Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_F04
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065) 35 0.047
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 31 1.0
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_2557| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.3
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_36510| Best HMM Match : TPR_3 (HMM E-Value=4.3) 30 1.3
SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092) 30 1.8
SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45) 29 2.3
SB_57583| Best HMM Match : DUF572 (HMM E-Value=2.1) 29 3.1
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 29 3.1
SB_13975| Best HMM Match : SGS (HMM E-Value=3.4) 29 3.1
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 29 3.1
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33) 28 5.4
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_23812| Best HMM Match : Filament (HMM E-Value=0.05) 28 7.1
SB_36688| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20598| Best HMM Match : Herpes_UL49_2 (HMM E-Value=6.4) 27 9.4
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 27 9.4
SB_375| Best HMM Match : GalP_UDP_transf (HMM E-Value=3.2) 27 9.4
SB_57437| Best HMM Match : GalP_UDP_transf (HMM E-Value=5.7) 27 9.4
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_42304| Best HMM Match : NHL (HMM E-Value=0) 27 9.4
SB_39048| Best HMM Match : RVT_1 (HMM E-Value=1.9e-23) 27 9.4
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065)
Length = 1171
Score = 35.1 bits (77), Expect = 0.047
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 103 AVLGMNFELEESLLTQSGPVSERMEKWTEAQRKGQKIDI-DVYGKPSEKQLRELEHVRSL 279
AVL NF+L ES L + G V E +E + E + + I + + G P + LR H L
Sbjct: 253 AVLDKNFKLAESYLLEQGHVDEAIEMYQELHKWDEAIAVAEATGHPELENLRS-NHYHWL 311
Query: 280 SKELQD 297
S+ Q+
Sbjct: 312 SETGQE 317
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/90 (22%), Positives = 40/90 (44%)
Frame = +1
Query: 46 YAVKIN*IRTLYFVQVQTRAVLGMNFELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDV 225
Y K N + L +Q + G++ E +E ++ ++ + + K + +
Sbjct: 1848 YEFKCNEVEVLQDCLLQLKGTTGVDDESDEPASEEAEEKTKEEKLKSMLDSSKLKTEAKI 1907
Query: 226 YGKPSEKQLRELEHVRSLSKELQDNLHELE 315
+ +E+ +LE +L +ELQD LH E
Sbjct: 1908 LREETERLKAQLEETMNLKEELQDKLHTAE 1937
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Frame = +1
Query: 70 RTLYFVQVQTRAVLGMNFELEE--SLLTQSGPVSERMEKWT-EAQRKGQKIDIDVYGKPS 240
R++ V + + + E+ + S++ Q +ERMEK E ++K Q+++ ++ K S
Sbjct: 1210 RSMEMVSAKAERIKKLEAEVADLQSMVEQDRQRAERMEKLALEHEKKVQQLETELQSKSS 1269
Query: 241 ------EKQLRELEHVRSLSKELQDNLHELETAVRIADVENQ 348
E ++E+E +R ++ Q L +L A + + EN+
Sbjct: 1270 GQGGANEAIIKEMEQLRQEQQDYQHKLDKLTHAEQELEEENK 1311
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 388 DHEFVSAN-RLNNCYGDEDLVDAKEEEKRRLTKDGRISLKASRVIEKVVL**RSVKSEDF 564
DH + A + NCY + + + + L K R S + R++EK L + K +D+
Sbjct: 101 DHTYTKAYLKRANCYMESEKYEEAVRDYESLCKKDRSSREFRRLLEKAKLELKKSKRKDY 160
Query: 565 FLIFLLSE 588
+ I +S+
Sbjct: 161 YKILNISK 168
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 388 DHEFVSAN-RLNNCYGDEDLVDAKEEEKRRLTKDGRISLKASRVIEKVVL**RSVKSEDF 564
DH + A + NCY + + + + L K R S + R++EK L + K +D+
Sbjct: 101 DHTYTKAYLKRANCYMESEKYEEAVRDYESLCKKDRSSREFRRLLEKAKLELKKSKRKDY 160
Query: 565 FLIFLLSE 588
+ I +S+
Sbjct: 161 YKILNISK 168
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/106 (19%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = +1
Query: 187 EAQRKGQKIDIDVYGKPSEKQLREL----EHVRSLSKELQDNLHELETAVRIADVENQAM 354
E ++ + + +G E++ REL + VRS +K+L+D + +LE ++ + +++
Sbjct: 255 EQEKTEKALQAARFGMDKERETRELGTQIDGVRSANKDLEDRIKDLEDELKRSFDKDEVF 314
Query: 355 NPTAPMLDYSEDHEFVSANRLNNCYGDEDLVDAKEEEKRRLTKDGR 492
+ A + D +++ +++ G D + A ++E++ D +
Sbjct: 315 DRLADLQDDMDNNR----DQIRGALGPGDELAALKKERQDSAADDK 356
>SB_2557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 26.6 bits (56), Expect(2) = 1.3
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 124 ELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLRELEHVRSLSKELQDNL 303
E S T GP M+K E K Q ID+ ++ RE+E + ++EL+ L
Sbjct: 13 EESSSSSTSKGPTKSSMDKMHERLEKSQDELIDL----QQRYQREIEKLEKDNRELRKQL 68
Score = 22.2 bits (45), Expect(2) = 1.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 283 KELQDNLHELETAVRIADVENQAMNP 360
KEL+D HE+E ++ + + Q ++P
Sbjct: 109 KELKDLRHEVELRMKRSVKQGQTVSP 134
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +1
Query: 127 LEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLRELEHVRSLSKELQDNLH 306
+EES +SG + E EK E++ K K++ G ++K + LE KE + L
Sbjct: 1208 IEESRSEESGIIGEMEEKLKESKDKISKLE----GTLNDK-AKALEKAHLSLKEAETKLE 1262
Query: 307 ELET-AVRIADVENQAMNPTAPMLDYSED 390
E+ T V+ + N+ + +++ +D
Sbjct: 1263 EMSTNNVKAVEESNEKITSLKALINQKDD 1291
>SB_36510| Best HMM Match : TPR_3 (HMM E-Value=4.3)
Length = 57
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 103 AVLGMNFELEESLLTQSGPVSERMEKWTEAQRKGQKIDI 219
AVL NF+L ES L + G V E +E + E + + I +
Sbjct: 15 AVLDKNFKLAESYLLEQGHVDEAIEMYQELHKWDEAIAV 53
>SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092)
Length = 783
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 160 VSERMEKWTEAQRKGQKIDIDVYGKPSE-KQLRE-LEHVRSLSKELQDNLHELETAVRIA 333
+ E EK+++AQ Q ++ + YGK E + L+E L H ++ + ++ + +E
Sbjct: 314 IEELKEKYSKAQSNVQSLEEEKYGKDGELRMLKESLAHFQAEEAKKREQIRAME------ 367
Query: 334 DVENQAMNPTAPMLDYSEDHEFVSANRLNNCYGDEDLVDAKEEEKRRLTKD 486
D Q + L +H RL + ++++ A E+ K+ +K+
Sbjct: 368 DQRKQEQSEKEKELQKQVEH---LTTRLK--FQEQEIAQAMEQRKKHTSKN 413
>SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 232 KPSEK-QLRELEHVRSLSKELQDN----LHELETAVRIADVENQAMNPTAPMLDYSEDH 393
KP+E+ QLR+ ++ L KEL+D + E+ T V + N + T P+ EDH
Sbjct: 355 KPAERRQLRQ--EIKVLRKELRDREEKAMREILTGVEVVLATNTSAGDTGPLGLLKEDH 411
>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
Length = 671
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 115 MNFELEESLLTQSGPVSERMEKWTEAQRK--GQKIDIDVYGKPSEKQLRELEHVRSLSKE 288
+N E LLT+ E ++AQ + +++DI K + E+E + E
Sbjct: 465 LNVNALEKLLTKKDESGETERSGSKAQTRDMSKELDISEINKKFQSLCEEVEQLEFKMYE 524
Query: 289 LQDNLHELETAV 324
D++H+L+ ++
Sbjct: 525 FSDDIHKLKMSM 536
>SB_57583| Best HMM Match : DUF572 (HMM E-Value=2.1)
Length = 638
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 244 KQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHEFV 402
K + LEH R+ +Q+ L+ ++T D++ + + T+ + Y EDH+ +
Sbjct: 464 KAVSRLEHARTRFSTIQE-LYVIKTQPSPPDIQTRDSSYTSGVCCYGEDHDVI 515
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 29.1 bits (62), Expect = 3.1
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Frame = +1
Query: 193 QRKGQKIDIDVYGKPSEKQLRELEHVRSLSKELQDNLHELETA---VRIAD----VENQA 351
QRK +K + KP K + + S +E +D+ E++T +++A +++
Sbjct: 110 QRKPEK-KANHEKKPKVKGTKNFS-LLSFGEEAEDDEEEVKTVSKKMKMASSHDILDDPL 167
Query: 352 MNPTAPMLDYSEDHEFVSANRLNNCYGDEDLVDAKEEEK 468
++ A + S+ + NR N+ GD+D D K+EEK
Sbjct: 168 LSKEAAVPQESQPVKETERNRKNSSSGDDDSDDEKQEEK 206
>SB_13975| Best HMM Match : SGS (HMM E-Value=3.4)
Length = 473
Score = 29.1 bits (62), Expect = 3.1
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Frame = +1
Query: 130 EESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLRELEHVRSLSKELQDNLHE 309
E + + P M K E QR+ +K++ +P+ QL + E + +D E
Sbjct: 86 EMEIAVKLRPTGRMMAK--EVQREPEKVEFSFKLRPTGIQLVDKED------QDEDRGEE 137
Query: 310 LETAVRIADVENQAMNPTA-PMLDYSEDHEFVSANRLNNCYGDEDLVDAKEEEKRRLTKD 486
AV + TA P D ++ ++ +L D +DAKEEEKRR +
Sbjct: 138 SANAVIPVRLRPVGQRGTAKPRRDEPQEEPEIAV-KLRLARERLDALDAKEEEKRRQEEH 196
Query: 487 GRISLKASR 513
+ ++ R
Sbjct: 197 VHVPIRMER 205
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 29.1 bits (62), Expect = 3.1
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Frame = +1
Query: 73 TLYFVQVQTRAVLGMNFELEESLLTQSGPVSERMEKWTEAQRKGQ----KIDIDVYGKPS 240
T F Q + +N + +E S+R E T + KG+ KID V P
Sbjct: 30 TFIFCQQEKETSRNLNLDNQEEF--PRSIESQREEPCTAEKPKGEIQEDKIDSSVT-LPC 86
Query: 241 EKQL-RELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHEFVSANRL 417
E Q E+ + S+ + +N + A+ + T + + +
Sbjct: 87 ELQKDEEVNEIHSVDNKTDENREDKAVIKHSAECVESTESSTESRTELTSKAILSTEEET 146
Query: 418 NNCYGDEDLVDAKEEEKRRLTKDGRISLKASRVIEKV 528
+ G E+ D+K+++KR+ +D + S +++R+ E V
Sbjct: 147 S---GAEEHPDSKKKQKRKSKEDLQPSRRSNRIHESV 180
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +1
Query: 253 RELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLD------YSEDHEFVSANR 414
RE+ ++EL +LH +T V + EN+ + M++ Y HE S R
Sbjct: 500 REVSEKTKENQELTQSLHASQTRVMSLETENRILENQVRMMEESNKDLYKNLHEIRSKLR 559
Query: 415 LNNCYGDEDLVDAKEEEKRRLTK 483
+ DE L K E R+L++
Sbjct: 560 IQESKVDE-LRIQKSESVRKLSQ 581
>SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33)
Length = 418
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 143 SPRADPSQRGWRNGRKPRGKVRKST*TFTGNHQRNNSGNWN 265
SP PS GW +P + + +G H+ NN+G N
Sbjct: 378 SPIQRPSTSGWNREVEPLSQYKNQPELLSGVHRLNNNGPCN 418
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 265 HVRSLSKELQDNLHELETAVRIADVENQAMNPT---APMLDYSEDHEFVSANRLNNCYGD 435
HV + K+ + ++++E + V+NQ + T +LD +++ V + N +
Sbjct: 1959 HVHASDKDQEQEMYKIEIQAMDSSVDNQKVGSTHVIVTLLDINDNSPIVKPKKFNVTVQE 2018
Query: 436 EDLVDA 453
+ LV+A
Sbjct: 2019 DLLVNA 2024
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2
Query: 451 RQPSLRRRSNCSAGSRTRIRGLRSSP 374
R PSL RRS +GSR R R SP
Sbjct: 131 RSPSLERRSRSRSGSRERRRSPSRSP 156
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +1
Query: 250 LRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPML-DYSEDHE-FVS----AN 411
L + V + +E+ D++ ++ V+ A++E + P+ D+ +D E F S AN
Sbjct: 857 LHKSSEVEPIQEEMYDDVDQVADQVK-AELERNTFFLSEPISEDFYDDLETFTSTLPAAN 915
Query: 412 RLNNCYGDEDLVD 450
L C GDED D
Sbjct: 916 GLGACAGDEDFGD 928
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 238 SEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQA 351
S+K L R+ KEL N+ ELE + E+QA
Sbjct: 1122 SQKHTETLSSQRAKEKELHTNIKELEAKITTLTEESQA 1159
>SB_23812| Best HMM Match : Filament (HMM E-Value=0.05)
Length = 307
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 241 EKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAM 354
+K L EL+ R+ ++ELQ LH+LE + D + +A+
Sbjct: 51 KKVLSELQSCRTENQELQGRLHQLELNSGMRDSDLRAV 88
>SB_36688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -2
Query: 478 SVYVFLLLWRQPSLRRRSN---CSAGSRTRIRGLRSSPAWVXXXXXXXSPRLRC-GQRFL 311
+V VF L WR+ SLR ++N S + GL + P + + C G RFL
Sbjct: 21 NVTVFFLFWRRSSLRVKANYILASLAFSDCMSGLLAIPLLIACSSMSVYDEVVCVGMRFL 80
>SB_20598| Best HMM Match : Herpes_UL49_2 (HMM E-Value=6.4)
Length = 292
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 124 ELEESLLTQSGP-VSERMEKWTEAQRKGQKIDIDVYGKPSEKQLRELEHVRSLSKE 288
EL E L + VS ++WT+AQR+ +DI + P KQ +L+HV SL E
Sbjct: 55 ELNEKLFEERKELVSNWFDRWTDAQRR-TILDIII---PKCKQ-HQLQHVFSLLDE 105
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 111 RDELRARRIAAHPERTRLREDGEMDGSPEERSEN 212
RD+ + R+ A E + ++ED ++ P+E +EN
Sbjct: 168 RDKRKRRKAAKENEGSNIKEDLPLENRPQEVAEN 201
>SB_375| Best HMM Match : GalP_UDP_transf (HMM E-Value=3.2)
Length = 364
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 205 QKIDIDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADV 339
Q I D KPS+K+ +L+++L D L EL + VR ADV
Sbjct: 36 QSITPDTATKPSDKEF-------TLAEQLTDTLKELTSQVRPADV 73
>SB_57437| Best HMM Match : GalP_UDP_transf (HMM E-Value=5.7)
Length = 183
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 205 QKIDIDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADV 339
Q I D KPS+K+ +L+++L D L EL + VR ADV
Sbjct: 36 QSITPDTATKPSDKEF-------TLAEQLTDTLKELTSQVRPADV 73
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.5 bits (58), Expect = 9.4
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Frame = +1
Query: 106 VLGMNFELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLRELEHVRSLSK 285
V+ ++ ELEE SER+ K + + +G D +GK + + +
Sbjct: 1383 VISLSHELEE--YQDKLAESERLRKLAQTELEGVMESKDDFGKNVHELEKAKRSLEQQLA 1440
Query: 286 ELQDNLHELETAVRI-ADVENQAMNPTAPMLDYSEDHEFVSANRLNNCYGDEDLVDAKEE 462
E++ + ELE +++ D Q + D D + A+R DE AKE
Sbjct: 1441 EMKQTMEELEDELQVKEDGLRQLKKYQQQLKDIQRDLDDARASR------DEIAEHAKEN 1494
Query: 463 EKR 471
E +
Sbjct: 1495 EHK 1497
>SB_42304| Best HMM Match : NHL (HMM E-Value=0)
Length = 1279
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 460 LLWRQPSLRRRSNCSAGSRTRIRGLRSSPAW 368
LL + P+ R +S G + + RGLR+S AW
Sbjct: 380 LLQKLPANRNKSYPPTGLKCKERGLRASVAW 410
>SB_39048| Best HMM Match : RVT_1 (HMM E-Value=1.9e-23)
Length = 1062
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +1
Query: 238 SEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHEFVSANRL 417
S +Q + L +R + +L+ +L +++ + A EN+ + L ++ F A++
Sbjct: 987 STQQTQTLVELREENNKLRAHLSSIQSEISYAKEENKILTQERDSLIFALQIVFREASQA 1046
Query: 418 NNCY 429
N C+
Sbjct: 1047 NQCH 1050
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 27.5 bits (58), Expect = 9.4
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +1
Query: 121 FELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLRELEHVRSLSKELQDN 300
+E+++S Q ++ + E R Q+ ++ +E+Q +E E +R+ + EL +
Sbjct: 1011 YEIQDSFEAQLLDLTSSRDNDVEILRSEQE---SMHQVLTERQ-QECETLRNTTNELITS 1066
Query: 301 LHELETAVRIADVENQAMNPTAPMLD-YSEDHEFVSANRLNNCYGDEDLVDAKEEEKRRL 477
+HE + EN+++ + +D N E LV + EE + L
Sbjct: 1067 IHEKQQVYEELSEENRSLAEHVQESERLLQDLRNEKENLRALLESKEQLVMSYSEEMKNL 1126
Query: 478 TKD 486
TKD
Sbjct: 1127 TKD 1129
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 205 QKIDIDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYS 384
+K+++ SEK + + S+S++ ++ E E D EN +PT D+S
Sbjct: 605 EKLELTYDLGASEKDIWRRGGLDSISEDEEEE--EDEATSPETDKENPVTSPTRTRFDFS 662
Query: 385 EDHEFVSANRLNNC-YGDEDLVDAKEEEKR 471
+S R N + +E L K + +R
Sbjct: 663 PKLNMLSRRRSNPLRFANESLCTNKVQNRR 692
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,334,370
Number of Sequences: 59808
Number of extensions: 297874
Number of successful extensions: 1136
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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