Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_E05
(843 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.05 |||phosphotyrosyl phosphatase activator homolog|Schi... 109 5e-25
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 107 2e-24
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 28 1.4
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 28 1.9
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 27 2.5
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 27 3.3
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 3.3
SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces ... 27 3.3
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 7.7
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 26 7.7
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.7
>SPAC1782.05 |||phosphotyrosyl phosphatase activator
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 109 bits (262), Expect = 5e-25
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Frame = +3
Query: 228 HRFVEPQKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINM 407
+R P + + D+ ++++ +AY F+ L+E++K KP++ S +++ ++N+
Sbjct: 8 NRCFVPVRRILDNEDLKLFKEGDAYKLIDSFICDLDEAVKDKPISASIPQSSSIEHVLNI 67
Query: 408 LDKIDRIIDEFPPVEQP-QRFGNAAFREWFENVKTNSTQLLQEALQPELHLAIPEIKVYL 584
LD++ I E P ++ RFGN AF+ +++ V T L + E H A E Y
Sbjct: 68 LDRVGEIKQENPAIDNMGSRFGNPAFQSFYDQVYIE-TPKLHQVFGIE-HNAAMEAGRYF 125
Query: 585 QESFGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNKYLNIARRLQ 755
ESFGN RIDYG+GHE+ F+ +L L ++G D A V+ +F KY+ + R LQ
Sbjct: 126 YESFGNRKRIDYGSGHELYFMSWLLILKQLGIFTKNDYPALVVRVFVKYVELMRSLQ 182
Score = 47.2 bits (107), Expect = 3e-06
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1
Query: 763 YRMEPAGSHGVWSLXDYQFIPFIWGSS 843
Y +EPAGSHGVW L D+ F+PF++G++
Sbjct: 185 YTLEPAGSHGVWGLDDFHFLPFLFGAA 211
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 107 bits (257), Expect = 2e-24
Identities = 59/174 (33%), Positives = 92/174 (52%)
Frame = +3
Query: 231 RFVEPQKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINML 410
+F P+K + +DMT + +S+AY F+ LN + G + S V+K++ +L
Sbjct: 22 QFKTPEKLIVEASDMTAFRQSKAYYRIFDFLQRLNIASVGVN-DYHVEYSTRVEKLVRIL 80
Query: 411 DKIDRIIDEFPPVEQPQRFGNAAFREWFENVKTNSTQLLQEALQPELHLAIPEIKVYLQE 590
++ I PP RFGN AFR W E ++ +++Q++ + L A E+ Y
Sbjct: 81 CRVKEITKTVPPASGRHRFGNPAFRIWHEKLRDSASQIMDIIIPDSLSKAKVELLDYFLG 140
Query: 591 SFGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNKYLNIARRL 752
SFGN+ RID+GTGHE+ F+ F+ L +G L D A L I + YL + R L
Sbjct: 141 SFGNSQRIDFGTGHELNFLGFIKGLDLLGLLDAADYKAIALYITHVYLEVCREL 194
Score = 52.0 bits (119), Expect = 1e-07
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1
Query: 757 KTYRMEPAGSHGVWSLXDYQFIPFIWGSS 843
+TYR+EPAGSHGVW L D+ FIP+I+GS+
Sbjct: 196 QTYRLEPAGSHGVWGLDDHFFIPYIFGSA 224
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +1
Query: 433 MSSLQWNNLKDLVMLHSENGLKM*RQIPHSYFKKHYSQNYIW 558
+S + WNN +++ +E + ++P F+K + + Y W
Sbjct: 167 LSFISWNNFLEIIF--AEGKFSIEEEVPQLDFEKEFPRTYSW 206
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +3
Query: 279 IWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINMLDKIDRIIDEFPPVEQP 458
+W + + +Y F ++GK T + + N++++ +++ +D ++++FP V
Sbjct: 1477 VWHVNPKFTQYRLF------DVRGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFT 1530
Query: 459 QRFG 470
R G
Sbjct: 1531 GRIG 1534
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 486 EWFENVKTNSTQLLQEALQPELHLAIP 566
+WF+N + STQ L + + EL AIP
Sbjct: 624 DWFKNFQRYSTQKLASSFERELWEAIP 650
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 420 DRIIDEFPPVEQPQRFGNAAFREW-FENVKTNSTQLLQEALQPELHLAIPEIKVYLQES 593
+ I + P E+P GNA +W FE VK + + +L P+ + + K L S
Sbjct: 291 ETINNTLKPFEEPIAEGNADIEDWTFETVKKSDSTVLGNTSIPKNSIISSQNKEELPSS 349
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 295 SDFSQMVISVMDLTAFCGSTKRWSGG-RVWMFSLFFTSPIVFAVLDMIVMFXKSIYR 128
S+F I + DLT R S + +FSLF SP++ A+ M+ F K Y+
Sbjct: 1031 SNFLTWEIIISDLTRTYHLIPRGSSTVSIILFSLFLVSPLICALATMLA-FQKFFYQ 1086
>SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 372 KVSDNVKKIINMLDKIDRII 431
KV+D ++ I N+LDK++R+I
Sbjct: 213 KVADKIQLIDNLLDKVNRLI 232
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 191 HISNSICSVGHDCDVX*IYLSPLKQAC 111
H+ S C GH CD +PL+ +C
Sbjct: 740 HVCQSPCHAGHPCDERIPCKAPLEVSC 766
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 615 DYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNK 728
D+G + + +F C +YKI F + + N+ + FN+
Sbjct: 337 DHGPSYGLYLYLFFC-IYKIKFQKCDMNIVMLTKYFNE 373
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +3
Query: 246 QKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINMLDKIDR 425
+K +K+ D+ E S++Y E + L+E+ + + +KII ++D+
Sbjct: 349 EKFLKACKDLE--EVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDK 406
Query: 426 IIDEF 440
+IDE+
Sbjct: 407 MIDEY 411
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,637,147
Number of Sequences: 5004
Number of extensions: 76719
Number of successful extensions: 189
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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