Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F16
         (885 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   6.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.5  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.5  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 409 CLKATLYCTRRRLHAAVYS 353
           C  AT YC   +LH   YS
Sbjct: 50  CTYATKYCHSLKLHLRKYS 68


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = -3

Query: 586 LSIRVINNETISAMYLLVFPLSSLMRFGLFSLIRSKAAGQSNLYLATKASILGNSSACTC 407
           L + + +  T ++  L  FP  +++      LIR +  G         A  +G  S CT 
Sbjct: 159 LRVALTSELTAASTVLGFFPALNIVADSFIELIRRQRVGYKVTGFEELAYKMGLESTCTL 218

Query: 406 L 404
           +
Sbjct: 219 I 219


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 202 KIHVRNCMKRLNCTKMRVN 258
           KI  R C K   C+ +R+N
Sbjct: 49  KIQYRPCTKNQQCSILRIN 67


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 202 KIHVRNCMKRLNCTKMRVN 258
           KI  R C K   C+ +R+N
Sbjct: 98  KIQYRPCTKNQQCSILRIN 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,058
Number of Sequences: 438
Number of extensions: 4888
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)