Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E20
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 296 1e-80
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 284 5e-77
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 252 2e-67
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 248 6e-66
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 245 4e-65
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 42 8e-04
05_05_0162 + 22838907-22839070,22839180-22840063,22841164-22841228 32 0.49
01_03_0295 + 14750162-14750369,14751601-14752019 32 0.49
10_08_0965 + 21915842-21916906 30 2.0
11_03_0028 - 9080650-9080667,9080701-9080794,9082099-9082185,908... 30 2.6
05_03_0190 + 9485701-9485806,9487182-9487368,9489662-9489733,949... 29 4.6
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 28 8.0
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 296 bits (727), Expect = 1e-80
Identities = 140/223 (62%), Positives = 170/223 (76%)
Frame = +1
Query: 82 MSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEG 261
M K LN+ L E DPE+ DII EK RQ GLE+I SENFTSV V+Q + S + NKYSEG
Sbjct: 29 MWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 88
Query: 262 MPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHG 441
P RYYGGNEYID E L Q R+LEA+RL +WGVNVQP SGSPANF VYT +++PH
Sbjct: 89 YPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHE 148
Query: 442 RIMGLDLPDGGHLTHGFFTATKKISATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPR 621
RIM LDLP GGHL+HG+ T TKKISA SIFFE+MPY++D +GLIDYD++ ++A LF+P+
Sbjct: 149 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPK 208
Query: 622 LIIAGMSCYSRCLDYKRFREIADANGAYLMADMAHVSGLVAAG 750
LI+AG S Y+R DY R R++ D A L+ADMAH+SGLVAAG
Sbjct: 209 LIVAGASAYARLYDYDRMRKVCDKQKAILLADMAHISGLVAAG 251
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3
Query: 759 APFEYCDIVTTTTHKTLRGP 818
+PF+Y D+VTTTTHK+LRGP
Sbjct: 255 SPFDYADVVTTTTHKSLRGP 274
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 284 bits (697), Expect = 5e-77
Identities = 134/211 (63%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
Frame = +1
Query: 118 ADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYGGNEY 297
ADP + D++ +EK RQR+G+E+IASENFTS V++ L S L NKYSEGMP RYYGGN+
Sbjct: 15 ADPLVHDLLEREKRRQRSGIELIASENFTSFAVMEALGSALTNKYSEGMPGARYYGGNDV 74
Query: 298 IDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIMGLDLPDGGH 477
IDEIE L ++R+L A+RL + WGVNVQPYSGSPA FA YT ++ PH RIMGLDLP GGH
Sbjct: 75 IDEIENLCRDRALAAFRLDAASWGVNVQPYSGSPATFAAYTALLNPHDRIMGLDLPSGGH 134
Query: 478 LTHGFFTA-TKKISATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSR 654
LTHG++TA KKISATSI+FES+PYKV +G IDY+KL E A F+P+LII G S Y R
Sbjct: 135 LTHGYYTAGGKKISATSIYFESLPYKVSAATGYIDYEKLEEKALDFRPKLIICGGSAYPR 194
Query: 655 CLDYKRFREIADANGAYLMADMAHVSGLVAA 747
DY + R +AD GA L+ DMAH+SGLVAA
Sbjct: 195 DWDYAKLRAVADKVGALLLCDMAHISGLVAA 225
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3
Query: 762 PFEYCDIVTTTTHKTLRGP 818
PFEYCD+VTTTTHK+LRGP
Sbjct: 231 PFEYCDVVTTTTHKSLRGP 249
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 252 bits (618), Expect = 2e-67
Identities = 119/178 (66%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Frame = +1
Query: 217 LQCLSSCLHNKYSEGMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGS 396
++ L S L NKYSEGMP RYYGGNE IDE+E L + R+L A+ L E WGVNVQPYSGS
Sbjct: 1 MEALGSPLTNKYSEGMPGSRYYGGNEVIDEVEELCRARALAAFHLDPEAWGVNVQPYSGS 60
Query: 397 PANFAVYTGIVEPHGRIMGLDLPDGGHLTHGFFTA-TKKISATSIFFESMPYKVDPKSGL 573
PANFA YTG+++PH RIMGLDLP GGHLTHG++TA KKISATSI+FES+PYKV ++G
Sbjct: 61 PANFAAYTGLLQPHERIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSETGY 120
Query: 574 IDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIADANGAYLMADMAHVSGLVAA 747
+DYDKL E A F+P+LII G S Y R DY RFR IAD GA L+ DMAH+SGLVAA
Sbjct: 121 VDYDKLEEKAMDFRPKLIICGGSAYPRDWDYARFRAIADKCGAMLLCDMAHISGLVAA 178
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 762 PFEYCDIVTTTTHKTLRGP 818
PF+Y D+VTTTTHK+LRGP
Sbjct: 184 PFQYSDVVTTTTHKSLRGP 202
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 248 bits (606), Expect = 6e-66
Identities = 123/217 (56%), Positives = 154/217 (70%), Gaps = 1/217 (0%)
Frame = +1
Query: 100 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRY 279
N L EADP++ ++ E+DRQ G+E+IASENF VL+ L S L NKYSEG P RY
Sbjct: 141 NQALAEADPDVHALMELERDRQVRGIELIASENFVCRAVLEALGSHLTNKYSEGHPGARY 200
Query: 280 YGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIMGLD 459
YGGN++ID IE L R+L A+ L WGVNVQPYS + AN AVYTG++ P RIMGL+
Sbjct: 201 YGGNQHIDGIERLCHERALAAFGLDPACWGVNVQPYSCTSANLAVYTGLLLPKDRIMGLE 260
Query: 460 LPDGGHLTHGFFTAT-KKISATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAG 636
P GGH++HG++T + KK+S SIFFES+ YKV+P++G IDYDKL E A F P+++I G
Sbjct: 261 PPSGGHVSHGYYTPSGKKVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICG 320
Query: 637 MSCYSRCLDYKRFREIADANGAYLMADMAHVSGLVAA 747
S Y R D+ R R IAD GA LM DMAH+SGLVAA
Sbjct: 321 GSSYPREWDFARMRLIADKCGAVLMCDMAHISGLVAA 357
Score = 44.8 bits (101), Expect = 9e-05
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +3
Query: 756 RAPFEYCDIVTTTTHKTLRGP 818
R+PF+YCD+VT+TTHK LRGP
Sbjct: 361 RSPFDYCDVVTSTTHKNLRGP 381
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 245 bits (599), Expect = 4e-65
Identities = 122/239 (51%), Positives = 163/239 (68%), Gaps = 7/239 (2%)
Frame = +1
Query: 52 AAKRYISSTKMSAKLLNSNLW------EADPELFDIIVKEKDRQRAGLEMIASENFTSVP 213
AAKR ++ + A+ W EADP++ +++ +E+ RQ G+E+IASEN+
Sbjct: 89 AAKRRAAAGGLEARRAAVRAWGCQPLTEADPDVHELMERERRRQAGGVELIASENYACRA 148
Query: 214 VLQCLSSCLHNKYSEGMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSG 393
VL L S L NKYSEG+P RYY GN++ID IE L +R+L A+ L WGVNVQPYS
Sbjct: 149 VLDALGSHLTNKYSEGLPGARYYCGNQHIDAIERLCCDRALAAFGLDPSRWGVNVQPYSC 208
Query: 394 SPANFAVYTGIVEPHGRIMGLDLPDGGHLTHGFFTAT-KKISATSIFFESMPYKVDPKSG 570
+ ANFAVYTG++ P+ RIMGLD P GGH++HG++T + KK+S SIFFE++ Y+V+P +G
Sbjct: 209 TSANFAVYTGLLLPNDRIMGLDSPSGGHVSHGYYTPSGKKVSGASIFFENLSYRVNPHTG 268
Query: 571 LIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIADANGAYLMADMAHVSGLVAA 747
IDYDK+ E A F P+++I G S Y R DY R R +AD GA LM DMA +SGLVAA
Sbjct: 269 YIDYDKVEEKAVDFHPKILICGASSYPRDWDYARMRLVADKCGAVLMCDMAQISGLVAA 327
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 756 RAPFEYCDIVTTTTHKTLRGP 818
R PF+YCDIVT+TTHK+LRGP
Sbjct: 331 RNPFDYCDIVTSTTHKSLRGP 351
>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 451 GLDLPDGGHLTHGFFTATKKISATSIFFE-SMPYKVDPKSG 570
GL+LP GGH++ + T + K+S+ S+F E M Y V+P++G
Sbjct: 1611 GLELPSGGHVSCRYCTPSGKLSSASVFIEMEMSYMVNPQTG 1651
>05_05_0162 + 22838907-22839070,22839180-22840063,22841164-22841228
Length = 370
Score = 32.3 bits (70), Expect = 0.49
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +1
Query: 433 PHGRIMGLDLPDGGHLTHGFFTATKKISATSIFFESMPYKVDPKSGLIDYDKLAETAKLF 612
P R +++ GH+ H F + T + A FF S+P+ +S +ID+ +A +++
Sbjct: 116 PPDRYAVIEVGVNGHVMHRFLSETGRWEAMPSFFSSLPF---GRSTIIDHPPVAFGGRMW 172
Query: 613 KPRLIIAGMSCYSRCLDYKRFREIADANGAYLMAD 717
L +S + D FR +A G+ L A+
Sbjct: 173 WIDLGWGAVS-FDPFADEPDFRIVALPTGSVLPAE 206
>01_03_0295 + 14750162-14750369,14751601-14752019
Length = 208
Score = 32.3 bits (70), Expect = 0.49
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 822 TXDHAASYEWWWSQYRSIRTGLGIT 748
T DH WWW Q+ S R G+G +
Sbjct: 140 TGDHLRQKWWWWGQHWSCRLGIGFS 164
>10_08_0965 + 21915842-21916906
Length = 354
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 834 YDTGTXDHAASYEWWW 787
YD GT AA+ EWWW
Sbjct: 306 YDAGTVTAAATAEWWW 321
>11_03_0028 -
9080650-9080667,9080701-9080794,9082099-9082185,
9082276-9082333,9083535-9083598,9083837-9083898,
9083976-9084027,9084410-9084530,9085369-9085463
Length = 216
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 312 DTGTEQVSGSIQIKIGRMGRQCTAIFRLSGELC 410
D+G+ I I IGR G C+++ R G+ C
Sbjct: 135 DSGSGPRLDGINISIGRRGESCSSVCRAKGQSC 167
>05_03_0190 +
9485701-9485806,9487182-9487368,9489662-9489733,
9490089-9490160,9490514-9490585,9490845-9490916,
9491355-9491426,9491503-9491577,9492008-9492073,
9492144-9492188,9492276-9492340,9492429-9492811,
9492878-9493076,9493150-9493308,9493386-9493504,
9493652-9493862,9493993-9494224,9494307-9494457,
9494550-9494870
Length = 892
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 354 IGRMGRQCTAIFRLSGELCRLYRHCRTPWQD 446
+GR G++ ++ + +SGELC +T W D
Sbjct: 43 LGRWGKKASSEWNISGELCSGLASDKTNWDD 73
>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -2
Query: 780 YRSIRTGLGITCSNQSRYVSHISHQISSICVCDLTEPLIIETS*VTAHASDDQTRLEQLR 601
YRS + QS Y+ + S +SSI V DL + ++ T TA + Q+R
Sbjct: 917 YRSAGRSIVFDWQQQSGYL-YASGDMSSILVWDLDKEQLVNTIQSTADSGISALSASQVR 975
Query: 600 C 598
C
Sbjct: 976 C 976
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,673,895
Number of Sequences: 37544
Number of extensions: 515884
Number of successful extensions: 1247
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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