Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F06
         (589 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0154 + 5967512-5967658,5968206-5968652,5968766-5968846,596...   115   3e-26
01_05_0085 - 17995800-17995985,17996724-17996823,17996919-179971...   111   4e-25
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718     31   0.68 
07_03_0755 - 21261855-21261945,21262277-21262323,21262819-212630...    30   1.2  
11_06_0066 - 19741883-19742263,19743001-19743231,19743378-197435...    29   2.1  
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874...    28   4.8  
09_04_0469 + 17864265-17864789,17865648-17865854,17865936-178661...    28   6.3  
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680...    27   8.4  

>03_02_0154 +
           5967512-5967658,5968206-5968652,5968766-5968846,
           5969058-5969075,5969552-5969748,5969844-5969943,
           5970676-5970861
          Length = 391

 Score =  115 bits (276), Expect = 3e-26
 Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
 Frame = +3

Query: 39  FXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNNFLTT 218
           F   ++ + P LA  +A L +LY +KLWHQLTLKL  F++ PA Q GD LIQLYNNF+T 
Sbjct: 5   FVESQREARPELADPYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTLIQLYNNFITD 64

Query: 219 FESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMN-----DEALALCKVLQGQI 383
           FE+KI  L L         QY +   A++ LE V TK++       +E +   K+    I
Sbjct: 65  FETKINLLKLAHFAVIASRQYPDKDAAISFLEGVITKLRETKDLRINEPILYVKMQIAAI 124

Query: 384 YIEQLNDYDAAEKIIEHLXSTLEXADGVTP-VHGRFYKLASEYYRXRGPTGRHYRXPLRY 560
            +E+ N  +  +K+++   STL+    V P VH   Y ++S+Y++ R      Y+  L Y
Sbjct: 125 NLEKGNQKE-CKKLLDEGKSTLDSMTDVDPTVHASLYWISSQYHKARQEFAEFYKNALLY 183

Query: 561 V 563
           +
Sbjct: 184 L 184


>01_05_0085 -
           17995800-17995985,17996724-17996823,17996919-17997115,
           17997836-17997916,17998046-17998492,17998774-17998920
          Length = 385

 Score =  111 bits (267), Expect = 4e-25
 Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 6/177 (3%)
 Frame = +3

Query: 51  KQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNNFLTTFESK 230
           ++ + P LA  +A L +LY +KLWHQLTLKL  F++ PA Q GD +IQLYNNF++ FE+K
Sbjct: 9   QRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNFISDFETK 68

Query: 231 IXPLSLVEIIAHIVEQYVNXRDAVTXLEKV-----ETKVKMNDEALALCKVLQGQIYIEQ 395
           I  L L         QY +   A++ LE V     ET+ +  DE +   K+    I +E+
Sbjct: 69  INLLKLAHFAVIASRQYPDKDAAISFLEGVTAKLRETRERRIDEPVLYVKMQIAAINLEK 128

Query: 396 LNDYDAAEKIIEHLXSTLEXADGVTP-VHGRFYKLASEYYRXRGPTGRHYRXPLRYV 563
             D    +K+++   STL+    V P VH  FY ++S+Y++        Y+  L Y+
Sbjct: 129 -GDQKECKKLLDEGKSTLDSMTDVDPTVHASFYWISSQYHKACQEFAEFYKNALLYL 184


>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
          Length = 1412

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +3

Query: 267  IVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHLXST 446
            + E  V     VT  E V+  + ++D+ +   K +Q  +  E   +  AAE+ +EH  +T
Sbjct: 1338 VQEPMVEDEKTVTTEETVQDPMVVDDKTMTTEKTVQDSMVEEGGTNIAAAEETVEHAAAT 1397

Query: 447  LEXADG 464
             E   G
Sbjct: 1398 AEALAG 1403


>07_03_0755 -
           21261855-21261945,21262277-21262323,21262819-21263014,
           21263239-21263340,21263602-21263678,21264037-21264236,
           21264324-21264681,21265245-21265301,21265434-21266192,
           21266287-21266468,21266651-21266813
          Length = 743

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/73 (26%), Positives = 36/73 (49%)
 Frame = +3

Query: 84  WAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNNFLTTFESKIXPLSLVEIIA 263
           + ++  +  K+ W    LK  + V    L+R   +++L    + T  SKI PL+L + ++
Sbjct: 377 YERIAIMEKKQAWSNKELKYLQGVNERLLKR---VVELKGT-VKTLNSKIDPLTLDDSLS 432

Query: 264 HIVEQYVNXRDAV 302
             VEQ +   D +
Sbjct: 433 QFVEQCLGSEDVI 445


>11_06_0066 -
           19741883-19742263,19743001-19743231,19743378-19743530,
           19743667-19743726,19743806-19743874,19744639-19744719,
           19744818-19744920,19745392-19745534,19745621-19745683,
           19745803-19745870,19745974-19746055,19746147-19746260,
           19746362-19746570,19746647-19746818
          Length = 642

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 25/97 (25%), Positives = 45/97 (46%)
 Frame = +3

Query: 9   VKFAVIDVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXL 188
           +  AV DV  F T ++ S+       + + E+YN+++   LTL  ++   + +L+RG  +
Sbjct: 114 IPLAVRDV--FDTAREVSDREFLIRVSYM-EIYNEEINDLLTLGSEKLPIHESLERGVYV 170

Query: 189 IQLYNNFLTTFESKIXPLSLVEIIAHIVEQYVNXRDA 299
             L    + + E     L L E   H  E  +N R +
Sbjct: 171 SGLREEIVNSAEQVFKLLELGEANRHFGETNMNVRSS 207


>07_03_0561 +
           19485218-19485242,19485323-19486467,19487354-19487476,
           19487553-19487626,19487886-19487946,19488285-19488370,
           19488795-19488864,19489026-19489122,19489342-19489481,
           19490225-19490308,19490313-19490346,19491833-19491951
          Length = 685

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 120 WHQLTLKLQEFVKNPALQRGDXLIQLYNNFLTTFESKIXPLSLVEIIAHIVEQYVNXRDA 299
           W+++TL+   F KN      +    LY    T F+S +   +L+   AHI +     R A
Sbjct: 474 WNKVTLRRDSFDKNEM----EFYEALYTQSRTQFDSYVDAGTLMNNYAHIFDLLTRLRQA 529

Query: 300 V 302
           V
Sbjct: 530 V 530


>09_04_0469 +
           17864265-17864789,17865648-17865854,17865936-17866175,
           17866705-17866771,17866872-17867015,17867202-17867297,
           17867818-17867975,17868054-17868190,17868551-17868752
          Length = 591

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 108 NKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNNFLTTFESKIXPLS 245
           N K W Q+  +L  F+K     +G   ++ Y+N   +F S + P++
Sbjct: 178 NFKEWKQVLQELGRFLKADGAYKGSRSLR-YDNLFDSFPSNLAPIA 222


>12_01_0752 -
           6798938-6799312,6799628-6799768,6800257-6800325,
           6800407-6800454,6801740-6801836,6801922-6802001,
           6802099-6802170,6802335-6802429,6802853-6802934,
           6805476-6805853
          Length = 478

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 465 HHQHXRVYFXNVQLFSRLHHNHSA 394
           +HQH   +F N    +  HHNH A
Sbjct: 382 YHQHNNNHFNNQNYHNGQHHNHHA 405


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,918,289
Number of Sequences: 37544
Number of extensions: 245806
Number of successful extensions: 528
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)