Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E17
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical... 77 9e-15
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 33 0.26
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 33 0.26
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 29 2.5
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 5.7
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 28 5.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.7
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 28 5.7
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 28 5.7
AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical ... 28 5.7
U23177-5|AAM22056.1| 192|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 7.5
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 7.5
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 27 9.9
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 27 9.9
>AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical
protein Y57A10A.29 protein.
Length = 119
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/83 (39%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 293 QPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFY 472
+ ++ ++ARL YQS+KRG+LEND+LL FA++ L +E + YD+LIN +WD+FY
Sbjct: 27 EKIDAKRARLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFY 86
Query: 473 WIVEKKPTPKEFDN-EIMNLLKK 538
++ KK P++ ++ ++ +KK
Sbjct: 87 YLSNKKSPPEDVESCQVYQKVKK 109
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 176 LNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 355
LN+S N ++ FSS +D +Y ++ VE Q EKR A LH + L
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346
Query: 356 NDLL 367
+L
Sbjct: 347 GGVL 350
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 176 LNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 355
LN+S N ++ FSS +D +Y ++ VE Q EKR A LH + L
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346
Query: 356 NDLL 367
+L
Sbjct: 347 GGVL 350
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/82 (19%), Positives = 38/82 (46%)
Frame = +2
Query: 110 RLSLSKIDKNNMNLIKMLHTRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEK 289
++ + + +KN+ +++K LH + N N+ A S ++ E ++ +K
Sbjct: 50 KMEILEREKNSQDMLKQLHEDKKEMEGNIQSNIN--AMKSENLQYQTQSHQEKKVFAEKK 107
Query: 290 QQPLEKRKARLHYQSRKRGMLE 355
Q L++ A+L + + +E
Sbjct: 108 LQKLKENGAKLSLEIQSTSAIE 129
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 290 QQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDW--- 460
Q E ++ HY+ R + ML++++ + L EK + L N+
Sbjct: 690 QSEQEMKQLEAHYE-RAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGLNEQQLH 748
Query: 461 DIFYWIVEKKPTPKEFDN 514
+IF W+ E+K T +E +N
Sbjct: 749 EIFNWVSEEKATREEMEN 766
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 335 RKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLIN-SPSNDWDIFYWIVEKK 490
R+RG+ +DL F ++ + NEK ++YD+ S DWD + ++ K
Sbjct: 181 RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPK 233
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 500 KEFDNEIMNLLKKHAKNEDKIALRQP 577
K F E+ +L KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 500 KEFDNEIMNLLKKHAKNEDKIALRQP 577
K F E+ +L KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 197 LKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQP 298
++ + VA+SS T + T Y+EI +DV+ P
Sbjct: 2511 IEQITVVAYSSPTKQSKTTVYLEIGPFDVQPSLP 2544
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 383 KKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPK--EFDNEIMNLLKKHAKNE 553
KK +N F +K T + + + +N WD F + KPTPK F +M+ K ++E
Sbjct: 262 KKVVNTFRQKPTPAPE-VTTTKANIWDKFTVGNKAKPTPKYIPFWQRLMSTTSKPIEDE 319
>AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical
protein Y73B3B.2 protein.
Length = 240
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 479 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 577
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMP 224
>U23177-5|AAM22056.1| 192|Caenorhabditis elegans Hypothetical
protein C56G2.9 protein.
Length = 192
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 56 KNDHLYLFDFDFETILLKRLSLSKIDKNNMNLIKMLHTRTLNLS 187
KN L D D +T LK +K DK+ +N K +H + +NLS
Sbjct: 17 KNGELIFDDLDAKTRDLKLSDQAKNDKSELNRRKSVH-KIINLS 59
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 479 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 577
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 479 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 577
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 547 FSMFFEKIHNFIVKFFRSWLLFNYPIEYVPIVAG*VYETIVHHSLFFIKTIQILL 383
FSM F I + +F P+ Y P++ + ++HHS IQILL
Sbjct: 78 FSMIFLDIIGRTLVYFTPLCPIIAPMFYEPLIGFKIMMIVLHHSRACKSLIQILL 132
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +2
Query: 71 YLFDFDFETILLKRLSLSKIDKNNMNLIKMLHTRT-LNLSYNALKNVQKVAFSSNTTNNM 247
Y F D ETI +++K N + R +N + L+NVQK + +
Sbjct: 549 YNFSIDDETISEPTPVPQQLEKKTENCSECNDVRMEMNTVKDVLQNVQKQLKNMQQNSEQ 608
Query: 248 DTTYM---EIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKK 388
T + + + EKQ E+RK H +S ++ ++ + L ++
Sbjct: 609 FETKLVASDNKTKNFEKQLEDERRKNNKHLESSRKTLISKNEQLEALKRR 658
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +2
Query: 71 YLFDFDFETILLKRLSLSKIDKNNMNLIKMLHTRT-LNLSYNALKNVQKVAFSSNTTNNM 247
Y F D ETI +++K N + R +N + L+NVQK + +
Sbjct: 583 YNFSIDDETISEPTPVPQQLEKKTENCSECNDVRMEMNTVKDVLQNVQKQLKNMQQNSEQ 642
Query: 248 DTTYM---EIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKK 388
T + + + EKQ E+RK H +S ++ ++ + L ++
Sbjct: 643 FETKLVASDNKTKNFEKQLEDERRKNNKHLESSRKTLISKNEQLEALKRR 692
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,241,132
Number of Sequences: 27780
Number of extensions: 327013
Number of successful extensions: 1077
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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