Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E10
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           24   5.1  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   6.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.0  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 442 LMKSEAKKFENYTFCEAVNDFDIELXTGEAVPIVYL 549
           +M++ A K+ N T  E   DF+    T E    VYL
Sbjct: 63  IMEARANKWHNTTLDEIREDFEANGTTCELEEEVYL 98


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 298 DSEGELDETKKPISDDKKE 354
           DS+  +DE  +PISD ++E
Sbjct: 56  DSDFSIDENDEPISDAEEE 74


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 205  SSGEKTPSIVIEDICGDEQCXVNDN 279
            S GE++P I+ +D   +  C  ND+
Sbjct: 1474 SGGEESPGILSDDQPPESPCDSNDS 1498


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,173
Number of Sequences: 2352
Number of extensions: 10510
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)