Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F06
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome, ma... 174 2e-43
BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome, ma... 174 2e-43
BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome, ma... 174 2e-43
AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit ... 174 2e-43
AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit ... 174 2e-43
AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit ... 173 5e-43
AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPa... 171 2e-42
>BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 174 bits (423), Expect = 2e-43
Identities = 83/183 (45%), Positives = 115/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q+S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ LR++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
>BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 174 bits (423), Expect = 2e-43
Identities = 83/183 (45%), Positives = 115/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q+S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ LR++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
>BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 174 bits (423), Expect = 2e-43
Identities = 83/183 (45%), Positives = 115/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q+S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ LR++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
>AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 174 bits (423), Expect = 2e-43
Identities = 83/183 (45%), Positives = 115/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q+S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ LR++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
>AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit 11
protein.
Length = 376
Score = 174 bits (423), Expect = 2e-43
Identities = 83/183 (45%), Positives = 115/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q+S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ LR++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
>AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 173 bits (420), Expect = 5e-43
Identities = 83/183 (45%), Positives = 114/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ LR++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
>AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPase
subunit 13 isoform 1 variant protein.
Length = 376
Score = 171 bits (416), Expect = 2e-42
Identities = 82/183 (44%), Positives = 114/183 (62%)
Frame = +3
Query: 27 DVSDFXTKKQASEPALAADWAKLXELYNKKLWHQLTLKLQEFVKNPALQRGDXLIQLYNN 206
DV F + Q S P A W +L ELY KKLWHQLTL++ +FV++P +GD LI+LY N
Sbjct: 3 DVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYEN 62
Query: 207 FLTTFESKIXPLSLVEIIAHIVEQYVNXRDAVTXLEKVETKVKMNDEALALCKVLQGQIY 386
F++ FE ++ PLSLVEII H+V Q + A+T LEK KVK +DEA+ LCK G +
Sbjct: 63 FISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALK 122
Query: 387 IEQLNDYDAAEKIIEHLXSTLEXADGVTPVHGRFYKLASEYYRXRGPTGRHYRXPLRYVG 566
+ + D ++ IE + L GVT VH RFY L+S+YY+ G +Y+ L+++G
Sbjct: 123 L-NIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALQFLG 181
Query: 567 CAD 575
C D
Sbjct: 182 CVD 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,552,339
Number of Sequences: 237096
Number of extensions: 1387453
Number of successful extensions: 2320
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2313
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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