Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E10
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0193 + 32243458-32243556,32243566-32244273                       31   1.1  
07_01_0949 - 7988212-7989336                                           29   4.5  
08_01_1048 + 10624027-10624575,10625332-10625522,10626044-106265...    28   7.9  
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711     28   7.9  
01_01_0114 - 851249-852372,852577-852740,852838-853568                 28   7.9  

>03_06_0193 + 32243458-32243556,32243566-32244273
          Length = 268

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
 Frame = +1

Query: 238 EDI-CGDEQCXVNDNYVITYPDSEGELDETKKPISDDKKEVELL--KRCYENPLFIPXSE 408
           +DI C DE+  + +N      D E ELD+  + + DD  E   +  K C ENP       
Sbjct: 160 DDIECFDEEDGICENPDDEIFDDEEELDDDDESLDDDDIECYDVEDKICEENP------- 212

Query: 409 VLKDEIXGGGELMKSEAKKFENYTFCEAVNDFDIELXTGEAV 534
              DEI    E +  E    ++   CE+++D +IE    E +
Sbjct: 213 --DDEIFDDEEEIDCEEDLDDDDDDCESLDDDNIECFDAEDI 252


>07_01_0949 - 7988212-7989336
          Length = 374

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
 Frame = +1

Query: 262 CXVNDNYVITYPDSEGELDETKKPISDDKKEVELLKRCYENPLFIPXSEVLKDEIXGGGE 441
           C + D+  +  PD  G +D        D +  + ++ C    LF+P +E   + I GGG 
Sbjct: 266 CVMGDDSSLLLPDLPGMID--------DNEHQQFVRECDMPHLFVPQAE---EAIAGGGA 314

Query: 442 LMKSEAKKFENYTFCE----AVNDFDIELXTGEAVPIVYLSTS 558
                A   +N  F +    A++DF+      E +  +  STS
Sbjct: 315 ASAPSADN-QNCEFNDGEDMALSDFEFPESIDEVLSYIDFSTS 356


>08_01_1048 +
           10624027-10624575,10625332-10625522,10626044-10626539,
           10626664-10626749,10626853-10627033
          Length = 500

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 376 YENPLFIPXSEVLKDEIXGGGELMKSEAKKFENYTFCEAVNDFDI 510
           YEN LF P  ++L+D   G    + + A+  + Y  C+ V   D+
Sbjct: 118 YENVLFFPVVQLLRDRYPGVVVDVVASARGKQVYEMCKNVRYADV 162


>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
          Length = 372

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +1

Query: 217 KTPSIVIEDICGDEQCXVN---DNYVITYPDSEGELDETKKPISDDKKEVELLKRCYENP 387
           +T  I++++I  +E    N   D   I   D++ E+D+ ++  S  ++E+  +KR  E  
Sbjct: 196 QTRQILLQEIINEELLAANTASDEAAINGVDTDDEVDQAEEYESWRRREMARIKRIREES 255

Query: 388 LFIPXSEVLKDE 423
                  +++DE
Sbjct: 256 GIDDDKSIMEDE 267


>01_01_0114 - 851249-852372,852577-852740,852838-853568
          Length = 672

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 313 LDETKKPISDDKKEVELLKRCYENPLFIPXSEVLKD 420
           LD+ K+ +S  + E+EL    Y +  F+  S  +KD
Sbjct: 117 LDQYKRKVSGHRIEIELAPGAYNHAYFVRCSREVKD 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,138,849
Number of Sequences: 37544
Number of extensions: 271373
Number of successful extensions: 773
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)