Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_G01
(886 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 46 5e-07
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 40 4e-05
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 40 4e-05
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 36 7e-04
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 29 0.057
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 2.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 4.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 660 DLLLPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSGDLYIXGLKWSDMGNYTCVAKN 839
D+ LPC +V W+ V + R+R LP G L+I + +D G Y+C +N
Sbjct: 1293 DVKLPCLAVGVPAPEVTWKV--RGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVEN 1350
Query: 840 IYGKDT 857
+G DT
Sbjct: 1351 TFGHDT 1356
Score = 38.3 bits (85), Expect = 9e-05
Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 6/192 (3%)
Frame = +3
Query: 309 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEEA-TNEVVLTDPESFAKIVSKLVVVAP-- 479
G + L+C+ G P P + W +G+ + E + V + + +VS L + +
Sbjct: 408 GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGD----VVSHLNISSTHT 463
Query: 480 TDGDRYTCAASA--GLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNI 653
DG Y C A++ G SA VY P I H
Sbjct: 464 NDGGLYKCIAASKVGSAEHSARLNVYGL------------------PFIR-HMDKKAIVA 504
Query: 654 GTDLLLPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSGDLYIXGL-KWSDMGNYTCV 830
G L + C V Y + W+ + V + +V P+G L I + + SD YTCV
Sbjct: 505 GETLRVTCPVAGYPIESIVWER--DTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCV 562
Query: 831 AKNIYGKDTGST 866
A+N G T
Sbjct: 563 ARNAQGYSARGT 574
Score = 29.9 bits (64), Expect = 0.033
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +3
Query: 303 TTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVVLTDPESFAKIVSKLVVVAPT 482
T ++L CL +G PAP V W G ++ + L + F K V + T
Sbjct: 1289 TYKEDVKLPCLAVGVPAPEVTWKVRGAVLQSSDRLRQ---LPEGSLFIKEVDR------T 1339
Query: 483 DGDRYTCAASAGLKRDSAT 539
D Y+C D+ T
Sbjct: 1340 DAGEYSCYVENTFGHDTVT 1358
Score = 28.7 bits (61), Expect = 0.075
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 273 SQAPPDTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPI 389
++ P T G C + G P V WLK+G+P+
Sbjct: 310 AEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 282 PPDTVHHTTGSQLELECLIIGKPAPIVEWLK 374
PP+ V + G+ +EC G P P + W++
Sbjct: 9 PPNRVDFSNGTGAVVECQARGNPQPDIIWVR 39
Score = 27.5 bits (58), Expect = 0.17
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +3
Query: 642 FQNIGTDLLLPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSGDLYIXGLKWSDMGN- 818
F N GT ++ C+ + + W D + V G +VLP+G+L + D
Sbjct: 15 FSN-GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQE 73
Query: 819 -----YTCVAKNIYG 848
Y+C+A++ G
Sbjct: 74 VHAQVYSCLARSPAG 88
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 777 DLYIXGLKWSDMGNYTCVAKNIYGKDTGS 863
DL I + SD +TCVA N +G D S
Sbjct: 839 DLSIKRTERSDSALFTCVATNAFGSDDTS 867
Score = 25.8 bits (54), Expect = 0.53
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 753 RIRVLPSGDLYIXGLKWSDMGNYTCVAKNIYGKDTGSTFI 872
R+R + SG L I + D G Y C+ N G ++ T +
Sbjct: 264 RVRQV-SGTLIIREARVEDSGKYLCIVNNSVGGESVETVL 302
Score = 23.8 bits (49), Expect = 2.1
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +3
Query: 654 GTDLLLPCRVFSYAKTQVYWQ--YGDNNLVYXTFGRIR---VLPSGDLYIXGLKWSDMGN 818
G+D + C+ + K QV W+ GD Y + G L I ++ ++ G
Sbjct: 693 GSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGY 752
Query: 819 YTCVAKNIYG 848
Y C A N G
Sbjct: 753 YLCEAVNGIG 762
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 750 GRIRVLPSGDLYIXGLKWSD-MGNYTCVAKN 839
G+ VLPSG+L+I + D Y C K+
Sbjct: 155 GKYLVLPSGELHIRDVGPEDGYKTYQCRTKH 185
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 39.5 bits (88), Expect = 4e-05
Identities = 50/184 (27%), Positives = 71/184 (38%), Gaps = 4/184 (2%)
Frame = +3
Query: 309 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEE-ATNEVVLTDPESFAKIVSKLVVVAPTD 485
G + L+C G P P V W +G + + V + + + V+V D
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVE--D 493
Query: 486 GDRYTCAAS--AGLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIGT 659
G Y+C A AG +A VY + + P +T AV G
Sbjct: 494 GGEYSCMAENRAGKVTHAARLNVY------------GLPYIRLIPKVT----AV---AGE 534
Query: 660 DLLLPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSGDLYIXGL-KWSDMGNYTCVAK 836
L L C V Y ++ W+ + L R +VLP G L I + K D G YTC A+
Sbjct: 535 TLRLKCPVAGYPIEEIKWERANRELPDDL--RQKVLPDGTLVITSVQKKGDAGVYTCSAR 592
Query: 837 NIYG 848
N G
Sbjct: 593 NKQG 596
Score = 37.9 bits (84), Expect = 1e-04
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 711 WQYGDNNLVYXTFGR-IRVLPSGDLYIXGLKWSDMGNYTCVAKNIYGKD 854
W G + R I++LPSG+L + L+ D G+YTC +N G D
Sbjct: 1345 WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGND 1393
Score = 30.3 bits (65), Expect = 0.025
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Frame = +3
Query: 654 GTDLLLPCRVFSYAKTQVYWQYGDN-----NLVYXTFGRIRVLPSG---DLYIXGLKWSD 809
G L C V V W G + Y + V P G L I + SD
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 881
Query: 810 MGNYTCVAKNIYGKD 854
G Y C A N+YG+D
Sbjct: 882 SGAYFCQASNLYGRD 896
Score = 27.5 bits (58), Expect = 0.17
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 654 GTDLLLPCRVFSYAKTQVY---WQYGDNNLVYXTF---GRIRVLPSGDLYIXGLKWSD-M 812
G +L C V S+ K V W + +Y + G+ +LP+G+L + L++SD +
Sbjct: 145 GCTAVLRCVVPSFVKDLVRVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHSLEFSDQI 204
Query: 813 GNYTC 827
Y C
Sbjct: 205 HGYRC 209
Score = 26.2 bits (55), Expect = 0.40
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 282 PPDTVHHTTGSQLELECLIIGKPAPIVEW-LKNGEPIEE 395
PP V + S L+C G P ++W +G P+ +
Sbjct: 36 PPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPVND 74
Score = 26.2 bits (55), Expect = 0.40
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +3
Query: 279 APPDTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVVLTDPESFAKIVS 458
AP V G L C + G V WLK G+ IE V + + +++
Sbjct: 812 APSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGK-IELNPSTNYRVTVKREVTPDGVIA 870
Query: 459 KLVV--VAPTDGDRYTCAASAGLKRD 530
+L + +D Y C AS RD
Sbjct: 871 QLQISSAEASDSGAYFCQASNLYGRD 896
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 807 DMGNYTCVAKNIYGKDT 857
D G Y+C+A+N GK T
Sbjct: 493 DGGEYSCMAENRAGKVT 509
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 780 LYIXGLKWSDMGNYTCVAKN 839
L I L G+YTCVA N
Sbjct: 674 LSITNLAAEHSGDYTCVAAN 693
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 39.5 bits (88), Expect = 4e-05
Identities = 50/184 (27%), Positives = 71/184 (38%), Gaps = 4/184 (2%)
Frame = +3
Query: 309 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEE-ATNEVVLTDPESFAKIVSKLVVVAPTD 485
G + L+C G P P V W +G + + V + + + V+V D
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVE--D 493
Query: 486 GDRYTCAAS--AGLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIGT 659
G Y+C A AG +A VY + + P +T AV G
Sbjct: 494 GGEYSCMAENRAGKVTHAARLNVY------------GLPYIRLIPKVT----AV---AGE 534
Query: 660 DLLLPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSGDLYIXGL-KWSDMGNYTCVAK 836
L L C V Y ++ W+ + L R +VLP G L I + K D G YTC A+
Sbjct: 535 TLRLKCPVAGYPIEEIKWERANRELPDDL--RQKVLPDGTLVITSVQKKGDAGVYTCSAR 592
Query: 837 NIYG 848
N G
Sbjct: 593 NKQG 596
Score = 37.9 bits (84), Expect = 1e-04
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 711 WQYGDNNLVYXTFGR-IRVLPSGDLYIXGLKWSDMGNYTCVAKNIYGKD 854
W G + R I++LPSG+L + L+ D G+YTC +N G D
Sbjct: 1341 WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGND 1389
Score = 30.3 bits (65), Expect = 0.025
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Frame = +3
Query: 654 GTDLLLPCRVFSYAKTQVYWQYGDN-----NLVYXTFGRIRVLPSG---DLYIXGLKWSD 809
G L C V V W G + Y + V P G L I + SD
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 877
Query: 810 MGNYTCVAKNIYGKD 854
G Y C A N+YG+D
Sbjct: 878 SGAYFCQASNLYGRD 892
Score = 27.5 bits (58), Expect = 0.17
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 654 GTDLLLPCRVFSYAKTQVY---WQYGDNNLVYXTF---GRIRVLPSGDLYIXGLKWSD-M 812
G +L C V S+ K V W + +Y + G+ +LP+G+L + L++SD +
Sbjct: 145 GCTAVLRCVVPSFVKDLVRVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHSLEFSDQI 204
Query: 813 GNYTC 827
Y C
Sbjct: 205 HGYRC 209
Score = 26.2 bits (55), Expect = 0.40
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 282 PPDTVHHTTGSQLELECLIIGKPAPIVEW-LKNGEPIEE 395
PP V + S L+C G P ++W +G P+ +
Sbjct: 36 PPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPVND 74
Score = 26.2 bits (55), Expect = 0.40
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +3
Query: 279 APPDTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVVLTDPESFAKIVS 458
AP V G L C + G V WLK G+ IE V + + +++
Sbjct: 808 APSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGK-IELNPSTNYRVTVKREVTPDGVIA 866
Query: 459 KLVV--VAPTDGDRYTCAASAGLKRD 530
+L + +D Y C AS RD
Sbjct: 867 QLQISSAEASDSGAYFCQASNLYGRD 892
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 780 LYIXGLKWSDMGNYTCVAKNI 842
L I L GNY+CVA+N+
Sbjct: 670 LMIEHLSPDHNGNYSCVARNL 690
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 807 DMGNYTCVAKNIYGKDT 857
D G Y+C+A+N GK T
Sbjct: 493 DGGEYSCMAENRAGKVT 509
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 35.5 bits (78), Expect = 7e-04
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 315 QLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVVLTDPESFAKIVSKLVVVAPTDGDR 494
+ + C + G+P P V+WLKN E + + +++ + K++ K V A T
Sbjct: 418 EANIRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLI----GNGTKLIIKNVDYADTGA-- 471
Query: 495 YTCAASA--GLKRDSATTTV 548
Y C AS+ G+ RD ++ V
Sbjct: 472 YMCQASSIGGITRDISSLVV 491
Score = 33.5 bits (73), Expect = 0.003
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 621 TLHYSAVFQNIGTDLLLPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSGDLYIXGLK 800
+L + + +G ++ + C V + W+ +L IRV G LY+ ++
Sbjct: 314 SLEVNHISARVGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQ 373
Query: 801 WSDMGNYTCVA 833
GNYTC A
Sbjct: 374 LIHAGNYTCHA 384
Score = 32.3 bits (70), Expect = 0.006
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 1/181 (0%)
Frame = +3
Query: 309 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVVLTDPESFAKIVSKLVVVAPTDG 488
G +E++C + G P P + W +NG +E E V D + L V
Sbjct: 325 GDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIR-VFNDGSLY------LTKVQLIHA 377
Query: 489 DRYTCAASAGLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIGTDLL 668
YTC A +D T V T +K +T + A + + +
Sbjct: 378 GNYTCHAVR--NQDVVQTHVLT-----------IHTIPEVK--VTPRFQA--KRLKEEAN 420
Query: 669 LPCRVFSYAKTQVYWQYGDNNLVYXTFGRIRVLPSG-DLYIXGLKWSDMGNYTCVAKNIY 845
+ C V +V W D L + + ++ +G L I + ++D G Y C A +I
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQASSIG 480
Query: 846 G 848
G
Sbjct: 481 G 481
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 255 KNFAHISQAPPDTVHHTTGSQLELECLIIGKPAPIVEWLKNG 380
K+ A I +A + + G ++ C+ G P P + WLK+G
Sbjct: 19 KDGARIVKASHFELDYMLGRKITFFCMATGFPRPEITWLKDG 60
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 288 DTVHHTTGSQLELECLIIGKPAPI 359
D V H +GS+ E E + I P I
Sbjct: 179 DVVQHQSGSEAEAEFVCIATPEAI 202
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 345 SL*SDIPALIASQWYDARCR 286
SL ++ L+ QWYD R R
Sbjct: 104 SLKYEVEFLLQQQWYDPRLR 123
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 345 SL*SDIPALIASQWYDARCR 286
SL ++ L+ QWYD R R
Sbjct: 104 SLKYEVEFLLQQQWYDPRLR 123
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 345 SL*SDIPALIASQWYDARCR 286
SL ++ L+ QWYD R R
Sbjct: 155 SLKYEVEFLLQQQWYDPRLR 174
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 345 SL*SDIPALIASQWYDARCR 286
SL ++ L+ QWYD R R
Sbjct: 104 SLKYEVEFLLQQQWYDPRLR 123
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 748 LAG*ECCRPGTCTSXASS 801
L G E C+ G CT SS
Sbjct: 116 LVGKEACKQGVCTVEVSS 133
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 748 LAG*ECCRPGTCTSXASS 801
L G E C+ G CT SS
Sbjct: 116 LVGKEACKQGVCTVEVSS 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,911
Number of Sequences: 438
Number of extensions: 5337
Number of successful extensions: 50
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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