Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F11
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.82 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 207 SCTACLTATKHC*TLKCGLNQLLNVP 130
           SC  C  ATK+C +LK  L +  + P
Sbjct: 288 SCRDCSYATKYCHSLKIHLRRYGHTP 313


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 207 SCTACLTATKHC*TLKCGLNQ 145
           SC  C  ATK+C +LK  L +
Sbjct: 46  SCRDCSYATKYCHSLKIHLRR 66


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 583 LAYGSAGAPPKIPKSATLTFH 645
           LAYG AGA  +  K A + F+
Sbjct: 300 LAYGCAGATSEAEKIAKICFY 320


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 329  VQLQRNYKLALRKDLRTVPSRAA--KEIFCICTTLAL*MTVQNLIVQFL 469
            +QL++      +K  R V +R      IF I T  +  +T+ N+I QFL
Sbjct: 1195 IQLKQVVNYKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFL 1243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,580
Number of Sequences: 336
Number of extensions: 2900
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)