Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E04
         (537 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   5.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.1  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 235 HQHHQTKNLHSSPLSAVFIFCMQXSL 158
           HQ H  +N+    LSA+   C   SL
Sbjct: 314 HQQHHQQNMSHEELSAMVNRCHPLSL 339


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 15  WFEXQLVYCGFSIVFYPR 68
           WF  +   CG   V YPR
Sbjct: 142 WFTSRTSACGLFSVCYPR 159


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 274 ITKL*HHGILQPSHQHHQ 221
           I  L H+G +Q    HHQ
Sbjct: 226 IDNLFHNGFMQEQSTHHQ 243


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 241 PSHQHHQTKNLHSSPLSA 188
           PSH +    N +SSP+S+
Sbjct: 124 PSHPYTVISNGYSSPMSS 141


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  NXENS*SHFGKLHGPMQFLRGRIF 142
           N EN+  +F  +H    FLR  IF
Sbjct: 360 NSENNLDNFYLIHTDTYFLRDIIF 383


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  NXENS*SHFGKLHGPMQFLRGRIF 142
           N EN+  +F  +H    FLR  IF
Sbjct: 362 NSENNLDNFYLIHTDTYFLRDIIF 385


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  NXENS*SHFGKLHGPMQFLRGRIF 142
           N EN+  +F  +H    FLR  IF
Sbjct: 360 NSENNLDNFYLIHTDTYFLRDIIF 383


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  NXENS*SHFGKLHGPMQFLRGRIF 142
           N EN+  +F  +H    FLR  IF
Sbjct: 362 NSENNLDNFYLIHTDTYFLRDIIF 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,687
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)