Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E13
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 31 0.77
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 31 1.3
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 31 1.3
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 31 1.3
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 31 1.3
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 31 1.3
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 31 1.3
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 29 3.1
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 57 TTGRRLIDEICQIAAYTPKQTY--SQYIMPYGD-----LNPGARRRHNVRV-VTVGRYRM 212
T+G+ ++IC I TP+ Y + +MP+ D +NP R V++ +T
Sbjct: 162 TSGKLKFNKICSIRVITPRPNYNPNDLVMPHSDDEEDTMNPNRERLSTVKLRLTPTSQAK 221
Query: 213 LKDMVSHKILKTKSEI 260
L+ M S + + +E+
Sbjct: 222 LEQMQSEDVFQFNAEM 237
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 522 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 674
SVD ++ T +Y VEHLA G Q ++ + + K M + + +WA+P+
Sbjct: 19 SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 71
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 522 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 674
SVD ++ T +Y VEHLA G Q ++ + + K M + + +WA+P+
Sbjct: 91 SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 522 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 674
SVD ++ T +Y VEHLA G Q ++ + + K M + + +WA+P+
Sbjct: 36 SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 88
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 522 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 674
SVD ++ T +Y VEHLA G Q ++ + + K M + + +WA+P+
Sbjct: 91 SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 522 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 674
SVD ++ T +Y VEHLA G Q ++ + + K M + + +WA+P+
Sbjct: 91 SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 522 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 674
SVD ++ T +Y VEHLA G Q ++ + + K M + + +WA+P+
Sbjct: 91 SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 42 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVGRYRMLKD 221
G+D+ TTG L + C ++ +T S Y +N R+R VR+ + + +
Sbjct: 453 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELF 512
Query: 222 MVSHKILKTKSEISALTDFLDWLEKEKGDGSVIL--IYHEP 338
V + T++E T L + E+GD IL I ++P
Sbjct: 513 AVYPQPTNTEAETEEAT--LRKIHLERGDPLPILEDIVYQP 551
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 42 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVGRYRMLKD 221
G+D+ TTG L + C ++ +T S Y +N R+R VR+ + + +
Sbjct: 450 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELF 509
Query: 222 MVSHKILKTKSEISALTDFLDWLEKEKGDGSVIL--IYHEP 338
V + T++E T L + E+GD IL I ++P
Sbjct: 510 AVYPQPTNTEAETEEAT--LRKIHLERGDPLPILEDIVYQP 548
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 42 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRVVTVGRYRMLKD 221
G+D+ TTG L + C ++ +T S Y +N R+R VR+ + + +
Sbjct: 451 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRLGSDPKEELELF 510
Query: 222 MVSHKILKTKSEISALTDFLDWLEKEKGDGSVIL--IYHEP 338
V + T++E T L + E+GD IL I ++P
Sbjct: 511 AVYPQPTNTEAETEEAT--LRKIHLERGDPLPILEDIVYQP 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,065,623
Number of Sequences: 27780
Number of extensions: 333258
Number of successful extensions: 952
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -