Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E10
         (683 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16QY2 Cluster: Ribosomal protein S6 kinase, 90kD, poly...    34   3.7  
UniRef50_A4AYY6 Cluster: ABC-type hemin transport system, pemeas...    33   6.5  
UniRef50_A5KAQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_UPI000155C284 Cluster: PREDICTED: hypothetical protein;...    33   8.6  
UniRef50_UPI00015562C0 Cluster: PREDICTED: similar to poly(A) bi...    33   8.6  

>UniRef50_Q16QY2 Cluster: Ribosomal protein S6 kinase, 90kD,
           polypeptide; n=1; Aedes aegypti|Rep: Ribosomal protein
           S6 kinase, 90kD, polypeptide - Aedes aegypti
           (Yellowfever mosquito)
          Length = 1037

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
 Frame = +1

Query: 328 KPISDDKKEVELLKRCYENPLFIPXSEVLKD--------EIXGGGELMKSEAKKFENYTF 483
           +P    ++EVE LK C  +P  +   EVLKD        E+ GGGEL+     K  ++T 
Sbjct: 430 EPAEYARREVEALKECQGHPNIVKFVEVLKDSHHIYIVLELLGGGELL-HRINKTSSFTD 488

Query: 484 CEAVNDF 504
            +A + F
Sbjct: 489 SQARHYF 495


>UniRef50_A4AYY6 Cluster: ABC-type hemin transport system, pemease
           component; n=2; Alteromonadales|Rep: ABC-type hemin
           transport system, pemease component - Alteromonas
           macleodii 'Deep ecotype'
          Length = 378

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 682 GCLSAVXGAAPSHAARPTSTPPLLPTVCSRQDGGLFAIWLFGSSIGTLWAPLPLS 518
           G +    GAA + A   T  PPLLP +    +    A+W FG ++ ++W  L  S
Sbjct: 129 GLIGIAGGAAAAAALSMTIVPPLLPAL----ESVWVAMWAFGGALLSVWTVLRFS 179


>UniRef50_A5KAQ9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 802

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/65 (23%), Positives = 33/65 (50%)
 Frame = +1

Query: 313 LDETKKPISDDKKEVELLKRCYENPLFIPXSEVLKDEIXGGGELMKSEAKKFENYTFCEA 492
           +DE ++    +   +E +    +N +FIP + +  D +  G ++  S+ KK +  T+ + 
Sbjct: 652 VDEEEEEKEKNANIIENVYTFLKNNVFIPSNNIYTDFMENGNDIFLSKIKKSDKATYFKL 711

Query: 493 VNDFD 507
           +  FD
Sbjct: 712 IERFD 716


>UniRef50_UPI000155C284 Cluster: PREDICTED: hypothetical protein;
           n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein - Ornithorhynchus anatinus
          Length = 332

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -2

Query: 652 PSHAARPTSTPPLLPTVCSRQDGGLFAIWLFGSSIGTLWAP-LPLSXVRC 506
           P H+  P  TPPL P     Q GGLF  W  G     L  P LP +   C
Sbjct: 10  PHHSTHPPETPPLPPP----QSGGLFLEWRLGGLPQALTPPSLPSTPHSC 55


>UniRef50_UPI00015562C0 Cluster: PREDICTED: similar to poly(A)
           binding protein interacting protein 2; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           poly(A) binding protein interacting protein 2 -
           Ornithorhynchus anatinus
          Length = 196

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +1

Query: 205 SSGEKTPSIVIEDICGDEQCXVNDNYVITYPDSEGELDETKKPISDDKKEVELLKRCYEN 384
           S    +PSI+ ED+  +     +DN    Y   E E +E  + I ++  E E ++RC++ 
Sbjct: 5   SRSSASPSIINEDVIVNGHAHEDDNPFAEYMWMENE-EEFNRQIEEELWEEEFIERCFQE 63

Query: 385 PL 390
            L
Sbjct: 64  ML 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,048,337
Number of Sequences: 1657284
Number of extensions: 9728631
Number of successful extensions: 28546
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28523
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)