Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F21
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58761| Best HMM Match : Glyco_transf_25 (HMM E-Value=3.4) 61 8e-10
SB_55537| Best HMM Match : GreA_GreB (HMM E-Value=2.3) 38 0.005
SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5) 32 0.40
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 31 0.70
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 31 0.70
SB_9709| Best HMM Match : WHEP-TRS (HMM E-Value=0.0041) 31 0.93
SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 29 2.8
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_49533| Best HMM Match : Ldh_2 (HMM E-Value=0) 25 4.2
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 28 4.9
SB_47306| Best HMM Match : I-set (HMM E-Value=0) 28 4.9
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 28 4.9
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 6.5
SB_54449| Best HMM Match : bZIP_2 (HMM E-Value=1.2) 28 6.5
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 6.5
SB_29183| Best HMM Match : DUF1279 (HMM E-Value=0.89) 28 6.5
SB_25360| Best HMM Match : Bin3 (HMM E-Value=9.5) 28 6.5
SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10) 28 6.5
SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.6
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_49120| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-08) 27 8.6
SB_45137| Best HMM Match : Involucrin2 (HMM E-Value=0.59) 27 8.6
SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.6
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_4211| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 27 8.6
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 27 8.6
SB_33977| Best HMM Match : CUE (HMM E-Value=0.52) 27 8.6
SB_24294| Best HMM Match : RVT_2 (HMM E-Value=0) 27 8.6
SB_22817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_22178| Best HMM Match : Involucrin2 (HMM E-Value=2.6) 27 8.6
SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 27 8.6
SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 27 8.6
SB_4457| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_58761| Best HMM Match : Glyco_transf_25 (HMM E-Value=3.4)
Length = 320
Score = 60.9 bits (141), Expect = 8e-10
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Frame = +2
Query: 149 MSD-DEVIKFEITDYDXDNE-----FNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQR 310
M+D DE+ FEITD D + F + K KE+ IYG+WA+ DDE
Sbjct: 1 MADHDEMEDFEITDQDLMHAGLGLGFRHRKSSKRAKEEAIYGLWAEHDSDDEGGYGGG-- 58
Query: 311 IRKPKDFSAPIGFVAGGVQQAGK-KKDKTKEIKPAEASTSAPKYSDSSD--------EEP 463
R+ KD+S P+ F++GG+ Q GK KK+ +E +S + D+ D +
Sbjct: 59 -RRKKDYSRPLSFISGGIVQKGKDKKEDGEEENEENQGSSEEEERDTRDPYRSKKLFKGQ 117
Query: 464 EVPXASDTAGIRRQGQGMRPPSLGGNVG 547
+ S T ++ +G P L N+G
Sbjct: 118 GLQQTSTTHAVQEEGAAFSMPELVYNLG 145
>SB_55537| Best HMM Match : GreA_GreB (HMM E-Value=2.3)
Length = 126
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 272 SDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKP-AEASTSAPKY-SD 445
+DDD+++D+ R+ RK ++P+G + KK D+ KP + A +S Y D
Sbjct: 37 TDDDDDDDDERRLQRKKHSVASPLGKIL-----LKKKTDEPAAKKPKSSALSSLVAYDGD 91
Query: 446 SSDEEPEVPXA 478
SSDEE E P A
Sbjct: 92 SSDEEEEEPSA 102
>SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5)
Length = 873
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 230 ANKEQQIYGVWAKDSDDDENEDNVRQRIRKPKD-FSAPIGF 349
A K ++ W D DD++ED+ + IRK K+ +AP+ F
Sbjct: 423 ATKRLRVKSAWIDDEADDDDEDDEFKDIRKLKEQLAAPLDF 463
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 365 QQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQGQGMRPPSLGGNV 544
QQA + K ++K+ +A++ + SDS+ ++P+ D G +GQ +P + G +
Sbjct: 833 QQASQAKQESKQTDIYDANSQSGS-SDSTVKDPKSESNKDEKGQAAEGQSNKPSNQGASD 891
Query: 545 G 547
G
Sbjct: 892 G 892
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/84 (26%), Positives = 45/84 (53%)
Frame = +2
Query: 215 GRGRKANKEQQIYGVWAKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKT 394
G+G++A++EQ++ AK DD+N+ RQ + P G V G Q+ G+ +D++
Sbjct: 614 GQGQEASEEQKVAEEEAKPPGDDQNQTQERQGQTEQTHGPDP-GEVQG--QEQGQGQDQS 670
Query: 395 KEIKPAEASTSAPKYSDSSDEEPE 466
++ E S + + +++ P+
Sbjct: 671 -HVQGQEEGHSQDQGQEGTNQVPQ 693
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 31.1 bits (67), Expect = 0.70
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +2
Query: 197 DNEFNPGRGRKANKEQQ-IYGVWAKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQA 373
D N G+G+ + E+ + V+ D DD +ED R + + D A + + G
Sbjct: 150 DQGSNSGKGKPTHLEKMSLEDVFGSDLDD--SEDEDRAKSARETDEKARMNELFGDSPSE 207
Query: 374 GKKKDKTKEIKPAEASTSAPKYSDSSDEE 460
G +D+ KE+K +E+ + + DS DE+
Sbjct: 208 G--EDEDKELKDSESRGRSDE--DSGDEK 232
>SB_9709| Best HMM Match : WHEP-TRS (HMM E-Value=0.0041)
Length = 83
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 350 VAGGVQQAGKKKDKTKEIK-PAEASTSAPKYSDSSDE 457
VAGG + KKKD +E K P + + SAP S+++ E
Sbjct: 25 VAGGKPKKEKKKDTKQEAKQPGKQAESAPALSEAAQE 61
>SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 140 NSKMSDDEVIKFEITDYDXDNEFNPGR-GRKANKEQQIYGVWAKDSDDDENEDNVRQRIR 316
N K DD + + D D D++ N NKE GV +D DD NE++V +
Sbjct: 430 NDKGVDDGDVDDGVNDKDVDDDVNEEDVDDGVNKEDVDDGVNKEDVDDGVNEEDVDDGVN 489
Query: 317 K 319
K
Sbjct: 490 K 490
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 155 DDEVIKFEITDYDXDNEFNPGRGRKANKEQQIY-GVWAKDSDDDENEDNVRQRIRK 319
DD V K ++ D + + + G K + + GV KD DDD NE++V + K
Sbjct: 408 DDGVNKGDVDDGVNEEDVDDGVNDKGVDDGDVDDGVNDKDVDDDVNEEDVDDGVNK 463
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 140 NSKMSDDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQ 307
N K DD+V + ++ D + + G NKE GV KD DD++ +D V +
Sbjct: 362 NDKDVDDDVNEEDVDDGVNKEDVDDG----VNKEDVDDGVNDKDVDDEDVDDGVNK 413
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 269 DSDDDENE-DNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSD 445
DS+D+E + + R ++ + + + G G+KK+K K++K + P+ +D
Sbjct: 2 DSEDEERKAEEKRLKMERKRAKKLQSNISSDGDDDGGEKKEKRKKMKKEKERKGVPEDAD 61
Query: 446 SSDEEPE 466
+ ++ E
Sbjct: 62 TEMKKKE 68
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +2
Query: 362 VQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQGQGMRPPSLGGN 541
V G+K+DK E KPA S +P+ D + +G+ +R PS+
Sbjct: 758 VDAEGEKEDKKGEDKPAMEKAEDVDTKTDSKPDPKSEGKEDEVEVSGRGRFLRIPSVSPL 817
Query: 542 VG 547
G
Sbjct: 818 AG 819
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 28.7 bits (61), Expect = 3.7
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 131 FIANSK-MSDDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQ 307
++++S+ SD + K +ITD D+E KA + V + D E + +
Sbjct: 924 YVSSSEDSSDSDNDKLKITDVGSDDE-------KAERS----AVESHDGSGQEERASGDE 972
Query: 308 RIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASD 484
RI ++ A + K+KD+ E AEA +S+ K SSD++ E+ D
Sbjct: 973 RISDASHVTSEEEMQASDAESEEKEKDE--ESSDAEAPSSSRKRVISSDDDDELDEKLD 1029
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 293 DNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVP 472
+++ + +R P P VAG V G K ++ +PAE ST+ ++ EP VP
Sbjct: 3397 NSLLESLRGPPGPPGPASTVAGPVGTRGFPGLKGEKGEPAE-STNVNPFTKGVKGEPGVP 3455
Query: 473 XASDTAGIRRQGQGMRPPSLGGNVG 547
G++ + + PP L G+ G
Sbjct: 3456 ---GFPGLKGEIGLIGPPGLAGSPG 3477
>SB_49533| Best HMM Match : Ldh_2 (HMM E-Value=0)
Length = 883
Score = 25.4 bits (53), Expect(2) = 4.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 269 DSDDDENEDNVRQRIRKPKDFSAPIGFVA 355
D DDD +++ + R +K K P ++A
Sbjct: 855 DDDDDSDDNGIHDRRKKSKQPGTPAYYIA 883
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = +2
Query: 260 WAKDSDDDENED 295
W++D D++ N+D
Sbjct: 813 WSEDDDEENNDD 824
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 263 AKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYS 442
AK + + +E PK AP+ G ++A K++ ++ ++ T PK +
Sbjct: 114 AKKAAESSSESESESEEEAPKKKEAPVAKQNGKSKKAKKEESSSESDSDSDEETPTPKKT 173
Query: 443 DSSDEEPEV 469
+ EE V
Sbjct: 174 VPAKEEMSV 182
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 28.3 bits (60), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 325 RFFCTNWFCGGWSSTGW 375
++FC WFC W GW
Sbjct: 722 QWFCHQWFCHQWFCHGW 738
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 325 RFFCTNWFCGGWSS 366
++FC WFC GW S
Sbjct: 727 QWFCHQWFCHGWLS 740
>SB_47306| Best HMM Match : I-set (HMM E-Value=0)
Length = 1260
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 311 IRKPKDFSAPIGFVAG-GVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEV 469
I++ KD S PIG A + G K + + K + A ++ DEEPEV
Sbjct: 552 IKELKDTSVPIGQEAKLDARVTGSPKPEVEWFKDGKVVEDAGRFLYVEDEEPEV 605
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 263 AKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPA-EASTSAPKY 439
+K D D+ RQ RKP+D A ++ K +DK +P+ + TS P+
Sbjct: 119 SKPQDQDKQAARPRQASRKPQDKQA-------ASRKTSKPQDKQAARQPSRKTKTSKPQD 171
Query: 440 SDSSDEEP 463
D E P
Sbjct: 172 QDKQAERP 179
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 170 KFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQRIR 316
K E +YD DN+ + +ANK++ +Y +S +DE E + Q IR
Sbjct: 1573 KNEWDNYDGDNDDGDSKTIEANKDKSVY--HHSESLNDEEELHPPQLIR 1619
>SB_54449| Best HMM Match : bZIP_2 (HMM E-Value=1.2)
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 GVWAKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEAST-SA 430
G W+K + VRQ + K + F +G VA +Q+ ++ + + + + T
Sbjct: 65 GGWSKPRQLFNEDGGVRQDVAKLRGFRLAMGSVAEIIQENTERVQELQGVVATDRETIDD 124
Query: 431 PKYSDSSDEE 460
P S SS +E
Sbjct: 125 PNTSKSSRQE 134
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Frame = +2
Query: 350 VAGGVQQAGKKKDKTKE----IKPAEASTSAPKYSDSSDE--EPEVPXASDTAGIRRQGQ 511
V G+ G+K T + + P EAS + ++++ + P AS T +RRQ
Sbjct: 162 VINGIHALGRKAHSTGKTCLALGPKEASANPREFTEEQRRAGQGHTPYASKTHPLRRQNT 221
Query: 512 GMRPPSLG 535
PP G
Sbjct: 222 PPPPPKSG 229
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +2
Query: 218 RGRKANKEQQIYGVWAKDSDDDENE------DNVRQRIRKPKDFSAPIGFVAGGVQQAGK 379
+G+K +Q+ DS D+E+E DN ++ + ++ S+ + ++ K
Sbjct: 169 KGKKTQAKQESSS--EDDSSDEEDEKPKKKADNKGKKTQAKQESSSEEDDSSDEEEEKPK 226
Query: 380 KKDKTKEIKPAEASTSAPKYSDSSDEEPEVP 472
KK K +K A + DSS+EE E P
Sbjct: 227 KKADDK-VKKTPAKQESSSEDDSSNEEEEKP 256
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 269 DSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDS 448
+ +D++ + V ++ ++ S+ + + KKK K K +A + DS
Sbjct: 127 EDEDEKPKKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKG-KKTQAKQESSSEDDS 185
Query: 449 SDEEPEVP-XASDTAGIRRQGQ 511
SDEE E P +D G + Q +
Sbjct: 186 SDEEDEKPKKKADNKGKKTQAK 207
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 365 QQAGKKKDKTKEIK-PAEASTSAPKYS--DSSDEEPEVPXAS 481
++ KKK +KE K PA+ +S+ S DSSDE+ ++P S
Sbjct: 285 EEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKS 326
>SB_29183| Best HMM Match : DUF1279 (HMM E-Value=0.89)
Length = 253
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 GVWAKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEAST-SA 430
G W+K + +VRQ + K F +G VA +Q+ + + + + + T
Sbjct: 65 GGWSKPRQLFNEDGSVRQDVADLKGFKLAMGSVAEIIQENAELVQELQGVVATDRETIDD 124
Query: 431 PKYSDSSDEE 460
P S+SS +E
Sbjct: 125 PNTSESSRQE 134
>SB_25360| Best HMM Match : Bin3 (HMM E-Value=9.5)
Length = 95
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = +2
Query: 308 RIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDT 487
+I +P S + + ++Q ++ KT ++ + + + DS + EPEV ++
Sbjct: 15 KIGEPTQASIDVQLMLDAMRQGFERISKTLVSSSSDTANAISEAFDSLEGEPEVGYEDES 74
Query: 488 AGIRRQGQGMRPPS 529
+G PPS
Sbjct: 75 YHGTENHEGENPPS 88
>SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10)
Length = 892
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 362 VQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEE 460
V A KK+ K +E P P+Y+D D+E
Sbjct: 340 VYYANKKRPKPEEPDPVRPKKRPPQYNDGYDDE 372
>SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Frame = +2
Query: 221 GRKANKEQQ---IYGVWAKDSDDD----ENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGK 379
G+K ++E+Q VW +S D E+ R+R+RK +D SA ++
Sbjct: 227 GKKDSRERQGDSNADVWLSESRRDGRNSEDGQRKRERVRKGRDVSAKASSKIPVNEKEYV 286
Query: 380 KKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQGQG 514
K +T E +A + S SD E+ D G R +G
Sbjct: 287 GKARTLEESKEKARNIDTRDSKRSDGGGEMRTKGDCQGSNRGVKG 331
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 1738 KRKTKTRKPATRNAAELKEESSSEEEPD 1765
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 251 YGVWAKDSDDDENEDN 298
YG KD DDDENED+
Sbjct: 1628 YGADRKDIDDDENEDH 1643
>SB_49120| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-08)
Length = 401
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 251 YGVWAKDSDDDENEDN 298
YG KD DDDENED+
Sbjct: 348 YGADRKDIDDDENEDH 363
>SB_45137| Best HMM Match : Involucrin2 (HMM E-Value=0.59)
Length = 421
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 182 KRKTKTRKPATRNAAELKEESSSEEEPD 209
>SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1387
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 1011 KRKTKTRKPATRNAAELKEESSSEEEPD 1038
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 555 KRKTKTRKPATRNAAELKEESSSEEEPD 582
>SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 368 QAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQGQGMRPPSLGGNVG 547
+AG +++KT+E PAE AP + EE P + + + + G G
Sbjct: 9 EAGGEEEKTEEAAPAEG--EAPPAEEKPAEEESKPEENKEEEKKEESEKKEEDKTDGGGG 66
Query: 548 NWEK 559
EK
Sbjct: 67 GEEK 70
>SB_4211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 251 YGVWAKDSDDDENEDN 298
YG KD DDDENED+
Sbjct: 48 YGADRKDIDDDENEDH 63
>SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 152 SDDEVIKFEITDYDXDNEFNPGRGRKANKEQQI-YGVWAKDSDDDENEDNVRQRIRKPKD 328
S+ ++ + EI + + + +G + NKE+ + +G D DD NED + PK+
Sbjct: 38 SEPDIEQSEIQNSPAERK-TQSKGEEKNKEKGVSFGPPGNDEDDTYNEDEDDEMPEPPKN 96
>SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 182 KRKTKTRKPATRNAAELKEESSSEEEPD 209
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 365 QQAGKKKDKTKEIK-PAEASTSAPKYS--DSSDEEPEVPXAS 481
++ KKK +KE K PA+ +S+ S DSSDE+ ++P S
Sbjct: 42 EEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKS 83
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 380 KKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASD 484
+K K K+ K + YSDS DE+ EV SD
Sbjct: 734 EKKKRKKEKKRKRKHEQLSYSDSEDEKREVKSVSD 768
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 158 DEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDE--NEDNVRQRI 313
D VI ++ D D DN+ G N YG D DDDE NED + +R+
Sbjct: 314 DLVIIYDTGDKDDDND---GDDDDYNYNDDDYGDDDNDDDDDEKDNEDVMTKRM 364
>SB_33977| Best HMM Match : CUE (HMM E-Value=0.52)
Length = 1183
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +2
Query: 407 PAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQGQGMRPPSLGGN 541
PAEA A + D +EEPE S G+RR G R GGN
Sbjct: 1132 PAEAD-EAEQGEDWDEEEPEELAPS---GVRRGRSGRRQRKRGGN 1172
>SB_24294| Best HMM Match : RVT_2 (HMM E-Value=0)
Length = 627
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +2
Query: 311 IRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPE 466
+R F+A + F ++ G+ K+K+K + + + +D DE+P+
Sbjct: 236 LRNDACFTAEMSFSVKTTEKEGEVKEKSKAEQKVKEEERESETTDEKDEQPQ 287
>SB_22817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 251 YGVWAKDSDDDENEDN 298
YG KD DDDENED+
Sbjct: 63 YGADRKDIDDDENEDH 78
>SB_22178| Best HMM Match : Involucrin2 (HMM E-Value=2.6)
Length = 311
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 75 KRKTKTRKPATRNAAELKEESSSEEEPD 102
>SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 1582
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 251 YGVWAKDSDDDENEDN 298
YG KD DDDENED+
Sbjct: 626 YGADRKDIDDDENEDH 641
>SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1984
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 KDKTKEIKPAEASTSAPKYSDSSDEEPE 466
K KTK KPA + + K SS+EEP+
Sbjct: 1250 KRKTKTRKPATRNAAELKEESSSEEEPD 1277
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 158 DEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDE--NEDNVRQRI 313
D VI ++ D D DN+ G N YG D DDDE NED + +R+
Sbjct: 1827 DLVIIYDTGDKDDDND---GDDDDYNYNDDDYGDDDNDDDDDEKDNEDVMTKRM 1877
>SB_4457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1328
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 251 YGVWAKDSDDDENEDN 298
YG KD DDDENED+
Sbjct: 1217 YGADRKDIDDDENEDH 1232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,637,289
Number of Sequences: 59808
Number of extensions: 282832
Number of successful extensions: 1563
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -