Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E14
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023955-1|ABB36459.1| 808|Drosophila melanogaster AT31092p pro... 33 0.44
U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specifi... 30 4.1
AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-P... 30 4.1
AY118292-1|AAM48321.1| 262|Drosophila melanogaster GH01164p pro... 29 7.2
AY095529-1|AAM12260.1| 935|Drosophila melanogaster RE23942p pro... 29 7.2
AY070503-1|AAL47974.1| 292|Drosophila melanogaster GH08896p pro... 29 7.2
AE014298-2820|AAF48937.2| 935|Drosophila melanogaster CG7884-PA... 29 7.2
AE014297-1053|AAF54462.1| 262|Drosophila melanogaster CG16904-P... 29 7.2
AE014296-374|AAN11501.1| 276|Drosophila melanogaster CG12024-PB... 29 7.2
AE014296-373|AAF47582.2| 292|Drosophila melanogaster CG12024-PA... 29 7.2
AE013599-1064|AAM68780.2| 1734|Drosophila melanogaster CG18408-P... 29 7.2
>BT023955-1|ABB36459.1| 808|Drosophila melanogaster AT31092p
protein.
Length = 808
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 294 QHHIAVVVKQVQLHNQSPHRQK*HQHEENLLEEDLAVL 181
QHH A +KQ Q H+ H Q Q ++NLL++ +L
Sbjct: 729 QHHAAETIKQQQQHHLQRHLQHHLQQQQNLLQQQQNLL 766
>U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specific
RNP-type RNA bindingprotein protein.
Length = 808
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 297 LQHHIAVVVKQVQLHNQSPHRQK*HQH 217
LQ H A+ +Q QLH+ PH H H
Sbjct: 110 LQRHTALHQQQQQLHHHQPHHNHHHHH 136
>AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-PB,
isoform B protein.
Length = 810
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 297 LQHHIAVVVKQVQLHNQSPHRQK*HQH 217
LQ H A+ +Q QLH+ PH H H
Sbjct: 110 LQRHTALNQQQQQLHHHQPHHNHHHHH 136
>AY118292-1|AAM48321.1| 262|Drosophila melanogaster GH01164p
protein.
Length = 262
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 625 TASVCYSIGTVVIILYIVLKLFNISKNQIKYL--FHKLVTVFTNIINYRFYNF 473
T S Y + V+ ++ + + + QI +L FH + VFT+ + RFY F
Sbjct: 103 TLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHVFMVFTSHMLIRFYGF 155
>AY095529-1|AAM12260.1| 935|Drosophila melanogaster RE23942p
protein.
Length = 935
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 267 QVQLHNQSPHRQK*HQHEENLLEED 193
Q QLH+Q H H H+ N LEE+
Sbjct: 579 QHQLHHQPNHHHNHHNHQSNDLEEE 603
>AY070503-1|AAL47974.1| 292|Drosophila melanogaster GH08896p
protein.
Length = 292
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +3
Query: 153 NDTNEERRRR---VLLGPLPAGFLR 218
N+T +R RR +LGPLPAGFLR
Sbjct: 137 NNTPTKRSRRWNPPILGPLPAGFLR 161
>AE014298-2820|AAF48937.2| 935|Drosophila melanogaster CG7884-PA
protein.
Length = 935
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 267 QVQLHNQSPHRQK*HQHEENLLEED 193
Q QLH+Q H H H+ N LEE+
Sbjct: 579 QHQLHHQPNHHHNHHNHQSNDLEEE 603
>AE014297-1053|AAF54462.1| 262|Drosophila melanogaster CG16904-PA
protein.
Length = 262
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 625 TASVCYSIGTVVIILYIVLKLFNISKNQIKYL--FHKLVTVFTNIINYRFYNF 473
T S Y + V+ ++ + + + QI +L FH + VFT+ + RFY F
Sbjct: 103 TLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHVFMVFTSHMLIRFYGF 155
>AE014296-374|AAN11501.1| 276|Drosophila melanogaster CG12024-PB,
isoform B protein.
Length = 276
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +3
Query: 153 NDTNEERRRR---VLLGPLPAGFLR 218
N+T +R RR +LGPLPAGFLR
Sbjct: 121 NNTPTKRSRRWNPPILGPLPAGFLR 145
>AE014296-373|AAF47582.2| 292|Drosophila melanogaster CG12024-PA,
isoform A protein.
Length = 292
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +3
Query: 153 NDTNEERRRR---VLLGPLPAGFLR 218
N+T +R RR +LGPLPAGFLR
Sbjct: 137 NNTPTKRSRRWNPPILGPLPAGFLR 161
>AE013599-1064|AAM68780.2| 1734|Drosophila melanogaster CG18408-PB,
isoform B protein.
Length = 1734
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 279 VVVKQVQLHNQSPHRQK*HQHEENLLEEDLAVLY-DDVLHLYH 154
V K V +H ++P R H+ +NL EE+LA+ + + LYH
Sbjct: 1388 VTFKDVNIHFKTPIR---HEQRQNLSEEELAIRQAEHMQKLYH 1427
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,783,525
Number of Sequences: 53049
Number of extensions: 466725
Number of successful extensions: 1105
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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