Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F22
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 406 e-113
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 406 e-113
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 191 3e-91
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 251 4e-67
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 205 3e-53
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 205 3e-53
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 180 9e-46
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 7e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 7e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 85 8e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 85 8e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 85 8e-17
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 84 1e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.012
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.20
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.34
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.34
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.45
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 1.4
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 1.4
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.8
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.2
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 3.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 3.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 3.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 3.2
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 4.2
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 4.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 5.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 9.8
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 406 bits (999), Expect = e-113
Identities = 188/218 (86%), Positives = 200/218 (91%)
Frame = +1
Query: 145 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 324
IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 325 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 504
TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQ
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQ 147
Query: 505 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 684
LIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 148 LIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 207
Query: 685 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 798
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P
Sbjct: 208 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 245
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 798 PWRLPLQDVYXIGGIGTVP 854
P RLPLQDVY IGGIGTVP
Sbjct: 245 PLRLPLQDVYKIGGIGTVP 263
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 406 bits (999), Expect = e-113
Identities = 188/218 (86%), Positives = 200/218 (91%)
Frame = +1
Query: 145 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 324
IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 325 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 504
TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQ
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQ 147
Query: 505 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 684
LIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 148 LIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 207
Query: 685 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 798
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P
Sbjct: 208 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 245
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 798 PWRLPLQDVYXIGGIGTVP 854
P RLPLQDVY IGGIGTVP
Sbjct: 245 PLRLPLQDVYKIGGIGTVP 263
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 191 bits (466), Expect(2) = 3e-91
Identities = 87/90 (96%), Positives = 90/90 (100%)
Frame = +1
Query: 145 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 324
IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 325 TIIDAPGHRDFIKNMITGTSQADCAVLIVA 414
TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 162 bits (394), Expect(2) = 3e-91
Identities = 72/98 (73%), Positives = 82/98 (83%)
Frame = +1
Query: 505 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 684
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 685 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 798
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 211
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 798 PWRLPLQDVYXIGGIGTVP 854
P RLPLQDVY IGGIGTVP
Sbjct: 211 PLRLPLQDVYKIGGIGTVP 229
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 251 bits (615), Expect = 4e-67
Identities = 122/145 (84%), Positives = 129/145 (88%)
Frame = +1
Query: 145 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 324
IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 325 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 504
TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQ
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQ 147
Query: 505 LIVGVNKMDSTEPPYSEPRFEEIKK 579
L V+ T P S R + I++
Sbjct: 148 L---VSLRSPTRSPDSSRRSDTIQR 169
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = +2
Query: 569 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 748
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 749 LKLSMPSCH 775
+L PS H
Sbjct: 212 SRLLTPSSH 220
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 205 bits (501), Expect = 3e-53
Identities = 103/213 (48%), Positives = 145/213 (68%), Gaps = 1/213 (0%)
Frame = +1
Query: 163 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP 342
+D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAP
Sbjct: 197 VDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAP 256
Query: 343 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 522
GH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VN
Sbjct: 257 GHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVN 316
Query: 523 KMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 699
K+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+
Sbjct: 317 KLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY- 370
Query: 700 GWQVERKEGKADGKCLIEALDAILPPARPTDKP 798
DG CL+E +D+ + P P+D P
Sbjct: 371 -----------DGPCLLELIDSFVAPQPPSDGP 392
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 72 EKTHINIVVIGHVDSGKSTTTGHL 143
+K IN++V+GHVD+GKST GHL
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHL 190
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 205 bits (501), Expect = 3e-53
Identities = 103/213 (48%), Positives = 145/213 (68%), Gaps = 1/213 (0%)
Frame = +1
Query: 163 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP 342
+D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAP
Sbjct: 215 VDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAP 274
Query: 343 GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVN 522
GH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VN
Sbjct: 275 GHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVN 334
Query: 523 KMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 699
K+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+
Sbjct: 335 KLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY- 388
Query: 700 GWQVERKEGKADGKCLIEALDAILPPARPTDKP 798
DG CL+E +D+ + P P+D P
Sbjct: 389 -----------DGPCLLELIDSFVAPQPPSDGP 410
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 72 EKTHINIVVIGHVDSGKSTTTGHL 143
+K IN++V+GHVD+GKST GHL
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHL 208
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 180 bits (439), Expect = 9e-46
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 1/211 (0%)
Frame = +1
Query: 145 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 324
++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K +
Sbjct: 130 MFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHF 189
Query: 325 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 504
TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK
Sbjct: 190 TILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKH 249
Query: 505 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST 681
L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G + + T
Sbjct: 250 LVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPT 309
Query: 682 KMPWFKGWQVERKEGKADGKCLIEALDAILP 774
W G C IE +D +LP
Sbjct: 310 GSE--GNWY--------SGPCFIEFIDVLLP 330
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 66 GKEKTHINIVVIGHVDSGKSTTTGHL 143
G K HIN+V +GHVD+GKST G L
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQL 129
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 88.2 bits (209), Expect = 7e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 420
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 421 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 600
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 601 KIGYNPAAVAFV 636
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 75 KTHINIVVIGHVDSGKSTTT 134
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 88.2 bits (209), Expect = 7e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 420
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 421 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 600
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 601 KIGYNPAAVAFV 636
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 75 KTHINIVVIGHVDSGKSTTT 134
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 84.6 bits (200), Expect = 8e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 420
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 421 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 594
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 595 IKKIGY 612
+ + GY
Sbjct: 197 LNEFGY 202
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 69 KEKTHINIVVIGHVDSGKSTTT 134
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 84.6 bits (200), Expect = 8e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 420
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 421 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 594
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 595 IKKIGY 612
+ + GY
Sbjct: 198 LNEFGY 203
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 69 KEKTHINIVVIGHVDSGKSTTT 134
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 84.6 bits (200), Expect = 8e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 420
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 421 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 594
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 595 IKKIGY 612
+ + GY
Sbjct: 198 LNEFGY 203
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 69 KEKTHINIVVIGHVDSGKSTTT 134
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 145 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 264
IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +1
Query: 238 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 417
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 418 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 531
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 322 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 501
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 502 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 672
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 84 INIVVIGHVDSGKSTTT 134
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 211 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 387
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 388 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 531
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 420
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 421 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 531
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 238 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 417
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 418 GTG 426
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 498
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 499 KQLIVGVNKMDSTEPPYSEPRFEEI 573
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 524 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 396
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 244 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 408
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 409 VAAGTG 426
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 244 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 408
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 409 VAAGTG 426
V A G
Sbjct: 107 VDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.45
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 328 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 507
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 508 IVGVNKMDSTEPPYSEPR 561
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 39 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHL 143
++IRD P K+ + V+G+VD+GKST G L
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 39 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHL 143
++IRD P K+ + V+G+VD+GKST G L
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 277 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 426
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
M +++ N+ VI HVD GKST T L
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 277 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 426
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGHL 143
M +++ N+ VI HVD GKST T L
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 166 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 267
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 166 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 267
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 352 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 519
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 520 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 669
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 670 EPSTKMPWFKGWQVER 717
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 352 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 519
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 520 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 669
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 670 EPSTKMPWFKGWQVER 717
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 84 INIVVIGHVDSGKSTTT 134
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 507 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 349
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 348 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 229
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 322 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 417
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,686,853
Number of Sequences: 27780
Number of extensions: 455379
Number of successful extensions: 1385
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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