Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_G12
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 262 1e-70
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 262 2e-70
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 177 6e-45
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 177 6e-45
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 103 7e-23
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 97 7e-21
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 93 9e-20
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 93 9e-20
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 91 4e-19
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 91 4e-19
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 91 5e-19
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 88 5e-18
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 84 7e-17
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 84 7e-17
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 84 7e-17
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 83 2e-16
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 83 2e-16
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 80 9e-16
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 76 2e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 74 8e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 74 8e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 74 8e-14
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 68 4e-12
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 68 5e-12
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 63 1e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 62 3e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 62 3e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 62 3e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 61 6e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 61 6e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 61 6e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 60 1e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 60 1e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 52 4e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 52 4e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 44 7e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 35 0.034
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.10
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.14
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.18
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 32 0.32
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.56
AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical ... 31 0.74
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 262 bits (642), Expect = 1e-70
Identities = 122/154 (79%), Positives = 140/154 (90%)
Frame = +1
Query: 91 SNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 270
+ +K +D++ VEF++SE+V VIPTFD MGLR++LLRGIY YGFEKPSAIQQR++ I+
Sbjct: 2 AGKKAEKDDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAIL 61
Query: 271 KGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM 450
K RDVIAQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QIQKV+LALGD+M
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 451 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 155
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 262 bits (641), Expect = 2e-70
Identities = 123/156 (78%), Positives = 143/156 (91%)
Frame = +1
Query: 85 VSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILP 264
++ N+K ++D++ VEF++SE+V +IPTFD MGLR++LLRGIY YGFEKPSAIQQR+I
Sbjct: 1 MAENKK-KNDDMATVEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPA 59
Query: 265 IVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGD 444
I+K RDVIAQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QIQKV+LALGD
Sbjct: 60 ILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGD 119
Query: 445 FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV
Sbjct: 120 YMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 155
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 177 bits (430), Expect = 6e-45
Identities = 84/133 (63%), Positives = 107/133 (80%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
SILQ +D Q L+++PTRELA QIQKV+ ALG+++NV CIGGT++ +D RKL+
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 514 YGQHVVSGTPGRV 552
G HVV GTPGRV
Sbjct: 146 AGIHVVVGTPGRV 158
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 177 bits (430), Expect = 6e-45
Identities = 84/133 (63%), Positives = 107/133 (80%)
Frame = +1
Query: 154 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 333
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 334 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 513
SILQ +D Q L+++PTRELA QIQKV+ ALG+++NV CIGGT++ +D RKL+
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 514 YGQHVVSGTPGRV 552
G HVV GTPGRV
Sbjct: 146 AGIHVVVGTPGRV 158
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 103 bits (248), Expect = 7e-23
Identities = 48/128 (37%), Positives = 81/128 (63%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ L +LL GI+ G+EKPS IQ+ SI + G+D++A+A++GTGKT + I +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 349 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 528
+ L+ Q +++ PTRELA Q ++ + L + ++ GGT+L +DI +L+ H+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 529 VSGTPGRV 552
V TPGR+
Sbjct: 165 VIATPGRI 172
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 97.1 bits (231), Expect = 7e-21
Identities = 52/122 (42%), Positives = 75/122 (61%)
Frame = +1
Query: 178 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 357
M L++ELLRGIY +GFEKPSAIQ+ ++ P G+DV Q+Q+G+GKT I ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 358 TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSG 537
QV++L+P R +A + + + +LG +NV C+G E+ D HV+ G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMG 115
Query: 538 TP 543
TP
Sbjct: 116 TP 117
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 93.5 bits (222), Expect = 9e-20
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +1
Query: 112 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 291
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 292 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 462
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 463 HACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+GG + E + ++ TPGR+
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 93.5 bits (222), Expect = 9e-20
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +1
Query: 112 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 291
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 292 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 462
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 463 HACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+GG + E + ++ TPGR+
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 91.5 bits (217), Expect = 4e-19
Identities = 54/158 (34%), Positives = 80/158 (50%)
Frame = +1
Query: 79 SEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 258
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 259 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 438
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 439 GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
G + ++C +GG +L R+L HVV TPGR+
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRL 218
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 91.5 bits (217), Expect = 4e-19
Identities = 54/158 (34%), Positives = 80/158 (50%)
Frame = +1
Query: 79 SEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 258
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 259 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 438
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 439 GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
G + ++C +GG +L R+L HVV TPGR+
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRL 218
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 91.1 bits (216), Expect = 5e-19
Identities = 52/154 (33%), Positives = 87/154 (56%)
Frame = +1
Query: 91 SNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 270
+ +K+++E+ +E D EDV+ +F +G+ L G+ KPS IQQ ++ +
Sbjct: 24 TKKKVVTEE---IEKDDEEDVKE-KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHAL 79
Query: 271 KGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM 450
+G+DVI A++G+GKT F+I +LQ+L + L+L+PTRELA QI + ALG +
Sbjct: 80 QGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI 139
Query: 451 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ +GG ++ L H++ TPGR+
Sbjct: 140 GLIAAVIVGGVDMAAQAMALARRPHIIVATPGRL 173
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 87.8 bits (208), Expect = 5e-18
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Frame = +1
Query: 109 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 285
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 286 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNV 456
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 457 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+ C GG +L L G VV TPGR+
Sbjct: 249 EVCLCAGGLDLKAQEAALRSGPDVVVATPGRL 280
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 309
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 200 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 259
Query: 310 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 486
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 260 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 319
Query: 487 LGEDIRKLDYGQHVVSGTPG 546
+ +R + +V GTPG
Sbjct: 320 MAA-MRGRKLTEQIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 309
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 225 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 284
Query: 310 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 486
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 285 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 344
Query: 487 LGEDIRKLDYGQHVVSGTPG 546
+ +R + +V GTPG
Sbjct: 345 MAA-MRGRKLTEQIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Frame = +1
Query: 136 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 309
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 609 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 668
Query: 310 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 486
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 669 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 728
Query: 487 LGEDIRKLDYGQHVVSGTPG 546
+ +R + +V GTPG
Sbjct: 729 MAA-MRGRKLTEQIVIGTPG 747
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 83.8 bits (198), Expect = 7e-17
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 364 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSG 537
E V+ + TRELA QI K ++ V+ GG + +D +L + H+V G
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 538 TPGRV 552
TPGR+
Sbjct: 168 TPGRM 172
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 83.8 bits (198), Expect = 7e-17
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 364 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSG 537
E V+ + TRELA QI K ++ V+ GG + +D +L + H+V G
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 538 TPGRV 552
TPGR+
Sbjct: 168 TPGRM 172
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 83.8 bits (198), Expect = 7e-17
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 363
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 47 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 106
Query: 364 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSG 537
E V+ + TRELA QI K ++ V+ GG + +D +L + H+V G
Sbjct: 107 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 166
Query: 538 TPGRV 552
TPGR+
Sbjct: 167 TPGRM 171
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 82.6 bits (195), Expect = 2e-16
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 288
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 289 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 468
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ + + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSV 122
Query: 469 CIGGTNLGEDIRKLDYGQ---HVVSGTPGRV 552
+GG+ + +D Q +V GTPGR+
Sbjct: 123 YVGGS--AHKLNLIDLKQTRPQIVIGTPGRI 151
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 82.6 bits (195), Expect = 2e-16
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 109 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 288
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 289 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 468
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ + + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSV 122
Query: 469 CIGGTNLGEDIRKLDYGQ---HVVSGTPGRV 552
+GG+ + +D Q +V GTPGR+
Sbjct: 123 YVGGS--AHKLNLIDLKQTRPQIVIGTPGRI 151
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 80.2 bits (189), Expect = 9e-16
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 5/174 (2%)
Frame = +1
Query: 46 LEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 225
+E IR+MT +EV + R E+L ++ + + I T+ G+ +++ + + +
Sbjct: 269 IETEEIRRMTKAEVKAYR----EELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEY 324
Query: 226 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ---VLILS 390
KP++IQ ++I I+ GRDVI A++G+GKT F + + + + L E +IL+
Sbjct: 325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILA 384
Query: 391 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
PTRELA Q K + ++ GG + E I L G +V TPGR+
Sbjct: 385 PTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRM 438
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 75.8 bits (178), Expect = 2e-14
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Frame = +1
Query: 196 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISILQTLDTTLR 366
LL+ + GF + IQ +SI P+++G+DV+A A++G+GKT F +I +L L+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 367 E-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTP 543
T V+I+SPTREL+ Q V+ L + N+ +GG+N + KL G ++ TP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 544 GRV 552
GR+
Sbjct: 199 GRL 201
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 74.5 bits (175), Expect = 5e-14
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Frame = +1
Query: 79 SEVSSNR-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 255
SE+S +I ED N+ + ++ G DE+ + + G+ +P+ IQ+++
Sbjct: 273 SEMSDRDWRIFREDF-NISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQA 331
Query: 256 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLR-ETQ--------VLILSPTRELA 408
I ++ RDVI A++G+GKTA F + +L + + + E Q +I++PTRELA
Sbjct: 332 IPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Query: 409 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
QI++ G + ++ + IGG + + KL G VV TPGR+
Sbjct: 392 QQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRL 439
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 73.7 bits (173), Expect = 8e-14
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Frame = +1
Query: 124 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 297
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 298 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 432
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 433 ALGDFMNVQCHACIGG-TNLGEDIRKLDYGQHVVSGTPGRV 552
N+Q GG N + + +L G H++ TPGR+
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 73.7 bits (173), Expect = 8e-14
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Frame = +1
Query: 124 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 297
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 298 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 432
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 433 ALGDFMNVQCHACIGG-TNLGEDIRKLDYGQHVVSGTPGRV 552
N+Q GG N + + +L G H++ TPGR+
Sbjct: 228 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 268
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 73.7 bits (173), Expect = 8e-14
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Frame = +1
Query: 124 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 297
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 298 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 432
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 433 ALGDFMNVQCHACIGG-TNLGEDIRKLDYGQHVVSGTPGRV 552
N+Q GG N + + +L G H++ TPGR+
Sbjct: 225 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 265
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 70.5 bits (165), Expect = 7e-13
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +1
Query: 217 YG-FEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----V 378
YG F+KP+ IQ S + GRD+I+ A++G+GKT F + L + + V
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 379 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
L+L PTRELA Q+Q+V + + ++ GG + G R L+ G +V TPGR+
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRL 263
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 68.1 bits (159), Expect = 4e-12
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Frame = +1
Query: 67 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 246
+M S+ +K++ E L + D + TF GL + +L+ I G+EK + +Q
Sbjct: 58 RMKKSQAEKRQKLM-ESLVGPQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQ 116
Query: 247 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQV----LILSPTRELA 408
+ I ++ ++++ +A++G+GKT F I ++Q L ++ + V +I++PT+EL
Sbjct: 117 ESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELI 176
Query: 409 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
TQI K+ + L + + N E+ L+ HVV TPG++
Sbjct: 177 TQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKL 224
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 67.7 bits (158), Expect = 5e-12
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 27/179 (15%)
Frame = +1
Query: 97 RKILSEDLSNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQ 246
+++ S LS + FD E++ V I F + L + + I T G+++P+ +Q
Sbjct: 134 QELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQ 193
Query: 247 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-----DTTLRET-----------QV 378
+ SI + GRD+++ AQ+G+GKTA F + ++ + D R
Sbjct: 194 KYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSA 253
Query: 379 LILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDIRKLDYGQHVVSGTPGRV 552
L+LSPTREL+ QI + GG N + I KL G H++ TPGR+
Sbjct: 254 LVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRL 312
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 348
F+ L L G+ + KP+ IQ+ +I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 349 LDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 516
L LI+SPTRELA Q I A+G C IGG+++ + ++
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS- 196
Query: 517 GQHVVSGTPGRV 552
G +++ TPGR+
Sbjct: 197 GINIIVCTPGRL 208
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 63.3 bits (147), Expect = 1e-10
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
Frame = +1
Query: 220 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-----QTLDTTLRETQ--- 375
G P+AIQ + I + GRD+I A +G+GKT TF + ++ Q + ++
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 376 VLILSPTRELATQIQKVILALGDFM------NVQCHACIGGTNLGEDIRKLDYGQHVVSG 537
LI+ P+RELA QI +I+ + D + ++ CIGG +GE + + G H+V
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVA 328
Query: 538 TPGRV 552
TPGR+
Sbjct: 329 TPGRL 333
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Frame = +1
Query: 100 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 279
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 280 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQIQKVIL 432
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 433 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ GG +G + +++ G ++ GT GR+
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Frame = +1
Query: 100 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 279
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 280 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQIQKVIL 432
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 433 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ GG +G + +++ G ++ GT GR+
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Frame = +1
Query: 175 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 354
+ G ++ I GFEKPS IQ + ++ G+D I +Q+G+GKT F + L +D
Sbjct: 88 AFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHID 147
Query: 355 TTLRETQ-----------VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 501
L + + VL+LSPTRELA QI+ + + + GG + E +
Sbjct: 148 AQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY-SYNGYKSVCLYGGGSRPEQV 206
Query: 502 RKLDYGQHVVSGTPGRV 552
G +V TPGR+
Sbjct: 207 EACRGGVEIVIATPGRL 223
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Frame = +1
Query: 100 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 279
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 280 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQIQKVIL 432
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 433 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++ GG +G + +++ G ++ GT GR+
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 6e-10
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Frame = +1
Query: 151 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 330
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 331 ISIL-QTLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 483
+ I+ + +D T + +IL+PTREL QI ++ GG
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGL 667
Query: 484 NLGEDIRKLDYGQHVVSGTPGRV 552
+G + +++ G ++ GT GR+
Sbjct: 668 AVGYNKGQIEKGATIIVGTVGRI 690
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 60.9 bits (141), Expect = 6e-10
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Frame = +1
Query: 151 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 330
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 331 ISIL-QTLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 483
+ I+ + +D T + +IL+PTREL QI ++ GG
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGL 667
Query: 484 NLGEDIRKLDYGQHVVSGTPGRV 552
+G + +++ G ++ GT GR+
Sbjct: 668 AVGYNKGQIEKGATIIVGTVGRI 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 6e-10
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Frame = +1
Query: 151 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 330
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 331 ISIL-QTLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 483
+ I+ + +D T + +IL+PTREL QI ++ GG
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGL 667
Query: 484 NLGEDIRKLDYGQHVVSGTPGRV 552
+G + +++ G ++ GT GR+
Sbjct: 668 AVGYNKGQIEKGATIIVGTVGRI 690
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 60.1 bits (139), Expect = 1e-09
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Frame = +1
Query: 82 EVSSNRKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 234
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 235 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 387
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 388 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+PTRELA QI ++ GG N+G + ++ G ++ GT GRV
Sbjct: 382 TPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 60.1 bits (139), Expect = 1e-09
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Frame = +1
Query: 82 EVSSNRKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 234
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 235 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 387
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 388 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+PTRELA QI ++ GG N+G + ++ G ++ GT GRV
Sbjct: 382 TPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 58.8 bits (136), Expect = 2e-09
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL------ 342
L +E+L I GF +P+ IQ + V+ R DV+ A++G+GKT F I ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 343 -----QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 507
+T T +R + LI++PTREL QI K I AL + + +GG + R
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERI 281
Query: 508 LDYGQ-HVVSGTPGRV 552
+ + +V TPGR+
Sbjct: 282 ISQQRPDIVVATPGRL 297
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 55.6 bits (128), Expect = 2e-08
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Frame = +1
Query: 127 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 306
VE +E + ++ + GL +L + + IQ I ++ G DV+ QA++
Sbjct: 369 VEIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETS 428
Query: 307 TGKTATFSISILQTLDTTLRETQ----------VLILSPTRELATQIQKVILALGDFMNV 456
GKTA F + I+ + ET+ LIL+PTRELA QI + + ++
Sbjct: 429 AGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDI 488
Query: 457 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
G ++ + ++ G ++ GT GR+
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGCDILIGTCGRI 520
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 55.2 bits (127), Expect = 3e-08
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Frame = +1
Query: 196 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF----SISILQTLDTTL 363
L+ I +E+P+ IQ +I + GRDV+ A++G+GKTA + + I+ D
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 364 RETQV-LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVVSG 537
E V +I+ PTRELA Q+ + N+ GG + E +L + G +V
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVC 395
Query: 538 TPGRV 552
TPGR+
Sbjct: 396 TPGRI 400
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 53.6 bits (123), Expect = 9e-08
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Frame = +1
Query: 208 IYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL-----------QTL 351
I+ + F +P+ IQ + V+ R DV+ A++G+GKT F I ++ +T
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 352 DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HV 528
T +R + LI++PTREL QI K I AL + + +GG + R + + +
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDI 122
Query: 529 VSGTPGRV 552
V TPGR+
Sbjct: 123 VVATPGRL 130
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Frame = +1
Query: 184 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTT- 360
L ELL ++ ++ + +Q S ++ DV+ ++ +G+GKT F + +++ +
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 361 LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVV 531
L+ + LILSP+REL +QI VI + +N+ GG + ++I+ + +++
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNIL 135
Query: 532 SGTPGRV 552
TPGR+
Sbjct: 136 VATPGRL 142
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 51.6 bits (118), Expect = 4e-07
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Frame = +1
Query: 67 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 243
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 244 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 393
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 394 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQ-HVVSGTPGRV 552
TREL Q L ++C GG + +++ L + Q +++ T GR+
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 51.6 bits (118), Expect = 4e-07
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Frame = +1
Query: 67 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 243
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 244 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 393
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 394 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQ-HVVSGTPGRV 552
TREL Q L ++C GG + +++ L + Q +++ T GR+
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Frame = +1
Query: 157 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 336
+I F + LL + +PS IQ +SI + + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 337 IL-------QTLDTTLRETQVL---ILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 486
++ Q D + + L +L PTRELA Q +F+ + I N
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ------TYTEFLKYCANTSISAAN 237
Query: 487 LGEDIRKLDYGQHVVSGTPGRV 552
+ + + +VS TP R+
Sbjct: 238 FSGEETDIQHADILVS-TPNRI 258
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 169 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
F+ G+ EL + + + P+A+Q +I I+ G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 274 GRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN 453
G +A AQ+ G +S + ++D++ +IL PTREL Q + I ++
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSST--PLCVILEPTRELVQQTFQNIQTFASVLD 309
Query: 454 ---VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
++C G N+ + +R L+ G +V GTP RV
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRV 345
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.1 bits (77), Expect = 0.034
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Frame = +1
Query: 40 KNLEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTY 219
KNLEA K+TSS V N S + ++ TS+ + I + + + +
Sbjct: 85 KNLEA---LKVTSSWVQ-NATTFS---ATIDSSTSQKLSQIELPEHLTVPSAISTWFPVQ 137
Query: 220 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT-TLRETQVLILSPT 396
PS + P ++ RDV A +G+GKT + + +L + + + Q +IL P
Sbjct: 138 YAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPV 197
Query: 397 RELATQIQKVILALGDFMNVQCHACIGGTN-LGEDIRKL-DYGQHVVSGTPGRV 552
+ L QI D V + G N ++ R+L +V+ TP R+
Sbjct: 198 QTLVAQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARL 251
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.10
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 220 GFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPT 396
GF+ + IQ + + + + VI A +G+GKTA +++L+ + T E + + ++P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 397 RELATQI 417
++AT++
Sbjct: 1377 EDMATKV 1383
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 235 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 345
+A+QQ SI I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 283 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 462
V Q GTGKT T ++ + + + ++ QV++L+PTRE I+ + M ++
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 463 H 465
H
Sbjct: 142 H 142
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.32
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Frame = +1
Query: 241 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT---------LDTTLRETQVLILSP 393
+QQ SI I +GR ++ +A +G GKT F I ++ ++T +LI++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 394 TRELATQI 417
T L Q+
Sbjct: 79 TSALVDQL 86
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 379 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRV 552
+I++PT+EL TQI K+ + L + + N E+ L+ HVV TPG++
Sbjct: 100 VIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKL 157
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 235 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 381
+A+QQ+SI I R ++ A +G GKT F ++ ++ LRE +L
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRERPLL 161
>AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical
protein Y7A5A.11 protein.
Length = 162
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -1
Query: 281 SLPLTIGKMLLC*IAEGF-SKPYVYIPRNNSS---RSPMESKVGITSTSSLVSNSTFD 120
++PLT LC + + S+ ++Y+PR+NSS R ++ +G S ++ TF+
Sbjct: 13 AVPLTYSSSCLCSLRQSIKSESHMYVPRHNSSVLVRGSKDADIGERSDTTSKFTKTFN 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,249,769
Number of Sequences: 27780
Number of extensions: 246157
Number of successful extensions: 882
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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