Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E14
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   0.90 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.3  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 436 SVEFIPIYKTCF*NYRIYN 492
           +V ++P Y+ C+  Y +YN
Sbjct: 249 AVPYVPFYRYCYRPYPVYN 267


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 241 WTLIMKLHLLYNNSYMVLQYVDSLF 315
           W +IM +  LY+ S MVL Y+D +F
Sbjct: 214 WPIIMII--LYS-SLMVLNYIDEVF 235


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 84  YLILNKALIYQHYAP 128
           YL+LNK L+ +H  P
Sbjct: 29  YLVLNKYLLVKHSKP 43


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 599 YSCDHIIYCFET 564
           ++C H+IY F T
Sbjct: 202 FACTHVIYAFAT 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,204
Number of Sequences: 336
Number of extensions: 3099
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)