Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F01
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   3.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   6.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 175 CRDTCFSFFRLLFIFYDFIS 116
           C++ CF F     IF  F++
Sbjct: 526 CKNFCFGFITKQLIFMIFVT 545


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 279 NVYLHIYFIYISRMTL 232
           ++YL+ Y ++++ MTL
Sbjct: 75  SLYLNAYHVFVTMMTL 90


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 296 LCFIFLMFIYISILY 252
           L F+F  FIY+  +Y
Sbjct: 143 LVFVFCYFIYLFTVY 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,951
Number of Sequences: 336
Number of extensions: 807
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)