 SNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQENA-LPLMMAQPAQ 78
Query: 280 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNV 456
++IAQ+QSGTGKTA F +++L ++ + Q L ++PT ELA QI +V+ +G F +V
Sbjct: 79 NLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADV 138
Query: 457 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ + G + +R + +V GTPG V
Sbjct: 139 RLVYAVRGNRI---VRGTKVQEQIVVGTPGTV 167
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 87.8 bits (208), Expect = 1e-16
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F G +L + G++ P+ IQ+ +I ++ GRD++ QAQ+GTGKTA F++ +++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 349 L-DTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L D +VL+++PTRELATQ+ + + + N + A GGT+ I L
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 523 HVVSGTPGRV 552
VV GTPGR+
Sbjct: 173 DVVVGTPGRI 182
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 87.8 bits (208), Expect = 1e-16
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Frame = +1
Query: 109 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 285
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 286 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNV 456
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 457 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ C GG +L L G VV TPGR+
Sbjct: 249 EVCLCAGGLDLKAQEAALRSGPDVVVATPGRL 280
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 87.8 bits (208), Expect = 1e-16
Identities = 48/129 (37%), Positives = 75/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF S+G+ L + + Y P+ IQQ+S+ ++GRD A++G+GKT F++ ILQ
Sbjct: 62 TFSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPILQ 121
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L L+L+PTRELA QI++ + A G+ + +Q + IGG + E LD H
Sbjct: 122 ELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGGKDSVEQSAILDSRPH 181
Query: 526 VVSGTPGRV 552
++ TPGR+
Sbjct: 182 ILIATPGRL 190
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 87.4 bits (207), Expect = 2e-16
Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 9/175 (5%)
Frame = +1
Query: 55 N*IRKMTSSEVSSNR-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEK 231
N I+ ++++ N +I+ E+L N+ + +E ++ + +D M + D+LL I +E
Sbjct: 141 NKIKTKPLNQMNENDWRIIRENL-NIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YEN 198
Query: 232 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--------TLDTTLRETQVLIL 387
P+ IQ SI +K RD+IA A++GTGKT + I ++Q T +T+ L+L
Sbjct: 199 PTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVL 258
Query: 388 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+PTRELA QIQK L L ++ CIGG + I +L G +V PGR+
Sbjct: 259 APTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRL 313
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/129 (32%), Positives = 75/129 (58%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F + L E+ R + G+E P+ +Q I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
++ + Q L+L+PTRELA Q+++ I +G F ++ A G + +L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 526 VVSGTPGRV 552
+V GTPGRV
Sbjct: 125 IVVGTPGRV 133
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 87.4 bits (207), Expect = 2e-16
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF+++ L + +L+ + G+ P+ IQ++SI +++G+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 346 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
L T + + L+L+PTRELA QI + A G + ++ GG L G
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 520 QHVVSGTPGRV 552
++ TPGR+
Sbjct: 122 IQILVATPGRL 132
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 87.4 bits (207), Expect = 2e-16
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-Q 345
F S+ L LL+ + GF +P+ IQ +I P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
+D T+ L+++PTRELA QI + + L + A GG ++ G
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 526 VVSGTPGRV 552
V+ GTPGR+
Sbjct: 123 VLIGTPGRL 131
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 87.4 bits (207), Expect = 2e-16
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
IP+F + L +++ I G+E+P+ IQQ I I+ G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 516
++ R Q ++L P+RELA Q+ + L + GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 517 GQHVVSGTPGRV 552
G ++ GTPGRV
Sbjct: 123 GVQIIIGTPGRV 134
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 87.4 bits (207), Expect = 2e-16
Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+S+ L + I G++ P+ IQ++++ I+ G DV+A A++G+GKTA F I +L+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L + + + LILSPTR+LA Q K LG F +++ +GG ++ + +L G
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 523 HVVSGTPGRV 552
V+ TPGR+
Sbjct: 150 DVIIATPGRL 159
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 87.0 bits (206), Expect = 3e-16
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Frame = +1
Query: 163 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 342
PTF +GL + ++R + G P IQ +I + G+D++ + ++G+GKT +F + L
Sbjct: 61 PTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTL 120
Query: 343 QTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
TL T + + +IL+PTRELA Q+ + GD + ++ GGT++G I L+
Sbjct: 121 ATLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALE 180
Query: 514 YGQHVVSGTPGRV 552
G V+ TPGR+
Sbjct: 181 RGVDVLVATPGRL 193
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 87.0 bits (206), Expect = 3e-16
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ F +G+ + + G + + IQ+++I I+ G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQ---KVILALGDFMNVQCHACIGGTNLGEDIRKL 510
L+ +D + Q LI++PTRELA QI K +L + +NV A GG ++ + +RKL
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKL 121
Query: 511 DYGQHVVSGTPGRV 552
H+V TPGR+
Sbjct: 122 KGNTHIVVATPGRL 135
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 87.0 bits (206), Expect = 3e-16
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD + L DE+L G+ F + + +Q +I PI++GRDVIA AQ+GTGKTA + + IL
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 349 LDTTLRETQV---LILSPTRELATQIQKVILALGDFMNVQCHACIGGTN---LGEDIRKL 510
L + V +I++PTRELA QI + + FM V A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 511 DYGQHVVSGTPGRV 552
G +V TPGR+
Sbjct: 123 AMGADIVIATPGRL 136
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 87.0 bits (206), Expect = 3e-16
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF + L D++L + F + + IQ R+I ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 522
++ R Q +I++PTRELA QI I G N+ IGG ++ + I++L Q
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQ 121
Query: 523 HVVSGTPGRV 552
+V GTPGRV
Sbjct: 122 -IVVGTPGRV 130
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 87.0 bits (206), Expect = 3e-16
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 339
TF + ++++G+ GF + +Q++ I+PIV R D++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 340 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 516
+Q DT L+ TQ L+L PTREL Q+ + +G ++ ++ GG ++ +L
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEELRK 121
Query: 517 GQHVVSGTPGRV 552
G VV TPGR+
Sbjct: 122 GAQVVVATPGRL 133
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 87.0 bits (206), Expect = 3e-16
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 345
F ++GL + + + GF++PS IQ+++I ++ + D+I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
++ L++ Q LIL PTRELA Q+ + I + + GG + + R L G
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 526 VVSGTPGR 549
+V TPGR
Sbjct: 124 LVVATPGR 131
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 87.0 bits (206), Expect = 3e-16
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +1
Query: 193 ELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET 372
+L++ IY YGFE PS +QQ SI +++G+ + AQ+G+GKTA F IS+L ++
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSIC 72
Query: 373 QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HVVSGTPGR 549
Q +I+SPT+EL+ Q +VI LG ++ G E K+ G H V TP R
Sbjct: 73 QAVIISPTKELSNQTLEVINTLGTRSGIRGVCLTSGVMAKEQFEKITKGSAHFVCVTPKR 132
Query: 550 V 552
+
Sbjct: 133 L 133
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 87.0 bits (206), Expect = 3e-16
Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ E+LR I GFE PS +Q I V G D++ QA+SG GKTA F ++ LQ L+ +
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 364 RET-QVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVS 534
T VL++ TRELA QI K +M V+ GG + +D L G H+V
Sbjct: 108 NNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
Query: 535 GTPGRV 552
GTPGR+
Sbjct: 168 GTPGRI 173
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 87.0 bits (206), Expect = 3e-16
Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 306
DT + I +F +GL ++ G+ F+KPS IQ R+ LP++ R++IAQ+QSG
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARA-LPLMLSNPPRNMIAQSQSG 145
Query: 307 TGKTATFSISILQTLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 483
TGKT F ++IL +D + Q L L+P+RELA QIQ VI ++G F C +
Sbjct: 146 TGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF----CTGLVVDA 201
Query: 484 NL-GEDIRKLDYGQHVVSGTPGRV 552
+ G R+ +VV GTPG V
Sbjct: 202 AIPGAISRETGVKANVVVGTPGTV 225
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 86.6 bits (205), Expect = 3e-16
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Frame = +1
Query: 61 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDV-EVIPTFDSMGLRDELLRGIYTYGFEKPS 237
++K + EV N + + S+ + + E+ E I F + G+R + + ++ G +
Sbjct: 67 VKKEKNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLF 126
Query: 238 AIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTREL 405
IQ ++ PI G DVIAQA++GTGKT +F + ++ Q + R+ +L L+PTREL
Sbjct: 127 PIQAQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTREL 186
Query: 406 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
A QI + A+G ++ C GGT+ + G VV GTPGR+
Sbjct: 187 AKQISEYFEAIGPHLSTTC--IYGGTSYWPQESAIRRGLDVVVGTPGRI 233
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 86.6 bits (205), Expect = 3e-16
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +G+ +L+ + P+ +Q++SI +++G+D++A AQ+GTGKTA F + I+Q
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
+ R LIL PTRELA Q+ + + +++ GGT++G KL+ G
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 523 HVVSGTPGRV 552
++ TPGR+
Sbjct: 129 DILIATPGRL 138
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 86.6 bits (205), Expect = 3e-16
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Frame = +1
Query: 142 SEDVEVIP-TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKT 318
+E +EV TF +GL +EL+ + G P AIQ R++ + GRD++ +A++G+GKT
Sbjct: 138 AEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGSGKT 197
Query: 319 ATFSISILQTLDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 483
F + +L L R + L+L PTRELA Q+ + LGD ++++ +GG
Sbjct: 198 LGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGV 257
Query: 484 NLGEDIRKLDYGQHVVSGTPGRV 552
G I L G V+ TPGR+
Sbjct: 258 PYGRQIAALQRGIDVLIATPGRL 280
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 86.6 bits (205), Expect = 3e-16
Identities = 43/127 (33%), Positives = 73/127 (57%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL + + G++ P+ IQ+ +I P+++ + VIA A++G+GKTATF+ ILQ
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
L ++L+ RELA QI + G +N++ +GG + + + +L+ H+
Sbjct: 64 LAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSELERIPHI 123
Query: 529 VSGTPGR 549
V GTPGR
Sbjct: 124 VVGTPGR 130
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 86.6 bits (205), Expect = 3e-16
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Frame = +1
Query: 49 EAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFE 228
EA I +MT SEVSS RK + I F+ G E++ + GF
Sbjct: 54 EAESISRMTPSEVSSFRKTNEMIVKGTNVP-----HPIQKFEEAGFSSEVVSSLVEKGFS 108
Query: 229 KPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI-SILQTLDTT-LRETQ---VLILSP 393
+P+AIQ + + GRD++ AQ+G+GKT +F + +++ D LR VL+L+P
Sbjct: 109 EPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAP 168
Query: 394 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
TREL QI+KV+ N++ A GG + IR L G VV TPGR+
Sbjct: 169 TRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRL 221
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 86.2 bits (204), Expect = 5e-16
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F +GL ELL+ + G+E+P+ +Q +I ++ RD+IA AQ+GTGKTA+F + ++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 346 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L R + LIL PTRELA Q+ + G + + IGG + E L+
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 517 GQHVVSGTPGRV 552
G V+ TPGR+
Sbjct: 122 GVDVLIATPGRL 133
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 86.2 bits (204), Expect = 5e-16
Identities = 45/133 (33%), Positives = 79/133 (59%), Gaps = 4/133 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F + L EL + G+E+P+ IQ ++I +++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 346 TLDTT----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L R + L+L+PTRELA Q+ L G + ++ + GG + I++L
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 125 RGTDILVATPGRL 137
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 86.2 bits (204), Expect = 5e-16
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Frame = +1
Query: 82 EVSSNRKI----LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 249
E+ S+ K + E+ E TS+ + F SM L LL+ I GF P+ IQ+
Sbjct: 199 EIESSEKFESFPMDENNEQEEETTSKKKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQR 258
Query: 250 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQVLILSPTRELATQIQK 423
+SI I+ G D++ A++G+GKT F I ++Q L +T + +ILSPTRELA Q K
Sbjct: 259 KSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFK 318
Query: 424 VILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
V+ ++ +GG ++ + L ++ TPGR+
Sbjct: 319 VVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRL 361
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 86.2 bits (204), Expect = 5e-16
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ L+ ++ ++ GF +P+ IQ+R I ++K VI Q+Q+GTGKT + + +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILAL---GDFMNVQCHACIGGTNLGEDIRKLDYG 519
+D QV+I +PTRELA QI + L + + ++ IGGT+ + I KL
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 520 QHVVSGTPGRV 552
H+V GTPGR+
Sbjct: 126 PHLVVGTPGRI 136
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 86.2 bits (204), Expect = 5e-16
Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +MGL LL+ I GF P+ IQ+++I I++ +DV+ A++G+GKTA F I +++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 349 L--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L +T + LILSP+RELA Q KV+ LG +++ +GG +L E +
Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNP 212
Query: 523 HVVSGTPGR 549
+V TPGR
Sbjct: 213 DIVIATPGR 221
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 86.2 bits (204), Expect = 5e-16
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +MGL LLR I GF P+ IQ+++I +++ RDV+ A++G+GKTA F I +++
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L + +I+SP+RELA Q KV+ LG +++ +GG +L E +
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANP 207
Query: 523 HVVSGTPGR 549
++ TPGR
Sbjct: 208 DIIIATPGR 216
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 85.8 bits (203), Expect = 6e-16
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Frame = +1
Query: 175 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 354
S L LR I G+ P+AIQ ++I I+ GRDV+ AQ+G+GKTA F++ +LQ L
Sbjct: 9 SPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLA 68
Query: 355 T----TLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLDY 516
T R T+ LIL PTRELA Q+ + I ++ V+ GG ++ + L
Sbjct: 69 NAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRG 128
Query: 517 GQHVVSGTPGRV 552
G +V TPGR+
Sbjct: 129 GADIVVATPGRL 140
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 85.8 bits (203), Expect = 6e-16
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F + + E+ +GI GF + + IQ++++ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 349 LDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L + + + LIL+PTREL QI+K ALG + A GG + + L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 514 YGQHVVSGTPGRV 552
G +V GTPGR+
Sbjct: 123 AGADIVIGTPGRL 135
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 85.8 bits (203), Expect = 6e-16
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD +GL L+ G+ P+ IQ R+I + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 349 L-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L R + LIL+PTREL +QI + + A + +++ +GG +G I++ +
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 193 RGADLIVATPGRL 205
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 85.8 bits (203), Expect = 6e-16
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF +GL EL G++ P+ IQ +I +GRD+I AQ+G+GKT +++ ++
Sbjct: 54 TFQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVN 113
Query: 346 TLDTTLRET---QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L R+T VL++ PTRELA Q+ + LG + ++ +GG ++ E +L
Sbjct: 114 WL-LAQRKTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELSK 172
Query: 517 GQHVVSGTPGRV 552
HVV GTPGRV
Sbjct: 173 RPHVVVGTPGRV 184
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 85.8 bits (203), Expect = 6e-16
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +1
Query: 121 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQA 297
++VEFD S F M L + +LRG+ F PS IQ R+I P+ K G D++ QA
Sbjct: 14 ADVEFDLSLQ------FSKMFLSEPVLRGLTRNNFTHPSPIQARAI-PLAKLGLDLLVQA 66
Query: 298 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 474
+SGTGKT F++ I + + + Q L + PTRE+A QI+ V+ +G N + + I
Sbjct: 67 KSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFI 126
Query: 475 GGTNLGEDIRKLDYGQHVVSGTPGRV 552
GG ++ +D + L VV GTPGR+
Sbjct: 127 GGLDISQDRKNLQSCSAVV-GTPGRI 151
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 85.8 bits (203), Expect = 6e-16
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S LQ ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 364 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN--LGEDIRKLDYGQHVVS 534
+ L+L TRELA QI + ++ + + GG N + +D+ K + H+V
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC-PHIVV 171
Query: 535 GTPGRV 552
GTPGRV
Sbjct: 172 GTPGRV 177
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 85.4 bits (202), Expect = 8e-16
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Frame = +1
Query: 148 DVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF 327
DV I +FD + L + L+G+ G+ KP+ IQ+ +I + G+D++ AQ+G+GKT F
Sbjct: 46 DVSTINSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAF 105
Query: 328 SISILQTLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
I IL+ L T L L+++PTRELA QI + + +G+ IGG +L
Sbjct: 106 LIPILERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKF 165
Query: 496 DIRKLDYGQHVVSGTPGRV 552
+ ++D ++V GTPGR+
Sbjct: 166 ERNRMDQ-CNIVIGTPGRI 183
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 85.4 bits (202), Expect = 8e-16
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Frame = +1
Query: 163 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 342
P F+ +GL LL + G ++PS IQ ++I P+++G+DV+ +Q+G+GKTA F + +L
Sbjct: 20 PGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPML 79
Query: 343 QTLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
Q L + LIL PTRELA Q V LG ++++ GGT+ + ++ +
Sbjct: 80 QKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSD 139
Query: 517 GQHVVSGTPGRV 552
G ++ T GR+
Sbjct: 140 GVDIIVATHGRL 151
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 85.4 bits (202), Expect = 8e-16
Identities = 44/128 (34%), Positives = 72/128 (56%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F L+D + + GF++PS +Q+ +I +++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ + L++ PTRELA Q+ + G ++ GGT G+ I ++ V
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQASIV 121
Query: 529 VSGTPGRV 552
V+ TPGR+
Sbjct: 122 VA-TPGRL 128
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F ++GL +++L + G+ P+ IQ+++I ++ +DV+ AQ+GTGKTA F + +L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 346 TLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L+ R + LIL PTRELA Q+++ G + IGG + G+ KL
Sbjct: 62 ILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLTR 121
Query: 517 GQHVVSGTPGRV 552
G V+ TPGR+
Sbjct: 122 GVDVLIATPGRL 133
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F ++G+ DE++ + G P IQ +I + GRDV+ +A +G+GKT F + +L
Sbjct: 231 FSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSR 290
Query: 349 LDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
L T RE + LILSPTRELA QI + +L M + GG + G + G
Sbjct: 291 LSATPREDNRPRALILSPTRELAMQIADALSSLASSMGLSTILIAGGMSYGPQTKAFKRG 350
Query: 520 QHVVSGTPGRV 552
+V TPGR+
Sbjct: 351 VDLVVATPGRL 361
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 85.0 bits (201), Expect = 1e-15
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +GL E+++ + G+ P+ IQ ++I ++ +D++ AQ+GTGKTA F++ ++Q
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 349 L-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
L R + +ILSPTRELA QI + ++ G + + IGG + + +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 514 YGQHVVSGTPGRV 552
G ++ TPGR+
Sbjct: 225 KGVDILVATPGRL 237
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD++GL ++++ + G+ P+ IQ +I +++ +DV+ AQ+GTGKTA+F + +L
Sbjct: 8 FDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLTL 67
Query: 349 LD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
L+ R + LIL PTRELA Q+++ G + IGG + RKL+ G
Sbjct: 68 LEKGRAKARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERG 127
Query: 520 QHVVSGTPGRV 552
V+ TPGR+
Sbjct: 128 ADVLIATPGRL 138
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 85.0 bits (201), Expect = 1e-15
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
I F GL D +L + +EKP IQ + I ++ GRDV+A A++G+GKT + +
Sbjct: 387 IYNFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPA 446
Query: 340 LQTL--DTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIR 504
++ + LRE + VLI++PTRELA+QI L + ++ A GG+ +GE +
Sbjct: 447 IRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLN 506
Query: 505 KLDYGQHVVSGTPGRV 552
L G +V GTPGR+
Sbjct: 507 ALKRGVEIVCGTPGRL 522
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 85.0 bits (201), Expect = 1e-15
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + IL+
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 346 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L + T+V+IL+PTRELA Q V + L +++ +GG +L +L
Sbjct: 354 RLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRL 413
Query: 517 GQHVVSGTPGR 549
VV TPGR
Sbjct: 414 RPDVVIATPGR 424
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 84.6 bits (200), Expect = 1e-15
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = +1
Query: 73 TSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 252
T + K +ED ++F+ + + + TF +M L LL+ + + F P+ IQ
Sbjct: 124 TKEKKVKKEKAKAEDQDLIDFEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAA 183
Query: 253 SILPIVKGRDVIAQAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQK 423
+I + GRD+ A +GTGKTA + + L+ L T+VL+L PTREL Q+ +
Sbjct: 184 TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQ 243
Query: 424 VILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
V L F +V+ +GG ++ L +V TPGR+
Sbjct: 244 VTKQLSQFTSVEVGLSVGGLDVKVQESVLRKNPDIVIATPGRL 286
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 84.6 bits (200), Expect = 1e-15
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Frame = +1
Query: 79 SEVSSNRKILSEDLSN-VEFDTSEDVEVIP-----TFDSMGLRDELLRGIYTYGFEKPSA 240
SEVS + ++ SE +S V ED E P T+D M L + + + G+ P+
Sbjct: 122 SEVSGHTEVDSELVSEAVAAPEGEDAEEEPDPAPETWDEMALPEHVRNAVDAAGWTAPTK 181
Query: 241 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTRELA 408
+Q R+ +++G DV+ Q+Q+G+GKT F + L Q D Q+++L PTRELA
Sbjct: 182 VQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLANRFQPGDAAETGVQLIVLLPTRELA 241
Query: 409 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
Q+ ++ L V GGT + + L G H V GTPGRV
Sbjct: 242 KQVCNELVRLAIETPVDVLPVYGGTAMNPQLDALARGVHAVVGTPGRV 289
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 84.6 bits (200), Expect = 1e-15
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 309
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 609 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 668
Query: 310 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 486
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 669 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 728
Query: 487 LGEDIRKLDYGQHVVSGTPG 546
+ +R + +V GTPG
Sbjct: 729 MAA-MRGRKLTEQIVIGTPG 747
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +MGL +L+ I G++ P+ IQ+++I I++GRDV+A A++G+GKT F I + +
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 349 L-DTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L ++ + L+L+PTRELA Q K I LG F +++ +GG ++ +
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAIHTLP 159
Query: 523 HVVSGTPGR 549
++ TPGR
Sbjct: 160 DIIVATPGR 168
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 84.6 bits (200), Expect = 1e-15
Identities = 52/162 (32%), Positives = 86/162 (53%)
Frame = +1
Query: 67 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 246
K E ++ +E+ N D S ++ TF+ +G+ D L++ + P+ IQ
Sbjct: 42 KYKERENVDGTRLYNEEQINSYSDQSNNI----TFEELGVEDWLIKISKSVHILYPTKIQ 97
Query: 247 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKV 426
Q + I++G++VI +++G+GKT + SILQ L+ + LIL PTREL QI +
Sbjct: 98 QLCLPLIIQGKNVIGSSETGSGKTICYCWSILQELNKNVYGIFSLILLPTRELVFQIIEQ 157
Query: 427 ILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
G + V +CIGG +L E + + H++ GTPGR+
Sbjct: 158 FHLYGSKIGVMILSCIGGFSLIEQRKSVMTKPHIIVGTPGRI 199
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 84.6 bits (200), Expect = 1e-15
Identities = 43/127 (33%), Positives = 73/127 (57%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ LR+EL+ I G+ +P+ +Q +I + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ + LIL PTRELA Q+ KV ALG ++ GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 529 VSGTPGR 549
+ GTPGR
Sbjct: 123 IVGTPGR 129
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 84.6 bits (200), Expect = 1e-15
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = +1
Query: 220 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL----RETQV-LI 384
GF KPS IQ ++I ++ GRD+I A++G+GKT ++ + +++ + L E + L+
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLV 466
Query: 385 LSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
LSPTRELA QI+K IL M+++ C GG+N+ I +L G +V+ TPGR+
Sbjct: 467 LSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRL 522
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 84.6 bits (200), Expect = 1e-15
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Frame = +1
Query: 160 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 339
+ +F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 340 LQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 510
L+ L + T+V++L+PTRELA Q V L +++ +GG +L +L
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 511 DYGQHVVSGTPGR 549
VV TPGR
Sbjct: 395 RLRPDVVIATPGR 407
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F +MGL LL+ I GF+ P+ IQ++++ I++G DV+ A++G+GKTA F I +++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 349 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 522
L T + + +I+SP+RELA Q KV+ G +++ +GG +L E +
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNP 199
Query: 523 HVVSGTPGR 549
++ TPGR
Sbjct: 200 DIIIATPGR 208
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 84.2 bits (199), Expect = 2e-15
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 342
TF + L+ + F +P+ IQQ+ I P+VK G VI Q+Q+G+GKT + + L
Sbjct: 5 TFTQYDFKPFLIDAVRELRFTEPTGIQQK-IFPVVKKGVSVIGQSQTGSGKTHAYLLPTL 63
Query: 343 QTLDTTLRETQVLILSPTRELATQIQKVILALGDF----MNVQCHACIGGTNLGEDIRKL 510
++ E Q++I +PTRELA QI + I+ L F + IGGT+ I KL
Sbjct: 64 NRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSIEKL 123
Query: 511 DYGQHVVSGTPGRV 552
H+V GTPGR+
Sbjct: 124 KKQPHIVVGTPGRI 137
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 84.2 bits (199), Expect = 2e-15
Identities = 50/129 (38%), Positives = 70/129 (54%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF M L LL + KP+ +Q ++I + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
TL E + LIL P+RE+A QI KV L L M V IGGT + +L
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 526 VVSGTPGRV 552
++ TPGR+
Sbjct: 153 LIIATPGRM 161
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Frame = +1
Query: 124 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 303
N+ +TSE + F+ + L LL + G+++ + +Q S+ I+ D + +A +
Sbjct: 8 NISDNTSETSPELLHFNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADT 67
Query: 304 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGG 480
G+GKT F++++L L+ Q L+L PTRELA Q+ + L +N++ GG
Sbjct: 68 GSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGG 127
Query: 481 TNLGEDIRKLDYGQHVVSGTPGRV 552
L++G HV+ GTPGRV
Sbjct: 128 EPSRIQTNSLEHGAHVLVGTPGRV 151
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F S+GL + L+R I G+ +P+ +QQR+I +++GRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 346 TL------DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 495
L D + R+ +VL+L+PTRELA Q+ +N GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 496 DIRKLDYGQHVVSGTPGRV 552
++ + G V+ PGR+
Sbjct: 122 QVQAMAKGVDVLVACPGRL 140
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/129 (36%), Positives = 70/129 (54%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+F + L E L + GFE P+ IQ ++I P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 346 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 525
L T+ L+L+PTRELA QI + + G V+ IGG + + L +
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 526 VVSGTPGRV 552
+V TPGR+
Sbjct: 124 IVIATPGRL 132
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+SM L L+ + P+ IQQ++I +K RDVI + +GTGKT + + +
Sbjct: 5 FESMELEKSLVEALKKESITVPTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLFMK 64
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA--CIGGTNLGEDIRKLDYGQ 522
L +E Q LIL PT ELA Q+ + I L ++ + IG N+ I KL
Sbjct: 65 LSAEKKEMQALILVPTHELAIQVVRQIELLSQNSEIKATSTPIIGDVNIMRQIDKLKLKP 124
Query: 523 HVVSGTPGRV 552
H++ GTPGR+
Sbjct: 125 HIIVGTPGRI 134
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/131 (32%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
FD++GL +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 349 LDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 519
L + + L+++PTRELA Q+ I F+ ++ A GG N+ + ++ G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 520 QHVVSGTPGRV 552
++ TPGR+
Sbjct: 144 VDILVATPGRL 154
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
TF S G +LL I G+ P+ IQ++ I+ GRDV+A A++G+GKTA F + +++
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIE 64
Query: 346 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L + + + ++LSPTRELA Q +V+ L N+ A GG++L L
Sbjct: 65 RLGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSG 124
Query: 517 GQHVVSGTPGRV 552
+V TPGR+
Sbjct: 125 NPDIVVATPGRL 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,095,061
Number of Sequences: 1657284
Number of extensions: 9778612
Number of successful extensions: 33729
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 31598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32820
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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