Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E15
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024765-4|AAF60525.1| 83|Caenorhabditis elegans Human ddp rel... 77 2e-14
AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc fi... 75 7e-14
U56965-7|AAB52665.1| 122|Caenorhabditis elegans Peroxisome asse... 54 2e-07
AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical ... 36 0.029
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 36 0.051
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 36 0.051
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 31 0.83
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 31 0.83
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 31 0.83
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 31 0.83
AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical... 30 2.5
AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc fi... 30 2.5
AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical ... 29 3.3
AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical ... 29 3.3
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81514-4|CAB04191.1| 78|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 7.7
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 28 7.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 7.7
>AC024765-4|AAF60525.1| 83|Caenorhabditis elegans Human ddp
related protein 1 protein.
Length = 83
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = +1
Query: 169 DNVDPQLENFIL---AETQKQRFQVLVHGLTDTCWDTCMG--KPSTRLDSKTEVCIMNCV 333
D+ DPQL F+ AETQ+Q+F VH LT CWD C +P +++D KT+ CI NCV
Sbjct: 2 DSADPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCIQNCV 61
Query: 334 ERFIDATTYITKRL 375
R IDA+ ++ + L
Sbjct: 62 NRMIDASNFMVEHL 75
>AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 83
Score = 74.9 bits (176), Expect = 7e-14
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Frame = +1
Query: 169 DNVDPQLENFIL---AETQKQRFQVLVHGLTDTCWDTCMG--KPSTRLDSKTEVCIMNCV 333
D+ DPQL F+ AETQ+Q+F VH LT CWD C +P +++D KT+ C NCV
Sbjct: 2 DSADPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCFQNCV 61
Query: 334 ERFIDATTYITKRL 375
R IDA+ ++ + L
Sbjct: 62 NRMIDASNFMVEHL 75
>U56965-7|AAB52665.1| 122|Caenorhabditis elegans Peroxisome
assembly factor protein3 protein.
Length = 122
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Frame = +1
Query: 436 MFSNIKNFLNRHRRKFFVTGAVVGGL--YVLTSYAQKKLRDWQEKEAKKFFEMTRKKQHF 609
M ++ F R++ K G +VG YV +S K L + + + R+ F
Sbjct: 1 MLASAWEFAKRNKGKIIAGGVLVGSAIAYVQSSSRPKTLE--KVSTSSELPNQARRHYIF 58
Query: 610 EGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENP----EDKLALWEQLKI 762
+ T R+C+Q+I L + I + + E I +KLQ P E K+ LWEQLK+
Sbjct: 59 DSTHRSCDQSITDLIPSIVTQIQARFDVESIQEKLQNTPDLTAEQKMQLWEQLKV 113
>AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical
protein Y116F11B.11 protein.
Length = 511
Score = 36.3 bits (80), Expect = 0.029
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 559 EKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENPEDK 735
EK+++KF ++ + Q + Q I + IVSE + L +EI +K+ E DK
Sbjct: 286 EKDSEKFLKVIQVVQQLRSLNKDSVQNIQQIPPIVSEFLKELATVKEIPKKMSEKSNDK 344
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 35.5 bits (78), Expect = 0.051
Identities = 17/82 (20%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 142 NQPLIMSETDNVDPQLENFILAETQKQ----RFQVLVHGLTDTCWDTCMGKPSTRLDSKT 309
+Q L + + P+ + +++ ++Q Q LV +++ C + C+ P + L S
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 310 EVCIMNCVERFIDATTYITKRL 375
+ C+ C++RF+++ +++ L
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTL 83
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 35.5 bits (78), Expect = 0.051
Identities = 17/82 (20%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 142 NQPLIMSETDNVDPQLENFILAETQKQ----RFQVLVHGLTDTCWDTCMGKPSTRLDSKT 309
+Q L + + P+ + +++ ++Q Q LV +++ C + C+ P + L S
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 310 EVCIMNCVERFIDATTYITKRL 375
+ C+ C++RF+++ +++ L
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTL 83
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 247 LTDTCWDTCMGKPSTR-LDSKTEVCIMNCVERFIDATTYITKR 372
+ + C+++C+ + +R + K E C NC+++F+ T +++R
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQR 62
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 247 LTDTCWDTCMGKPSTR-LDSKTEVCIMNCVERFIDATTYITKR 372
+ + C+++C+ + +R + K E C NC+++F+ T +++R
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQR 62
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.83
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +1
Query: 559 EKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENPEDKL 738
+++++ F ++ + Q ++ Q I + +VSE + +L EI K++EN +K
Sbjct: 553 KQDSEHFQKVIQVIQKMRNLDKDSVQNIQGIPSVVSEFLKNLAKVREISDKMKENSNNKT 612
Query: 739 ALWEQLKITIFTRICVL------VYGLCMLQVALRVQLNV 840
+ L I + VYGL L+ + + NV
Sbjct: 613 FVMNALSFNKSDSIKSIVSSVQNVYGLLDLEAPINLLKNV 652
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 247 LTDTCWDTCMGKPSTR-LDSKTEVCIMNCVERFIDATTYITKR 372
+ + C+++C+ + +R + K E C NC+++F+ T +++R
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQR 62
>AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical
protein Y66D12A.22 protein.
Length = 86
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 202 LAETQKQRFQVLVHGLTDTCWDTCMGKP--STRLDSKTEVCIMNCVERFIDATTYITKRL 375
+AE + + + +T++C C+ + L VC+ CV +++D + KRL
Sbjct: 10 VAELEVEMMSDMYRRMTNSCQAKCIATAFRESELTKGEAVCLDRCVAKYLDVHEKLGKRL 69
Query: 376 MSTTK 390
S ++
Sbjct: 70 TSMSQ 74
>AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 86
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 202 LAETQKQRFQVLVHGLTDTCWDTCMGKP--STRLDSKTEVCIMNCVERFIDATTYITKRL 375
+AE + + + +T++C C+ + L VC+ CV +++D + KRL
Sbjct: 10 VAELEVEMMSDMYRRMTNSCQAKCIATAFRESELTKGEAVCLDRCVAKYLDVHEKLGKRL 69
Query: 376 MSTTK 390
S ++
Sbjct: 70 TSMSQ 74
>AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical
protein ZK1055.6a protein.
Length = 531
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 490 TGAVVGGLYVLTSYAQKKLRDWQEKEAKKFFEMTRKKQH-FEGTERTCNQTILSLSKIVS 666
+G+VV +LT +KL D+QE E K E R+K+H T ++ L+++V+
Sbjct: 101 SGSVVIDENLLTGL--QKLLDFQETEMNKLNEQLREKEHEILKTIEMASKIGNELNRLVN 158
Query: 667 ESILSLLNTEEIVQKLQENPEDKLALWEQL 756
I ++ +T I + E+ + +L + Q+
Sbjct: 159 SGISNMSHTVFITLEAFEDGDVELDITYQV 188
>AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical
protein ZK1055.6b protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 490 TGAVVGGLYVLTSYAQKKLRDWQEKEAKKFFEMTRKKQH-FEGTERTCNQTILSLSKIVS 666
+G+VV +LT +KL D+QE E K E R+K+H T ++ L+++V+
Sbjct: 134 SGSVVIDENLLTGL--QKLLDFQETEMNKLNEQLREKEHEILKTIEMASKIGNELNRLVN 191
Query: 667 ESILSLLNTEEIVQKLQENPEDKLALWEQL 756
I ++ +T I + E+ + +L + Q+
Sbjct: 192 SGISNMSHTVFITLEAFEDGDVELDITYQV 221
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Frame = +1
Query: 559 EKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQKLQENPEDK- 735
E++++ ++ + Q + + I + +VSE + ++ +E+ K++EN +K
Sbjct: 456 EQDSEDLQKVIQVIQKMRNLDNASVENIKGIPSVVSELLQNISKVKEVSDKMKENSNNKT 515
Query: 736 -----LALWEQLKITIFTRICVLVYGLCMLQVALRVQLNV 840
LA E I VYGL L+ + NV
Sbjct: 516 LVMNALAFKESASIKSIISSVQNVYGLLDLEAPINQLKNV 555
>Z81514-4|CAB04191.1| 78|Caenorhabditis elegans Hypothetical
protein F26F2.5 protein.
Length = 78
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +1
Query: 520 LTSYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEE 699
++SY Q ++ + + + + ++TR+ + R +Q + I SE+ L + +
Sbjct: 1 MSSYNQLRMAEMMDNQNARQNDLTRRMMEMNNSARLSDQARDDRNAIRSENNLKEVYNKL 60
Query: 700 IVQKLQENPED 732
+ + +ENP D
Sbjct: 61 VKAQKKENPSD 71
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 526 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSK 657
S+ + L+DW EK FE++RKK TC + ++ + +
Sbjct: 707 SHELEPLQDWSEK-----FEVSRKKDDIRKMMNTCQEKLIQIKE 745
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 526 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSK 657
S+ + L+DW EK FE++RKK TC + ++ + +
Sbjct: 707 SHELEPLQDWSEK-----FEVSRKKDDIRKMMNTCQEKLIQIKE 745
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 562 KEAKKFFEMTRKKQHFEGTERTCNQTILSLSKIVSESILSLLNTEEIVQK 711
K KF + + +E +T N + LSLSKI++++ L++T + ++K
Sbjct: 469 KIINKFTMLKSLQTQYESAYKTSNSSELSLSKIITDA--GLVDTSKCLEK 516
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 526 SYAQKKLRDWQEKEAKKFFEMTRKKQHFEGTERTCNQTILSLSK 657
S+ + L+DW EK FE++RKK TC + ++ + +
Sbjct: 707 SHELEPLQDWSEK-----FEVSRKKDDIRKMMNTCQEKLIQIKE 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,149,803
Number of Sequences: 27780
Number of extensions: 427114
Number of successful extensions: 1270
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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