Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E14
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z70213-5|CAA94174.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 245 VHTVRSSISTKKTCWKRT*QYSTTTFFICIIRHC 144
           V  V+SS S+ KTCW+ T + S T  ++C +  C
Sbjct: 360 VVNVQSSSSSAKTCWQNT-KSSLTNMYVCEVATC 392


>Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical
           protein F25H2.1 protein.
          Length = 457

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 147 MPNDTNEERRRRVLLGPLPAGFLR 218
           M  +T  ERRR+VL+G LP  FLR
Sbjct: 1   MNTETVAERRRQVLVGELPPHFLR 24


>Z70213-5|CAA94174.1|  256|Caenorhabditis elegans Hypothetical
           protein ZK930.6 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 574 VLKLFNISKNQIKYLFHKLVTVFTNIINYRFYNFKNMFYKW 452
           ++ + N     IKY F    T+FT I   R Y  +  F +W
Sbjct: 4   LILILNFQSLLIKYCFDARCTMFTRIYIERLYKLQKDFARW 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,381,741
Number of Sequences: 27780
Number of extensions: 265765
Number of successful extensions: 498
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)