Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_G06
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 584 FFFXTLHLLFYSRLYCFN*PYISIIWFY 501
           F   T+HLLF   +Y F  P   ++  Y
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIY 147



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 584 FFFXTLHLLFYSRLYCFN*PYISIIWFY 501
           F   T+HLLF   +Y F    I ++  Y
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLCIY 299


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 349 FPFYILSKCNHRFNRVFILNIFVFAKFF 266
           FPF   S     FN VF     VFA F+
Sbjct: 441 FPFICNSFTKFEFNTVFNDQRTVFANFY 468


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 139 Y*KPWYNIYY 110
           Y  PWYN YY
Sbjct: 33  YCDPWYNPYY 42


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 452 HAILEDGTEAPRPC 493
           H +L  GTEA  PC
Sbjct: 584 HMLLPKGTEAGYPC 597


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 304 VFILNIFVFAKFFIYFY 254
           +++L I +FA +F Y +
Sbjct: 378 IYVLLINIFASYFAYIF 394


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 304 VFILNIFVFAKFFIYFY 254
           +++L I +FA +F Y +
Sbjct: 378 IYVLLINIFASYFAYIF 394


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 304 VFILNIFVFAKFFIYFY 254
           +++L I +FA +F Y +
Sbjct: 378 IYVLLINIFASYFAYIF 394


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 304 VFILNIFVFAKFFIYFY 254
           +++L I +FA +F Y +
Sbjct: 378 IYVLLINIFASYFAYIF 394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,403
Number of Sequences: 336
Number of extensions: 2353
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)