Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F13
(773 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 87 1e-17
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 72 6e-13
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 70 2e-12
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 46 4e-05
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 40 0.002
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 36 0.028
SB_6422| Best HMM Match : Gemini_AC4_5 (HMM E-Value=6.7) 33 0.26
SB_39227| Best HMM Match : DRMBL (HMM E-Value=0.76) 29 3.2
SB_46667| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24) 29 5.5
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 87.0 bits (206), Expect = 1e-17
Identities = 49/140 (35%), Positives = 77/140 (55%)
Frame = +2
Query: 197 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 376
+I A + A ++++ GP GM+KM+++ + VT+D TI+ ++V+H AKLMV S+
Sbjct: 35 HILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELSK 94
Query: 377 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEI 556
QD E+GDGT V+VL+G G+ IADGYE A LE + S+ N
Sbjct: 95 SQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIADNFP 154
Query: 557 KDTKNIKEVTKGIVAAIMSK 616
D N + + + + + SK
Sbjct: 155 VDKDNKESLIQTAMTTLGSK 174
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/88 (40%), Positives = 57/88 (64%)
Frame = +2
Query: 128 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 307
PG+ +LK+G G+ + + NI+AC+ A +VR+ GP GM+K+I++ K +++D
Sbjct: 639 PGII-LLKEGTDASQGIPQLI-SNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISND 696
Query: 308 AGTIIRELDVEHPAAKLMVLASQMQDAE 391
TII LD+ HPAAK +V ++ QDAE
Sbjct: 697 GATIINLLDIVHPAAKTLVDIAKSQDAE 724
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 69.7 bits (163), Expect = 2e-12
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Frame = +2
Query: 230 VRSAYGPNGMNKMI--INHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDG 403
V+S GP GM+K++ VT+D TI++ + +++PAAK++V S++QD EVGDG
Sbjct: 36 VKSTLGPKGMDKILQSFGQNGNIQVTNDGATILKSIGIDNPAAKILVELSKVQDDEVGDG 95
Query: 404 TNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEV 583
T V VL+ + I G+ +++ + L + + D + +E
Sbjct: 96 TTSVTVLTSELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALEAAAVDHSSDPEKFRED 155
Query: 584 TKGIVAAIMSKQ--YGHEQFISELVTKACVAILPEKTTFNVDNVRVCKILXAGLLQSEVL 757
I +S + H ++L A A+L K + +++ +++ K L G++ S +
Sbjct: 156 LMNIARTTLSSKILVQHRDHFAKL---AVDAVLRLKGSGDLNAIQIIKKLGGGMVDSFLD 212
Query: 758 SGMV 769
G +
Sbjct: 213 EGFL 216
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 545 CNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVDNVRVCKI 724
C+++ + ++ KEVTK I A+ SKQ + + + + V+ILPEK TFNVDNVRV KI
Sbjct: 3 CSKLTNIRDEKEVTKAIKTAVSSKQIRSIKNDNNMRFSS-VSILPEKATFNVDNVRVAKI 61
Query: 725 LXAGLLQSEVLSGMVF 772
L +G+ SEV+ GMVF
Sbjct: 62 LGSGIHNSEVVQGMVF 77
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +2
Query: 296 VTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVT 475
+T+D I+RE+ V+HPAAK M+ S+ QD EVGDGT VI+L+G +
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 476 TSEIADGYERALDKCLEILPSLICNEIK 559
++I Y A+D ++IL I E++
Sbjct: 61 PTQIIAAYRLAMDDMIDILKQQIREELQ 88
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +2
Query: 326 ELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYER 505
++ V+HPAAK M+ S+ QD EVGDGT VI+L+G + ++I Y
Sbjct: 208 KIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRL 267
Query: 506 ALDKCLEILPSLICNEIK 559
A+D ++IL I E++
Sbjct: 268 AMDDMIDILKQQIREELQ 285
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 45.6 bits (103), Expect = 4e-05
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +2
Query: 200 INACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQM 379
+ C+ F + ++ ++GPNG++ M+ + +T+ I+ L + +P +++V A++
Sbjct: 6 LQTCQNFERILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARS 65
Query: 380 QDAEVGDGTNFVIVL 424
G G ++ I++
Sbjct: 66 LSGRTGSGASYFIII 80
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/135 (21%), Positives = 57/135 (42%)
Frame = +2
Query: 320 IRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGY 499
++ ++HP A L+ + QD GDGT +++ G G+ + +G+
Sbjct: 166 VQNSQIQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGF 225
Query: 500 ERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILP 679
E A K LE+L + + D + V K + + + ++E+V A + I
Sbjct: 226 EVAKKKALEVLEEVKVSREMDRDTLINVAKTSLRTKVRTELA--DLLTEVVVDAVLTIRK 283
Query: 680 EKTTFNVDNVRVCKI 724
K ++ V V ++
Sbjct: 284 PKKPIDLHMVEVMEM 298
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 179 EEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTI--IRELDVE-HPA 349
+E NI A K A ++R++ GP GM+KMI +T+D TI I +D+E P
Sbjct: 23 QEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATIKLIDTVDLEGGPV 82
Query: 350 AKLMVLASQMQDAEVGD 400
K +V A+ M G+
Sbjct: 83 GKPVVPAALMNRPTRGE 99
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 36.3 bits (80), Expect = 0.028
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = +2
Query: 371 SQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICN 550
S++QD EVGDGT V VL+ + I G+ +++ + L + +
Sbjct: 3 SKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALEAAAVD 62
Query: 551 EIKDTKNIKEVTKGIVAAIMSKQ--YGHEQFISELVTKACVAILPEKTTFNVDNVRVCKI 724
D + ++ I +S + H ++L A A+L K + +++ +++ K
Sbjct: 63 HSSDPEKFRDDLMNIARTTLSSKILVQHRDHFAKL---AVDAVLRLKGSGDLNAIQIIKK 119
Query: 725 LXAGLLQS 748
L G++ S
Sbjct: 120 LGGGMVDS 127
>SB_6422| Best HMM Match : Gemini_AC4_5 (HMM E-Value=6.7)
Length = 442
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/90 (24%), Positives = 42/90 (46%)
Frame = +2
Query: 494 GYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAI 673
G E +D CL+ + L+ ++ D + V G+V +S+ Y Q+ + KA + +
Sbjct: 153 GLEMEVDVCLDKVKHLVPTQLYDKRPSYLVYAGLVFVALSQPYMQHQYGKDWARKAPIRL 212
Query: 674 LPEKTTFNVDNVRVCKILXAGLLQSEVLSG 763
++N IL + +L SE+ +G
Sbjct: 213 CDRALYGILENPDQEVILLSQVLASELTTG 242
>SB_39227| Best HMM Match : DRMBL (HMM E-Value=0.76)
Length = 600
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 518 CLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFN 697
CL + + ++D + ++ + G+VAA + QYG + +S+ VA+ +K +
Sbjct: 288 CLSTVKVTNLSSVQDVTSHEKPSSGVVAAETAPQYG-DLLMSDREDNRSVAVKTDKGNYR 346
Query: 698 VDNVRVCKI 724
++ R+ +
Sbjct: 347 EESKRILSV 355
>SB_46667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 587 KGIVAAIMSKQYGHEQFISELVTKACVAILPEK 685
+G A S ++GHEQ + +L+ K LP+K
Sbjct: 87 EGYSALAWSAKHGHEQIVQKLIAKGAYYNLPDK 119
>SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)
Length = 465
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 191 YRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDA-GTIIRELDVEHPAAKL 358
+R+IN + A+ + Y PN ++ + H D +FV G++ + D +A +
Sbjct: 387 FRSINWQQLVARGIEPPYNPNVSGQLDLKHFDPEFVREPVPGSVGKSADSNFVSASV 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,952,236
Number of Sequences: 59808
Number of extensions: 410588
Number of successful extensions: 885
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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