Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E10
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z74038-1|CAA98497.2|  578|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U40030-4|AAS80338.1|  909|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U40030-3|AAS80339.1|  911|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81454-7|CAB76407.1|  378|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    28   5.4  

>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 424 IXGGGELMKSEAKKFENYTFCEAVNDFDIELXTGEAVPIV 543
           I GG E+   + +K   Y +C + +   +   TG  VPI+
Sbjct: 456 IFGGVEIKTHKDQKLTGYRYCSSADQNTVHRSTGSLVPII 495


>Z74038-1|CAA98497.2|  578|Caenorhabditis elegans Hypothetical
           protein F58B4.1a protein.
          Length = 578

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 424 IXGGGELMKSEAKKFENYTFCEAVNDFDIELXTGEAVPIV 543
           I GG E+   + +K   Y +C + +   +   TG  VPI+
Sbjct: 456 IFGGVEIKTHKDQKLTGYRYCSSADQNTVHRSTGSLVPII 495


>U40030-4|AAS80338.1|  909|Caenorhabditis elegans Hypothetical
           protein T13C2.6a protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 199 NXRTIVARHXIFRIPFXLCIYSNR-YHFDYDHYDXALNXXRFT 74
           N +T++  H   R PF + ++ +R ++ D++H D  +   +FT
Sbjct: 690 NIKTVLHSHQYLRHPFSMAVFEDRLFYTDWEH-DGVITVNKFT 731


>U40030-3|AAS80339.1|  911|Caenorhabditis elegans Hypothetical
           protein T13C2.6b protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 199 NXRTIVARHXIFRIPFXLCIYSNR-YHFDYDHYDXALNXXRFT 74
           N +T++  H   R PF + ++ +R ++ D++H D  +   +FT
Sbjct: 692 NIKTVLHSHQYLRHPFSMAVFEDRLFYTDWEH-DGVITVNKFT 733


>Z81454-7|CAB76407.1|  378|Caenorhabditis elegans Hypothetical
           protein B0391.11 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +1

Query: 109 GHNQSDIG*NKYTDXMECGKXNAGLRWSXYSSSSGEKTPSIVIEDI 246
           G NQ ++  N +++ ++C K +  +    +SS+ GE+    VIE +
Sbjct: 157 GGNQLELALNDFSNFLKCPKLHLKIFGVTFSSAVGEEARQKVIETV 202


>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = +1

Query: 292 YPDSEGELDETKKPISDDKKEVELLKRCYENPLFIPXSEVLKDEIXGGGELMKSEAKKFE 471
           Y   EG   + K+ + DDKK+ E  KR  E  L    +E+ KDE     E  K EA+K +
Sbjct: 23  YDKKEGLGMDQKEIVGDDKKDKEARKR--ERKLQDEFAELKKDE-----EKDKEEAEKEK 75

Query: 472 N 474
           N
Sbjct: 76  N 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,172,465
Number of Sequences: 27780
Number of extensions: 243688
Number of successful extensions: 727
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)