Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_F01
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28971-4|AAK68668.1|  628|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    28   1.6  
AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical ...    27   3.6  
U42830-5|AAC48280.2|  437|Caenorhabditis elegans Hypothetical pr...    27   4.8  
AF024503-15|AAG24087.2|  289|Caenorhabditis elegans Serpentine r...    26   6.3  

>U28971-4|AAK68668.1|  628|Caenorhabditis elegans Hypothetical
           protein B0244.10 protein.
          Length = 628

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 184 DLGCRDTCFSFFRLLFIFYDF 122
           D+  RDT F+FF +LFI YDF
Sbjct: 387 DIPFRDT-FAFFAVLFIIYDF 406


>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 175 CRDTCFSFFRLLFIFYDFISPFFSYXIPL 89
           C  + F+FFRL+F F++FI   F + + L
Sbjct: 382 CFRSTFTFFRLIFPFFEFIFLKFHFKLLL 410


>AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical
           protein W06D4.4 protein.
          Length = 630

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -2

Query: 201 YIHQYEIWDVEILALVSSVCSSYSMIL 121
           YIH Y++ +VEI+  V+S+  S  ++L
Sbjct: 402 YIHYYKLTNVEIIEKVTSLTDSPDIVL 428


>U42830-5|AAC48280.2|  437|Caenorhabditis elegans Hypothetical
           protein C53B7.7 protein.
          Length = 437

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 163 CFSFFRLLFIFYDFISPFFSY 101
           C  F +LLFI+YD+   F +Y
Sbjct: 93  CHFFCKLLFIYYDYQYRFINY 113


>AF024503-15|AAG24087.2|  289|Caenorhabditis elegans Serpentine
           receptor, class x protein22 protein.
          Length = 289

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 163 CFSFFRLLFIFYDFISPFFSY 101
           CF  F + F+FYD +  +F Y
Sbjct: 128 CFIGFSICFLFYDVLGCYFYY 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,944,454
Number of Sequences: 27780
Number of extensions: 73011
Number of successful extensions: 217
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)