Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E05
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.32 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.2  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.2  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 349 PFIDSFSVATNPVYSMYASDFSQMVISVMDLTAFCGSTK 233
           PFI       NP   +Y  D S  VI+++D T   G+ K
Sbjct: 192 PFIVRVPEEDNPHAKLYDYDLSSHVITILDWTKEDGTDK 230



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 662 FV*NWFFTARR*CGNCSYN 718
           F+  W+ T  + C +C YN
Sbjct: 61  FLLEWYHTLSKACYDCPYN 79


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 153 TIMSNTANTIGDVKKSENI---HTLPPDHRFVEP 245
           +I+S   N  GD     +I   +   PDHRF+EP
Sbjct: 350 SILSPNRNYYGDFHNMGHILIGYIHDPDHRFLEP 383


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 594 FGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNV 701
           +G+  + DY     + FV     L  +GFL  ED+V
Sbjct: 127 YGSFYQPDYFIDKNIVFVNLNYRLGPLGFLSTEDDV 162


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 594 FGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNV 701
           +G+  + DY     + FV     L  +GFL  ED+V
Sbjct: 127 YGSFYQPDYFIDKNIVFVNLNYRLGPLGFLSTEDDV 162


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 594 FGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNV 701
           +G+  + DY     + FV     L  +GFL  ED+V
Sbjct: 127 YGSFYQPDYFIDKNIVFVNLNYRLGPLGFLSTEDDV 162


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 594 FGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNV 701
           +G+  + DY     + FV     L  +GFL  ED+V
Sbjct: 127 YGSFYQPDYFIDKNIVFVNLNYRLGPLGFLSTEDDV 162


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 594 FGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNV 701
           +G+  + DY     + FV     L  +GFL  ED+V
Sbjct: 127 YGSFYQPDYFIDKNIVFVNLNYRLGPLGFLSTEDDV 162


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 720 FNKYLNIARRLQ 755
           FNKYL  ARR++
Sbjct: 274 FNKYLTRARRIE 285


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 720 FNKYLNIARRLQ 755
           FNKYL  ARR++
Sbjct: 63  FNKYLTRARRIE 74


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 720 FNKYLNIARRLQ 755
           FNKYL  ARR++
Sbjct: 63  FNKYLTRARRIE 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,827
Number of Sequences: 336
Number of extensions: 4830
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)