Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_G08
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.0  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 83 GIHRQKSLRPS*FEKLCNYCTTPAKW 6
          G++R K L    F+ L   CTT + W
Sbjct: 12 GVNRCKLLSCKDFDTLYRDCTTASSW 37


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +1

Query: 79  IPAQRLSKILQQSDKQRKIKYGQSHICSNGSSHPLLHTET*IQEMNYKQNLL 234
           +P ++L   L QS +++      S  C NG+   L   +  IQE+  +++LL
Sbjct: 26  LPEEKLLDALCQSFRKQN-----SSSCGNGNRCDLWSEKFPIQELKSQESLL 72


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 226 FACNSFLGFRFQCEVKD 176
           F CNSF  F F     D
Sbjct: 443 FICNSFTKFEFNTVFND 459


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 96   KPLSWDSSTEESP 58
            KP +W SST  SP
Sbjct: 1038 KPSTWWSSTTTSP 1050


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,696
Number of Sequences: 336
Number of extensions: 1126
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)