Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D24
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.008
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.008
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.011
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 28 0.13
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.23
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 8.5
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.008
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 573 PGTTIELTCEAAGSPAPSVHW 635
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 25.8 bits (54), Expect = 0.52
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 552 LPSYAHTPGTTIELTCEAAGSPAPSVHW 635
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 585 IELTCEAAGSPAPSVHWFK 641
+ L C+A G P P++ W K
Sbjct: 727 VALHCQAQGVPTPTIVWKK 745
Score = 22.6 bits (46), Expect = 4.9
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 510 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 647
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.008
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 573 PGTTIELTCEAAGSPAPSVHW 635
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 25.8 bits (54), Expect = 0.52
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 552 LPSYAHTPGTTIELTCEAAGSPAPSVHW 635
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 585 IELTCEAAGSPAPSVHWFK 641
+ L C+A G P P++ W K
Sbjct: 723 VALHCQAQGVPTPTIVWKK 741
Score = 22.6 bits (46), Expect = 4.9
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 510 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 647
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.011
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 591 LTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 716
+ C AG P P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
Score = 23.8 bits (49), Expect = 2.1
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 591 LTCEAAGSPAPSVHWFKNDSPVYEYDV-ESNELIDSSPTSIARISSTLIVTRTTSQDVYT 767
L A + SV +K+ ++ V ES + S+ S++ I + ++ Y
Sbjct: 13 LLLSIASTYVVSVAGYKHSRRHRDFTVAESYDASSSNSDSLSMTIPPSIDRSSIHEESYL 72
Query: 768 WPRHHELQDCASQHCGL 818
+ CAS++CG+
Sbjct: 73 AESSRSIDPCASKYCGI 89
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.9 bits (59), Expect = 0.13
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 573 PGTTIELTCEAAGSPAPSVHW 635
PG ++ L C A+G+P P + W
Sbjct: 407 PGPSMFLKCVASGNPTPEITW 427
Score = 26.6 bits (56), Expect = 0.30
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 576 GTTIELTCEAAGSPAPSVHWFKND 647
GT + C+A G+P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 576 GTTIELTCEAAGSPAPSVHWFKNDSPV 656
G TC G+P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 25.0 bits (52), Expect = 0.91
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 564 AHTPGTTIELTCEAAGSPAPSVHWFK--NDSP 653
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 585 IELTCEAAGSPAPSVHW 635
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
Score = 23.8 bits (49), Expect = 2.1
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 585 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD 758
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVED 281
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.1 bits (57), Expect = 0.23
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 576 GTTIELTCEAAGSPAPSVHWFKNDSPVYEY 665
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 8.5
Identities = 13/64 (20%), Positives = 27/64 (42%)
Frame = +3
Query: 597 CEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQDVYTWPR 776
C+ + W K + E + L + + +ST + T TTS++ +P
Sbjct: 25 CQPTQRTMSKIQWRKPKPAMVEEKTQLRYLEELNALRTELGASTKLATDTTSENEENYP- 83
Query: 777 HHEL 788
H+++
Sbjct: 84 HYQM 87
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,141
Number of Sequences: 438
Number of extensions: 4405
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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