Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_E04
         (537 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-P...    29   3.0  
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot...    28   9.3  
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro...    28   9.3  
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA...    28   9.3  
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran...    28   9.3  

>AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-PA
            protein.
          Length = 1977

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -3

Query: 247  LQPSHQHHQTKNLHSSPLSAVFIFCMQXSLLQPLVEYSASQELHWSMKFTKVTSAILXIH 68
            L+  H H     LH S +S   +F +   ++Q L    +   ++W  KF    SA+   H
Sbjct: 1055 LETDHHHSFQLLLHDSQISLDKLFLICQCMMQLLSNELSDDSMNWYGKFFMQLSAVAKTH 1114


>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
           protein.
          Length = 1715

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 308 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 344


>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
           protein.
          Length = 1640

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 294 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 330


>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
           protein.
          Length = 1722

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 315 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 351


>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
           double-strand-specific ribonucleaseprotein.
          Length = 1722

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 127 ERQNILLMVVTGIXACKK*RLLIMEKNASFLFDDADD 237
           E  ++ LM  T +  C+K R L+++K     +DD DD
Sbjct: 315 ETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDD 351


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,623,095
Number of Sequences: 53049
Number of extensions: 337755
Number of successful extensions: 754
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)