Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E09
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81531-6|CAB04317.2| 330|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 1.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 1.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 1.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 2.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 2.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 2.5
U80955-7|AAG01555.1| 116|Caenorhabditis elegans Hypothetical pr... 26 10.0
>Z81531-6|CAB04317.2| 330|Caenorhabditis elegans Hypothetical
protein F36D3.6 protein.
Length = 330
Score = 30.7 bits (66), Expect = 0.46
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 118 PYVVPLPYAATAGYPLSYVSSLSVPTV 198
P+V+ YAA AGYPL + L VPT+
Sbjct: 72 PFVI---YAAVAGYPLGVIVYLGVPTI 95
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 469 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 507
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 760 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 798
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 469 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 507
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 760 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 798
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 101 PARRPTRMWCLCRTLQLPATPFPTCHPYL----YLPSTA 205
PA R LC P+TPFPT P L +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 35 NLASDKLSKCLRRX*SQCWLSSPARRPTRMWCLCRTLQLPATPFPTCH--PYLYLPSTAL 208
N+ S S C + LS PAR T C R+ P P+C P + TA
Sbjct: 58 NMPSSSSSSCTSSDSEESELSLPARSRTPSVCAERSTTGDEEPVPSCSVVPDIVALQTAP 117
Query: 209 HSP 217
H P
Sbjct: 118 HYP 120
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 35 NLASDKLSKCLRRX*SQCWLSSPARRPTRMWCLCRTLQLPATPFPTCH--PYLYLPSTAL 208
N+ S S C + LS PAR T C R+ P P+C P + TA
Sbjct: 97 NMPSSSSSSCTSSDSEESELSLPARSRTPSVCAERSTTGDEEPVPSCSVVPDIVALQTAP 156
Query: 209 HSP 217
H P
Sbjct: 157 HYP 159
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 102 LRGGRPVC--GASAVRCNCRLPPFLRVILICTYRLQLCIHRLL 224
+R G+ C GA+ RC+ LP +LR+ R C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 102 LRGGRPVC--GASAVRCNCRLPPFLRVILICTYRLQLCIHRLL 224
+R G+ C GA+ RC+ LP +LR+ R C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 102 LRGGRPVC--GASAVRCNCRLPPFLRVILICTYRLQLCIHRLL 224
+R G+ C GA+ RC+ LP +LR+ R C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 102 LRGGRPVC--GASAVRCNCRLPPFLRVILICTYRLQLCIHRLL 224
+R G+ C GA+ RC+ LP +LR+ R C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>U80955-7|AAG01555.1| 116|Caenorhabditis elegans Hypothetical
protein T04C9.2 protein.
Length = 116
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 132 SAVRCNCRLPPFLRV 176
+A RC CR PPFL +
Sbjct: 35 AASRCRCRRPPFLSI 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,622,298
Number of Sequences: 27780
Number of extensions: 151767
Number of successful extensions: 447
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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