Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D24
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784...    32   0.69 
09_06_0257 + 21891523-21891578,21891911-21892421,21893021-218930...    30   2.8  
09_04_0164 + 15265878-15268701,15268782-15269200                       30   2.8  
04_03_0631 - 18190195-18190686,18190866-18191066                       29   4.9  
01_01_0920 + 7264498-7264573,7264705-7264745,7265339-7265408,726...    29   6.4  
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437...    28   8.5  

>07_03_1769 +
           29377784-29377878,29377993-29378180,29378340-29378472,
           29378580-29378715,29378996-29379072,29379162-29380830,
           29380935-29381018,29381120-29381224,29381302-29381358
          Length = 847

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 21/65 (32%), Positives = 34/65 (52%)
 Frame = +3

Query: 609 GSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQDVYTWPRHHEL 788
           GSP P +H F+N++   E ++ SN     SP S  +++   I   TT  D  +  R+ EL
Sbjct: 233 GSPMPQMHNFQNETSSSELNISSN----CSPESSIKVTQD-IGASTTGTDSVSEERNLEL 287

Query: 789 QDCAS 803
           +  +S
Sbjct: 288 ERTSS 292


>09_06_0257 +
           21891523-21891578,21891911-21892421,21893021-21893092,
           21893571-21893875,21894085-21894196,21894514-21894750,
           21894933-21895640
          Length = 666

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 681 ELIDSSPTSIARISSTLIVTRTTSQDVYTWPRHHELQD 794
           +LI +  T +  IS  L   R   +D+  W RHH+L D
Sbjct: 346 QLIGNMQTYLQSISKRLEEWRLRQRDMEEWMRHHQLPD 383


>09_04_0164 + 15265878-15268701,15268782-15269200
          Length = 1080

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 633 WFKNDSPVYEYDVESNELIDSSPTSI 710
           W  N + +Y  DVE+N L D  PTSI
Sbjct: 307 WLANCTILYLLDVENNSLADDLPTSI 332


>04_03_0631 - 18190195-18190686,18190866-18191066
          Length = 230

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 579 TTIELTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD 758
           +T E    AAGS    + W K    V+ Y+     L+  + ++I   ++ +  +RT   D
Sbjct: 116 STAEAEYVAAGSCCAQLLWMKQTLKVFGYNFTKIPLLCDNESAIKIANNPVQHSRTKHID 175

Query: 759 VYTWPRHHELQD 794
           +    RHH L+D
Sbjct: 176 I----RHHFLRD 183


>01_01_0920 +
           7264498-7264573,7264705-7264745,7265339-7265408,
           7265500-7265648,7266143-7266238,7266326-7266396,
           7266510-7266571,7266651-7266714,7267608-7267692,
           7267777-7267903,7268016-7268080,7268739-7268796,
           7268927-7269066,7269624-7269693,7269910-7269981,
           7270188-7270234,7270468-7270566
          Length = 463

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +3

Query: 534 SITQGPLPSYAHTPGTTIELTC--EAAGSPAPSVHWFKNDSPVYE 662
           S  +GP P+  HT   T ++T     A S  P   W K+   +YE
Sbjct: 353 STERGPHPNIQHTENITQDMTARKHLAASVLPGAEWRKDGHLLYE 397


>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
            4378900-4378970,4379038-4379144,4379241-4379711,
            4379791-4379976,4380132-4380425,4380820-4381434,
            4382219-4382615,4382768-4382850,4383397-4383567,
            4384046-4384243,4384754-4385314,4385401-4385460,
            4385553-4385869,4385980-4386403,4386539-4387006,
            4387093-4387209,4387306-4387427,4387506-4388247,
            4388453-4388485,4388625-4388879,4388975-4389160,
            4390115-4390453,4391293-4392045
          Length = 3017

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
 Frame = +3

Query: 321  PEGALEFFLRESHQYYRAVV--RMHLVLLFTVAALLGSCQSAHLNKHIKLLSDIDN---- 482
            P  A  FFL+ +      +    +H +LL ++  L G+  ++     + LL DI+     
Sbjct: 2206 PLQAGSFFLKHAEAVGEEIPARELHEILLLSLQWLSGTMTNSSPVYPLHLLRDIETRVWL 2265

Query: 483  -SIENGVQAKSDGSHKYLSITQ 545
             ++E+  Q K+DG +   S+TQ
Sbjct: 2266 LAVESESQCKADGEYAPSSVTQ 2287


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,939,036
Number of Sequences: 37544
Number of extensions: 412848
Number of successful extensions: 987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)