Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F01
         (346 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1046 - 33740809-33741201,33741359-33741511,33741583-337424...    27   3.9  
05_01_0135 + 908803-909059,913133-913187,913499-914047,914140-91...    26   9.1  

>02_05_1046 -
           33740809-33741201,33741359-33741511,33741583-33742461,
           33742622-33742630
          Length = 477

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 71  APYVKRKRYXVAEEWANKIIEYEEQTEETKASISTSQISY*W 196
           AP++K  R  V + W N      E+ EE +AS+ +S  S  W
Sbjct: 338 APFLKELRMTVWDHWCNM-----EKDEEMRASLYSSNKSVEW 374


>05_01_0135 +
           908803-909059,913133-913187,913499-914047,914140-914365,
           914446-914906
          Length = 515

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 201 YIHQYEIWDVEILALVSSVCSSYSMIL 121
           Y +QY IW   +L  ++   +SYS +L
Sbjct: 119 YYYQYYIWRRRLLVAIAICVASYSYLL 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,366,444
Number of Sequences: 37544
Number of extensions: 72161
Number of successful extensions: 159
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)