Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F01
         (346 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-524|AAF45870.2|  558|Drosophila melanogaster CG10801-PA...    29   2.1  
AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p pro...    28   3.7  
AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA ...    28   3.7  
AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-P...    27   5.0  
AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.    27   5.0  

>AE014298-524|AAF45870.2|  558|Drosophila melanogaster CG10801-PA
           protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 110 EWANKIIEYEEQTEETKASISTSQI 184
           +W N + EYE Q EE K  IS +++
Sbjct: 10  QWNNILQEYERQVEEQKQEISPAEV 34


>AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p
           protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 38  SGVVVVYRMXYAPYVKRKRYXVAEEWANKIIEYEEQTEETKASIS 172
           +GVV+     + PY       +A+   N++IEYE+ T  T++ ++
Sbjct: 204 AGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLA 248


>AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA
           protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 38  SGVVVVYRMXYAPYVKRKRYXVAEEWANKIIEYEEQTEETKASIS 172
           +GVV+     + PY       +A+   N++IEYE+ T  T++ ++
Sbjct: 204 AGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLA 248


>AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-PA,
            isoform A protein.
          Length = 2376

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 92   RYXVAEEWANKIIEYEEQTEETKASIS 172
            R  +AEEW NK+ E EE+ +     IS
Sbjct: 1654 RQQMAEEWMNKVAEREERRQHKIIRIS 1680


>AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.
          Length = 2376

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 92   RYXVAEEWANKIIEYEEQTEETKASIS 172
            R  +AEEW NK+ E EE+ +     IS
Sbjct: 1654 RQQMAEEWMNKVAEREERRQHKIIRIS 1680


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,235,334
Number of Sequences: 53049
Number of extensions: 124598
Number of successful extensions: 278
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)