Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F14
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 126 4e-29
AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 126 4e-29
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 35 0.12
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 35 0.12
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 35 0.12
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 35 0.12
AE014297-173|AAF52078.2| 246|Drosophila melanogaster CG14661-PA... 30 4.4
AE014298-906|AAO41633.1| 333|Drosophila melanogaster CG3960-PD,... 29 5.8
>AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p
protein.
Length = 163
Score = 126 bits (304), Expect = 4e-29
Identities = 69/140 (49%), Positives = 90/140 (64%)
Frame = +3
Query: 297 IGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHMQDVLLQA 476
IG+ IK+ L RA E R+ +GL AI LSK+ G+LFCL A+ GDSATHM +VLL+A
Sbjct: 31 IGRTIKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEA 90
Query: 477 FCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHYPYTDPFTDSQEIDLSTLSEAERQ 656
FC ENDI+VIKVD TKL R+LG S SC LV + D + L++AE Q
Sbjct: 91 FCYENDIYVIKVDDATKLSRILGQDSVE--SCCLVQKVWADAPEEQ-------LTKAENQ 141
Query: 657 LIDHCESDWGYSQMPVIKLP 716
L+D+CE+ W Q P+++LP
Sbjct: 142 LVDYCEAHWDAPQQPIVQLP 161
>AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA
protein.
Length = 163
Score = 126 bits (304), Expect = 4e-29
Identities = 69/140 (49%), Positives = 90/140 (64%)
Frame = +3
Query: 297 IGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHMQDVLLQA 476
IG+ IK+ L RA E R+ +GL AI LSK+ G+LFCL A+ GDSATHM +VLL+A
Sbjct: 31 IGRTIKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEA 90
Query: 477 FCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHYPYTDPFTDSQEIDLSTLSEAERQ 656
FC ENDI+VIKVD TKL R+LG S SC LV + D + L++AE Q
Sbjct: 91 FCYENDIYVIKVDDATKLSRILGQDSVE--SCCLVQKVWADAPEEQ-------LTKAENQ 141
Query: 657 LIDHCESDWGYSQMPVIKLP 716
L+D+CE+ W Q P+++LP
Sbjct: 142 LVDYCEAHWDAPQQPIVQLP 161
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 276 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 455
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 26 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 81
Query: 456 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 551
+ L+ A C E+ I +I+VD KL G C
Sbjct: 82 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 111
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 276 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 455
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 14 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 69
Query: 456 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 551
+ L+ A C E+ I +I+VD KL G C
Sbjct: 70 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 276 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 455
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 14 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 69
Query: 456 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 551
+ L+ A C E+ I +I+VD KL G C
Sbjct: 70 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 276 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 455
V+ I ++ VL+++ + L G+ A + L K A+ C+ AE+ D +
Sbjct: 14 VLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FDEPNYK 69
Query: 456 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 551
+ L+ A C E+ I +I+VD KL G C
Sbjct: 70 K--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99
>AE014297-173|AAF52078.2| 246|Drosophila melanogaster CG14661-PA
protein.
Length = 246
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 66 CVTSSNYXREV*VCLHNRRILCKVL---VHSVKIHIRISLRSLEISEIQELRSIRLSKMY 236
C+++ N + VC N L K L VH+++ ++ ++ L + ++ L LS +
Sbjct: 17 CISAGNMPDYIQVCHRNDPELSKCLKSSVHNLRPYLAKGIKELNVPPLEPLYIGDLSILD 76
Query: 237 KEAVVPVKAETFSVIAAKS 293
A + VKA+ +++ A +
Sbjct: 77 GSAGLTVKAKKLNILGASN 95
>AE014298-906|AAO41633.1| 333|Drosophila melanogaster CG3960-PD,
isoform D protein.
Length = 333
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 556 PWTSVACWSTIRIQIHSQTVKK*IYQHYLKPRDS*STTANQTGAIHKCPSSSCP 717
P++S A S I+ ++ Q I Y K +S STT N + +K SSS P
Sbjct: 30 PFSSAALRSVIKHRLLLQVKTTRITNTYSKSGNSTSTTNNTSNTTNKVSSSSAP 83
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,531,999
Number of Sequences: 53049
Number of extensions: 746689
Number of successful extensions: 1627
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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