Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F21
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein. 71 5e-13
Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 33 0.20
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 32 0.27
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 32 0.35
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 32 0.35
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 31 0.47
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 31 0.62
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.62
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 30 1.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ... 30 1.1
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 29 3.3
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 29 3.3
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 29 3.3
Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 28 4.4
AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical ... 28 5.8
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z35637-5|CAE17723.1| 185|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 23 9.4
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 23 9.4
>DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein.
Length = 830
Score = 71.3 bits (167), Expect = 5e-13
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +2
Query: 155 DDEVIKFEITDYDXDNEFNPG-RGRKANKEQQIYGVWAKDSDDDENEDNV-RQRIRKPKD 328
DD FEI D D + NPG R R NK+Q YGV+A DSDDD++E R +K
Sbjct: 4 DDGRESFEINDMDLEYAMNPGGRRRFQNKDQATYGVFAPDSDDDDDEQGTSRGPYKKRSK 63
Query: 329 FSAPIGFVAGGVQQAGK-KKDKTKEIKPAEASTSAPKYSD 445
SAP+ FV+GG+QQ K KD + PK D
Sbjct: 64 ISAPMSFVSGGIQQGNKIDKDDPASLNLNLGGEKKPKEDD 103
>Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical
protein C07E3.1a protein.
Length = 816
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 191 DXDNEFNPG-RGRKANKEQQIYGVWAKDSDDDENEDNV-RQRIRKPKDFSAPIGFVAGGV 364
D + NPG R R NK+Q YGV+A DSDDD++E R +K SAP+ FV+GG+
Sbjct: 2 DLEYAMNPGGRRRFQNKDQATYGVFAPDSDDDDDEQGTSRGPYKKRSKISAPMSFVSGGI 61
Query: 365 QQAGK-KKDKTKEIKPAEASTSAPKYSD 445
QQ K KD + PK D
Sbjct: 62 QQGNKIDKDDPASLNLNLGGEKKPKEDD 89
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 32.7 bits (71), Expect = 0.20
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 197 DNEFNPGRGRKANKEQQIYGVWAKDSDDD-ENEDNVRQRIRKPKDFSAPIGFVAGGVQQA 373
D NP RK K+Q+ V + DDD ++ED+ P++ S Q
Sbjct: 182 DQILNPRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDVEAPAPQEPSRK----QKAHNQR 237
Query: 374 GKKKDKTKEIKPAEASTSAPKYSDSSDEEPE 466
+KKDK K+ +P + P D D+E +
Sbjct: 238 EEKKDKNKKYQPVK---EEPDLDDDDDDEDD 265
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 32.7 bits (71), Expect = 0.20
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 197 DNEFNPGRGRKANKEQQIYGVWAKDSDDD-ENEDNVRQRIRKPKDFSAPIGFVAGGVQQA 373
D NP RK K+Q+ V + DDD ++ED+ P++ S Q
Sbjct: 182 DQILNPRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDVEAPAPQEPSRK----QKAHNQR 237
Query: 374 GKKKDKTKEIKPAEASTSAPKYSDSSDEEPE 466
+KKDK K+ +P + P D D+E +
Sbjct: 238 EEKKDKNKKYQPVK---EEPDLDDDDDDEDD 265
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 32.7 bits (71), Expect = 0.20
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +2
Query: 140 NSKMSDDEVIKF-EITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSD--DDENEDNVRQR 310
NS MS++ ++F E D+D D++ R +K + G A ++ D ++D V +
Sbjct: 1339 NSDMSEESDVEFDEGIDFDSDDD-GVEREDVVSKPKPRTGKGAAKAEVIDLSDDDEVPAK 1397
Query: 311 IRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTA 490
P +AP + +G D+ E KP+ + +PK + EP+ +D
Sbjct: 1398 KPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPKKAAPKTAEPKSKAVTDFF 1457
Query: 491 GIRRQ 505
G ++
Sbjct: 1458 GASKK 1462
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 32.7 bits (71), Expect = 0.20
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +2
Query: 140 NSKMSDDEVIKF-EITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSD--DDENEDNVRQR 310
NS MS++ ++F E D+D D++ R +K + G A ++ D ++D V +
Sbjct: 1339 NSDMSEESDVEFDEGIDFDSDDD-GVEREDVVSKPKPRTGKGAAKAEVIDLSDDDEVPAK 1397
Query: 311 IRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTA 490
P +AP + +G D+ E KP+ + +PK + EP+ +D
Sbjct: 1398 KPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPKKAAPKTAEPKSKAVTDFF 1457
Query: 491 GIRRQ 505
G ++
Sbjct: 1458 GASKK 1462
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.27
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 269 DSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAE-ASTSAPKYSD 445
D DDDENED+ ++ +K KD ++ KKKDK K E K D
Sbjct: 227 DKDDDENEDDKKKDKKKKKDDKEKDD--DDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKD 284
Query: 446 SSDEEPE 466
D+E E
Sbjct: 285 DDDDEDE 291
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTK---EIKPAEASTSAPK 436
KD DDDE+EDN ++ +K KD ++ KKKDK K + + K
Sbjct: 283 KDDDDDEDEDNKKKDKKKKKDDKDD---EDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKK 339
Query: 437 YSDSSDEEPE 466
D D+E E
Sbjct: 340 KDDKDDDEDE 349
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKK-DKTKEIKPAEASTSAPKYS 442
KD DDDE+E++ ++ +K KD + KKK DK K+ E K
Sbjct: 206 KDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDK 265
Query: 443 DSSDEEPE 466
+D++ E
Sbjct: 266 KKNDDDEE 273
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = +2
Query: 236 KEQQIYGVWAKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAE 415
KE++ KD +E+++ Q+ +K KD + KKKD E + +
Sbjct: 138 KEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEK 197
Query: 416 ASTSAPKYSDSSDEEPE 466
K D D+E E
Sbjct: 198 DKKKKDKKKDDDDDEDE 214
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSD 445
+D D D +D ++ +KP + GF+ GG+ Q KK K+K + S + +
Sbjct: 802 EDDDFDGEDDGSAEKKKKPNKLNELNGFL-GGIHQISKKYMKSKNLNLDPTSRKSERNGR 860
Query: 446 SSDEEPE 466
++ E E
Sbjct: 861 VNEREIE 867
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSD 445
+D D D +D ++ +KP + GF+ GG+ Q KK K+K + S + +
Sbjct: 802 EDDDFDGEDDGSAEKKKKPNKLNELNGFL-GGIHQISKKYMKSKNLNLDPTSRKSERNGR 860
Query: 446 SSDEEPE 466
++ E E
Sbjct: 861 VNEREIE 867
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 377 KKKDKTKEIKPAEASTSAPKYSD---SSDEEPEVPXASDTAGIRRQGQGMRPPSLGGNVG 547
+KK + + K AEASTS P+ S SS E+PE +S +++ + P S +
Sbjct: 214 QKKPRGGKKKEAEASTSVPQASSPDISSQEQPESSTSSSKKPSKKEKEPSDPMST-FVLD 272
Query: 548 NWEK 559
NW+K
Sbjct: 273 NWKK 276
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 200 NEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGK 379
NE P +K ++ G + S D + ++ + P+ GG +QA
Sbjct: 261 NERVPKMKTNISKTRKKKGKVSDASKDSRPSETKKETLMMPEIHHTKHFDSIGGEEQAFA 320
Query: 380 KKDKTKEIKPAEA 418
KK+K +E KP EA
Sbjct: 321 KKEKVEEFKPTEA 333
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRKPKDFS-APIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYS 442
KD E ED+V RKP + S + V Q GK+ K+K KP + S+ S
Sbjct: 26 KDKKTFEEEDDVENVKRKPAESSDDEVVVVVVKKDQKGKRGKKSK--KPKKKQESSDDSS 83
Query: 443 DSSD 454
D+SD
Sbjct: 84 DNSD 87
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 143 SKMSDDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKD-------SDDDENEDNV 301
++ SDDEV+ + D + G+ K K++Q + D SDDD+
Sbjct: 45 AESSDDEVV---VVVVKKDQKGKRGKKSKKPKKKQESSDDSSDNSDSSESSDDDKKSKKK 101
Query: 302 RQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPE 466
+++ +K S+ + KKK K + ++ S+ + SDSSD +
Sbjct: 102 KKKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSKKDSSDDSSDSSDSSDSSDSSDD 156
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 152 SDDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWA--KDSDDDENEDNVRQRIRKPK 325
SDD + ++ D++ + + +K+ K+ + DS DD + ++ +
Sbjct: 79 SDDSSDNSDSSESSDDDKKSKKKKKKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSKKDSS 138
Query: 326 DFSAPIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPE 466
D S+ + + K K K+ K ++ S+ SDSSD+ +
Sbjct: 139 DDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSD 185
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 374 GKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQ 505
GK + KT + KP + S + + SSD+EP P + +RR+
Sbjct: 596 GKPRRKTDD-KPKKVSIAPVSTNKSSDDEPSTPRRRSSIDMRRE 638
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 374 GKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQ 505
GK + KT + KP + S + + SSD+EP P + +RR+
Sbjct: 596 GKPRRKTDD-KPKKVSIAPVSTNKSSDDEPSTPRRRSSIDMRRE 638
>U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical
protein F10E7.8 protein.
Length = 929
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 284 ENEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIKPA-EASTSAPKYSDSSDEE 460
+++++VR + F+ G +A + KD+ + + E ST A K DS
Sbjct: 363 KDQEHVRNMAHRAGSFARG-GMMARQMAYNDDSKDEDAYSEASSEDSTIASKKEDSPGAS 421
Query: 461 PEVPXA-SDTAGIRRQGQGMRPPSLGGNV 544
P + DTA RQG G + P +G V
Sbjct: 422 SSTPPSIPDTASNFRQGSGEQTPRVGSPV 450
>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
protein Y46E12BL.2 protein.
Length = 1334
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Frame = +2
Query: 185 DYDXDNEFNPGRGRKANKE-QQIYGVWAKDSDDDENEDNVRQRIRK--PKDFSAPIGFVA 355
D D D+E P +G+K KE D DDD++E + + + + P I
Sbjct: 1208 DDDEDDEDGPTKGKKRVKENSDSEDEILSDDDDDDDEKDAKTFVSRAAPSYGGKGIYRDT 1267
Query: 356 GGVQQAG-----KKKDKTKEIKPAEASTSAPKYS 442
G Q G K++ K K KP + S Y+
Sbjct: 1268 SGKSQVGSSVGAKRQQKQKPNKPKQQQKSVQPYA 1301
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRK 319
KD DDD+N+D+V +RK
Sbjct: 938 KDDDDDDNDDDVDDEVRK 955
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRK 319
KD DDD+N+D+V +RK
Sbjct: 936 KDDDDDDNDDDVDDEVRK 953
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRK 319
KD DDD+N+D+V +RK
Sbjct: 938 KDDDDDDNDDDVDDEVRK 955
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 266 KDSDDDENEDNVRQRIRK 319
KD DDD+N+D+V +RK
Sbjct: 936 KDDDDDDNDDDVDDEVRK 953
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 413 EASTSAPKYSDSSDEEPEVPXASDTAGIRRQG 508
E ST AP+++ +++ P+ P S G+RR G
Sbjct: 389 EESTYAPRHNVVAEQVPQQPVNSAPGGVRRAG 420
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 413 EASTSAPKYSDSSDEEPEVPXASDTAGIRRQG 508
E ST AP+++ +++ P+ P S G+RR G
Sbjct: 335 EESTYAPRHNVVAEQVPQQPVNSAPGGVRRAG 366
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 356 GGVQQAGKKKDKTKEIKPAEA 418
GG +QA KK+K +E KP EA
Sbjct: 33 GGEEQAFAKKEKVEEFKPTEA 53
>Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical
protein R04D3.3 protein.
Length = 430
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 185 DYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQRIRKPK 325
DY+ DN F P RK N+ +I D+DE++ QR RK K
Sbjct: 345 DYEEDNSFKP---RKTNRRSRI-------DDEDESKPRKTQRGRKNK 381
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 28.3 bits (60), Expect = 4.4
Identities = 29/139 (20%), Positives = 57/139 (41%)
Frame = +2
Query: 155 DDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNVRQRIRKPKDFS 334
++E + E D D DN+ + + E + +++DDE + V++ ++ ++
Sbjct: 38 EEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEENEEVKEE-KEDEEVV 96
Query: 335 APIGFVAGGVQQAGKKKDKTKEIKPAEASTSAPKYSDSSDEEPEVPXASDTAGIRRQGQG 514
V +A ++D E + S AP S D+ + P +SD A R+
Sbjct: 97 EERVKVEEPRPRAVAERDDASEGDASLGSLRAP----SDDQGEQSPWSSDVAEEGRRSPT 152
Query: 515 MRPPSLGGNVGNWEKHTKG 571
S ++G+W G
Sbjct: 153 WSDRSWYTDLGSWNAMMAG 171
>AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical
protein Y81B9A.1 protein.
Length = 579
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 263 AKDSDDDENEDNVRQRIRKPKDFSAPIGFV 352
+ DS+D+ +EDN Q R+P++ AP+ +
Sbjct: 223 SSDSEDESDEDNAPQ--RQPEEVPAPLNII 250
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +2
Query: 137 ANSKMSDDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNV--RQR 310
A++K D + + +D + N R RK E + G D DDD+ ++NV ++
Sbjct: 9 ASNKEEDTTLSDDDGSDVEIKNS-KKDRKRKLASESEKSGSDDDDDDDDDEDENVTSKKS 67
Query: 311 IRKPKDFSAPIG--FVAGGVQQAGKKKD 388
++ + AP G F+A V+ + +D
Sbjct: 68 KKQKRKNKAPSGRDFLAWDVEVDDEDED 95
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +2
Query: 137 ANSKMSDDEVIKFEITDYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENEDNV--RQR 310
A++K D + + +D + N R RK E + G D DDD+ ++NV ++
Sbjct: 9 ASNKEEDTTLSDDDGSDVEIKNS-KKDRKRKLASESEKSGSDDDDDDDDDEDENVTSKKS 67
Query: 311 IRKPKDFSAPIG--FVAGGVQQAGKKKD 388
++ + AP G F+A V+ + +D
Sbjct: 68 KKQKRKNKAPSGRDFLAWDVEVDDEDED 95
>Z35637-5|CAE17723.1| 185|Caenorhabditis elegans Hypothetical
protein C03C10.7 protein.
Length = 185
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 287 NEDNVRQRIRKPKDFSAPIGFVAGGVQQAGKKKDKTKEIK 406
+ED++R +RKPK P + +++ ++ +K +E K
Sbjct: 12 SEDDLRPHLRKPKPLKPPKPQQSSEIEELIRRNEKREEAK 51
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 23.4 bits (48), Expect(2) = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 185 DYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENED 295
D + DNE G+ R+ + E D DDD++E+
Sbjct: 1672 DTNEDNEERNGQPREFDGESSSSDDDNDDDDDDDDEE 1708
Score = 21.8 bits (44), Expect(2) = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 269 DSDDDENEDNVRQRIRKPKD 328
D DDD++ED+ R + +D
Sbjct: 1713 DDDDDDDEDSDRPAEERQED 1732
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 23.4 bits (48), Expect(2) = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 185 DYDXDNEFNPGRGRKANKEQQIYGVWAKDSDDDENED 295
D + DNE G+ R+ + E D DDD++E+
Sbjct: 1672 DTNEDNEERNGQPREFDGESSSSDDDNDDDDDDDDEE 1708
Score = 21.8 bits (44), Expect(2) = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 269 DSDDDENEDNVRQRIRKPKD 328
D DDD++ED+ R + +D
Sbjct: 1713 DDDDDDDEDSDRPAEERQED 1732
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,714,736
Number of Sequences: 27780
Number of extensions: 215041
Number of successful extensions: 1130
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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