Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D21
(837 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 456 e-127
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 262 8e-69
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 261 2e-68
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 256 7e-67
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 256 7e-67
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 250 2e-65
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 249 8e-65
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 244 2e-63
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 237 3e-61
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 229 5e-59
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 228 2e-58
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 223 6e-57
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 223 6e-57
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 221 2e-56
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 220 4e-56
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 220 4e-56
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 208 1e-52
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 206 4e-52
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 203 5e-51
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 202 7e-51
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 200 3e-50
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 199 6e-50
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 199 6e-50
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 197 2e-49
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 190 3e-47
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 190 4e-47
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 189 7e-47
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 186 6e-46
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 185 1e-45
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 183 6e-45
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 163 6e-39
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 154 3e-36
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 142 1e-32
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 137 3e-31
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 128 1e-28
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 124 3e-27
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 123 6e-27
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 87 5e-16
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 83 6e-15
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 81 3e-14
UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein ... 50 8e-07
UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein ... 54 6e-06
UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina... 53 8e-06
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 35 5e-05
UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonucleas... 50 1e-04
UniRef50_A5YS39 Cluster: DNA double-strand break repair protein ... 49 1e-04
UniRef50_O29231 Cluster: DNA double-strand break repair protein ... 49 1e-04
UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein ... 45 2e-04
UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1; ... 47 5e-04
UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphag... 47 7e-04
UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family prot... 46 9e-04
UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=... 46 9e-04
UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1; Methanococ... 46 9e-04
UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus elo... 44 0.005
UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia intestin... 44 0.005
UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein ... 44 0.005
UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein ... 44 0.006
UniRef50_P62131 Cluster: DNA double-strand break repair protein ... 36 0.013
UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.019
UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4; Lactobacil... 42 0.025
UniRef50_O26641 Cluster: DNA double-strand break repair protein ... 42 0.025
UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1; A... 41 0.033
UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=... 41 0.033
UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein ... 41 0.033
UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6; S... 41 0.044
UniRef50_A6UUX3 Cluster: Metallophosphoesterase; n=1; Methanococ... 40 0.059
UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein ... 40 0.059
UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter... 40 0.077
UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeu... 40 0.077
UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n... 40 0.10
UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2; Lactobacillales|... 40 0.10
UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus... 40 0.10
UniRef50_A5UJE8 Cluster: DNA repair exonuclease (SbcD/Mre11-fami... 40 0.10
UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1; Fervidobac... 39 0.14
UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Re... 39 0.18
UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1; Halothermo... 39 0.18
UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3; Clostri... 39 0.18
UniRef50_A3H5S8 Cluster: Metallophosphoesterase; n=1; Caldivirga... 39 0.18
UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1; Ign... 38 0.24
UniRef50_Q5XUC9 Cluster: Zona pellucida C related protein; n=4; ... 38 0.24
UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix ... 38 0.24
UniRef50_Q897Z1 Cluster: Exonuclease sbcD; n=2; Clostridium|Rep:... 38 0.31
UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1; Symbiobact... 38 0.31
UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1; Metallosph... 38 0.31
UniRef50_Q3ICS5 Cluster: Exonuclease sbcCD subunit D; n=2; Alter... 38 0.41
UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein; ... 38 0.41
UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1; Anaerom... 38 0.41
UniRef50_A6Q875 Cluster: DNA double-strand break repair protein;... 38 0.41
UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1; ... 38 0.41
UniRef50_Q8TNC7 Cluster: Phosphoesterase; n=2; Methanosarcina|Re... 38 0.41
UniRef50_Q2B178 Cluster: DNA repair exonuclease family protein; ... 32 0.53
UniRef50_Q8Y6N8 Cluster: Lmo1646 protein; n=12; Listeria|Rep: Lm... 37 0.55
UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1; Clostri... 37 0.55
UniRef50_A0LM47 Cluster: Nuclease SbcCD, D subunit; n=1; Syntrop... 37 0.55
UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2; Thermoplasmata... 37 0.55
UniRef50_P62132 Cluster: DNA double-strand break repair protein ... 37 0.55
UniRef50_A5ZTK8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.72
UniRef50_A1S175 Cluster: Metallophosphoesterase precursor; n=1; ... 29 0.88
UniRef50_Q830T2 Cluster: Exonuclease SbcD; n=3; Lactobacillales|... 36 0.95
UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=... 36 0.95
UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella t... 36 0.95
UniRef50_Q3ADJ2 Cluster: Ser/Thr protein phosphatase family prot... 36 1.3
UniRef50_A0P1W8 Cluster: Putative DNA repair exonuclease; n=1; S... 36 1.3
UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3; Thermotoga|... 36 1.7
UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=... 36 1.7
UniRef50_Q3W6X0 Cluster: Exonuclease SbcD; n=3; Actinomycetales|... 36 1.7
UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus... 36 1.7
UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus thermoph... 35 2.2
UniRef50_A5EW10 Cluster: Exonuclease SbcD; n=1; Dichelobacter no... 35 2.2
UniRef50_A1R7R7 Cluster: Putative nuclease SbcCD, D subunit; n=1... 35 2.2
UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilu... 35 2.2
UniRef50_A4J7M8 Cluster: Metallophosphoesterase; n=1; Desulfotom... 32 2.6
UniRef50_UPI00015C5C4B Cluster: hypothetical protein CKO_02773; ... 35 2.9
UniRef50_Q9RT45 Cluster: Exonuclease SbcD, putative; n=2; Deinoc... 35 2.9
UniRef50_Q8EP66 Cluster: Exonuclease; n=13; Bacillaceae|Rep: Exo... 35 2.9
UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative ... 35 2.9
UniRef50_Q5P494 Cluster: Exonuclease SbcD; n=1; Azoarcus sp. EbN... 35 2.9
UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1; ... 35 2.9
UniRef50_A5WEF9 Cluster: Nuclease SbcCD, D subunit; n=3; Psychro... 35 2.9
UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3; ... 35 2.9
UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillu... 34 3.8
UniRef50_Q2IN32 Cluster: Nuclease SbcCD, D subunit; n=2; Myxococ... 34 3.8
UniRef50_Q1NCL0 Cluster: Nuclease SbcCD, D subunit; n=1; Sphingo... 34 3.8
UniRef50_A5IKC9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A3WLK0 Cluster: Exonuclease SbcD, putative; n=1; Idioma... 34 3.8
UniRef50_Q54NN5 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A2F419 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A6CK39 Cluster: Exonuclease; n=3; Bacillaceae|Rep: Exon... 29 4.5
UniRef50_Q03QD8 Cluster: DNA repair exonuclease; n=1; Lactobacil... 34 5.1
UniRef50_A6WB40 Cluster: Metallophosphoesterase; n=1; Kineococcu... 34 5.1
UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16; Staphyloc... 34 5.1
UniRef50_A1SK69 Cluster: Nuclease SbcCD, D subunit; n=2; Actinom... 34 5.1
UniRef50_A1K1W1 Cluster: Exonuclease SbcD, putative; n=4; Betapr... 34 5.1
UniRef50_Q552H6 Cluster: Putative uncharacterized protein; n=2; ... 34 5.1
UniRef50_Q3IPC0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q1VZW8 Cluster: Exonuclease SbcD; n=1; Psychroflexus to... 33 6.7
UniRef50_A7DFW6 Cluster: Nuclease SbcCD, D subunit; n=3; Alphapr... 33 6.7
UniRef50_A3YYZ0 Cluster: Putative exonuclease; n=1; Synechococcu... 33 6.7
UniRef50_A3I3N6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q23MC1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A0BB93 Cluster: Chromosome undetermined scaffold_1, who... 33 6.7
UniRef50_Q2K465 Cluster: Putative sensory box/GGDEF family prote... 33 8.9
UniRef50_A5VL00 Cluster: Metallophosphoesterase; n=2; Lactobacil... 33 8.9
UniRef50_A5KQM8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_A3S327 Cluster: Possible general (Type II) secretion pa... 33 8.9
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 456 bits (1124), Expect = e-127
Identities = 215/215 (100%), Positives = 215/215 (100%)
Frame = +3
Query: 156 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 335
MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG
Sbjct: 1 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 60
Query: 336 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 515
GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI
Sbjct: 61 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 120
Query: 516 LSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLS 695
LSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLS
Sbjct: 121 LSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLS 180
Query: 696 HLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
HLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ
Sbjct: 181 HLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 215
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 262 bits (642), Expect = 8e-69
Identities = 118/208 (56%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Frame = +3
Query: 183 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
S +T RIL+A+D+HLG+ N+ +R D+F FEE+L +A + VD ILLGGDLF +A+P
Sbjct: 4 SEANTFRILLATDLHLGYGLNNSIRENDTFRTFEEILQIANKEKVDFILLGGDLFHEARP 63
Query: 363 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF--SRTVNYEDPNLNISYPILSIHGNH 536
+ +C+ K E+IRKYC GDKPV IE SD +F + +VNYEDPN+N+S PI SIHGNH
Sbjct: 64 TPHCIKKTIELIRKYCFGDKPVEIEFFSDPSLHFPGNASVNYEDPNINVSIPIFSIHGNH 123
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
DDP G+ VS+LD+ S GLVNYFG+W D T V I+P+LL+KG ++LALYGLSH++D+RL
Sbjct: 124 DDPTGKNHVSALDLFSSMGLVNYFGRWDDVTKVEINPILLKKGDSKLALYGLSHIRDERL 183
Query: 717 SRLFAEKKVEMERPDETLDWFNLFVLHQ 800
+RLF +KKV + P++ DWFN+F+LHQ
Sbjct: 184 ARLFLDKKVVTKTPEDLNDWFNVFILHQ 211
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 261 bits (639), Expect = 2e-68
Identities = 128/220 (58%), Positives = 163/220 (74%), Gaps = 16/220 (7%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGDLF A PS
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAVPSQ 71
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISYPILSIHGNH 536
N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+ P+ SIHGNH
Sbjct: 72 NALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIHGNH 131
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
DDP G G +SSLD+LS +GLVNYFG+WTD T V ISPVL++KG ++LALYGLSH+ D RL
Sbjct: 132 DDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRL 191
Query: 717 SRLFAEKKVEMERPD------------ETLDWFNLFVLHQ 800
+RL + KV+ P+ E DWF+L V+HQ
Sbjct: 192 ARLIKDFKVKFNCPENVANGEDGNESKEEEDWFHLLVVHQ 231
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 256 bits (626), Expect = 7e-67
Identities = 123/224 (54%), Positives = 158/224 (70%), Gaps = 6/224 (2%)
Frame = +3
Query: 147 SKIMIENDISAWSPDDTLRILIASDIHLGFMENDP--VRGEDSFIAFEEVLSLAVQCDVD 320
S I N +PDD+++ILIA+DIHLGF N + EDSFI FEE+L + +VD
Sbjct: 2 SSTPINNKNEKRNPDDSIKILIATDIHLGFEYNKKRGQQSEDSFITFEEILQYGKEYEVD 61
Query: 321 LILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYED 488
ILLGGDLF KPS + +C E++RKYCLG K + I+ LSD F +TVNYED
Sbjct: 62 FILLGGDLFHDTKPSQTAILRCMELLRKYCLGTKEIKIQFLSDPEVIFRHCAYKTVNYED 121
Query: 489 PNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGL 668
PNLNIS PI SIHGNHDDP G++ S+D+LS++GL+NYFGKWTD T + I P++++KG
Sbjct: 122 PNLNISMPIFSIHGNHDDP-SFGAIGSMDLLSVSGLINYFGKWTDLTKINIPPLIIKKGE 180
Query: 669 TRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
T +ALYGLS++ DQRLSRL + K++M RP E D FN+FVLHQ
Sbjct: 181 THIALYGLSYINDQRLSRLLRDFKIDMLRPTEITDCFNIFVLHQ 224
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 256 bits (626), Expect = 7e-67
Identities = 115/205 (56%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+RIL+A+D HLG++E DP+RG+DSF +FEE+L A VD++LLGGDLF KPS +C+
Sbjct: 43 MRILVATDNHLGYLERDPIRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHDNKPSRSCL 102
Query: 378 FKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGNHDDPV 548
++ E+ RKYCLGD PV I+ LSDQ NFS TVNYEDPN NIS PI SIHGNHDDP
Sbjct: 103 YRTMELFRKYCLGDSPVRIQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIHGNHDDPT 162
Query: 549 GQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLF 728
G+G +++LD+LS++ LVNYFGK D + + P+LL KG T++A+YGL +++D+RL R F
Sbjct: 163 GEGGLAALDLLSVSNLVNYFGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRDERLHRTF 222
Query: 729 AEKKVEMERPDETLD-WFNLFVLHQ 800
++ V++ RP E+ D WFN+ VLHQ
Sbjct: 223 QKQSVKLMRPVESKDEWFNILVLHQ 247
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 250 bits (613), Expect = 2e-65
Identities = 116/208 (55%), Positives = 152/208 (73%), Gaps = 4/208 (1%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
++ +++LIA+DIHLG+ E R +DSF FEE+L A +VD++LLGGDLF +AKP
Sbjct: 34 ENIMKVLIATDIHLGY-EQTTKREDDSFRTFEEILQYARDHEVDMVLLGGDLFHEAKPPH 92
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILSIHGNH 536
N + KC E++R YCL DKPV I+ L+D FS + VN+EDPNLN+ P+ SIHGNH
Sbjct: 93 NVVMKCLELLRTYCLNDKPVKIQFLTDPEAVFSHCAQKVVNFEDPNLNVGIPVFSIHGNH 152
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
DDP G G+V S+D+LS TGL+NYFGKWTD T V I+P+L++KG+T +ALYGLS++ DQRL
Sbjct: 153 DDPTGYGAVGSMDVLSATGLINYFGKWTDVTQVSIAPLLIRKGVTTIALYGLSYMNDQRL 212
Query: 717 SRLFAEKKVEMERPDETLDWFNLFVLHQ 800
SRL K M R D+ D FN+FVLHQ
Sbjct: 213 SRLMRNNKFHMLRTDKADDPFNIFVLHQ 240
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 249 bits (609), Expect = 8e-65
Identities = 118/213 (55%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Frame = +3
Query: 177 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 356
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 357 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 524
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 525 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 704
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 705 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQ 800
D+RL R+F KKV M RP E + WFNLFV+HQ
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQ 218
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 244 bits (598), Expect = 2e-63
Identities = 114/208 (54%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+TL ILIA+D+HLG+ E D VRG DSF+ FEE L +A + +VD ILLGGDL+ + KPS
Sbjct: 49 NTLSILIATDVHLGYAEKDQVRGNDSFVTFEETLQIAKKRNVDFILLGGDLYHENKPSRR 108
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNHD 539
+ + RK+C+GD+ +E LSDQ NF+ VNYEDPNLN+S P+ SIHGNHD
Sbjct: 109 TLHASMALFRKFCMGDRVCEVEFLSDQSINFANNRFPWVNYEDPNLNVSIPVFSIHGNHD 168
Query: 540 DPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLS 719
DP G+G++ +LD+LS+ GLVNYFG+ + +SP+LLQKG T+LALYGL ++D+RL
Sbjct: 169 DPAGEGNLCALDLLSVCGLVNYFGRPASVDDITVSPLLLQKGATKLALYGLGSVRDERLH 228
Query: 720 RLFAEKKVEMERPDETLD-WFNLFVLHQ 800
R F KV+M RP E D WFN FVLHQ
Sbjct: 229 RTFVNNKVKMLRPKEDPDSWFNAFVLHQ 256
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 237 bits (579), Expect = 3e-61
Identities = 110/209 (52%), Positives = 149/209 (71%), Gaps = 5/209 (2%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
++T+RILI+SD H+G+ E DPVRG DSF++F E+L +A + DVD+ILLGGD+F KPS
Sbjct: 15 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSR 74
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 536
+++ +R CLGDKP +ELLSD T +NY DPN+N++ P+ SIHGNH
Sbjct: 75 KALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNH 134
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
DDP G G S+LDIL +TGLVNYFG+ + ++ +SP+LLQKG T+LALYG+S+++D+RL
Sbjct: 135 DDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVRDERL 194
Query: 717 SRLFAEKKVEMERPDETLD-WFNLFVLHQ 800
F E KV+ RPD D WFNL +HQ
Sbjct: 195 YHSFRENKVKFLRPDLYRDEWFNLLTVHQ 223
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 229 bits (561), Expect = 5e-59
Identities = 104/207 (50%), Positives = 152/207 (73%), Gaps = 4/207 (1%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+T+RIL+A+D H+G+ E DP+RG+DS+ +F EV+ LA + DVD++LL GDLF + KPS
Sbjct: 25 ETIRILVATDNHVGYNERDPIRGDDSWKSFHEVMCLARERDVDMVLLAGDLFHENKPSRK 84
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 542
M++ IR CLGDKP +E+LSD +NF VNYED ++N++ PI SIHGNHDD
Sbjct: 85 SMYQVMRSIRMNCLGDKPCELEMLSDASENFQGAFNHVNYEDLDINVAIPIFSIHGNHDD 144
Query: 543 PVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSR 722
P G+G +++LD+L ++GL+NY+G+ + ++ I PVLLQKG T+LALYG+S+++D+RL R
Sbjct: 145 PSGEGHLAALDLLQVSGLLNYYGRTPESDNIHIKPVLLQKGRTKLALYGMSNVRDERLFR 204
Query: 723 LFAEKKVEMERPD-ETLDWFNLFVLHQ 800
F + KV+ +P + DWFNL +HQ
Sbjct: 205 TFRDGKVKFYQPSIQKNDWFNLMCVHQ 231
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 228 bits (557), Expect = 2e-58
Identities = 102/207 (49%), Positives = 146/207 (70%), Gaps = 4/207 (1%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
DT+RIL+++D H+G+ E PVR +DS+ F+E++ +A + DVD++LLGGDLF + KPS
Sbjct: 28 DTIRILVSTDNHVGYAERHPVRKDDSWRTFDEIMQIAKKQDVDMVLLGGDLFHENKPSRK 87
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 542
M++ +RK+CLG KP +E LSD + F VNYEDP++N++ P+ SIHGNHDD
Sbjct: 88 SMYQVMRSLRKHCLGMKPCELEFLSDAAEVFEGAFPFVNYEDPDINVAIPVFSIHGNHDD 147
Query: 543 PVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSR 722
P G G SLD+L GLVNYFG+ + ++ + P+LLQKG T++ALYGLS+++D+R+ R
Sbjct: 148 PSGDGHYCSLDLLQAAGLVNYFGRVPEADNIHVKPILLQKGRTKMALYGLSNVRDERMHR 207
Query: 723 LFAEKKVEMERPDETL-DWFNLFVLHQ 800
F + KV RP++ DWFNL LHQ
Sbjct: 208 TFRDNKVRFYRPNQQKNDWFNLLALHQ 234
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 223 bits (544), Expect = 6e-57
Identities = 104/210 (49%), Positives = 146/210 (69%), Gaps = 4/210 (1%)
Frame = +3
Query: 183 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
S DT+RILI +D H+G+ ENDP+RG+DS+ FEE+ S+A + DVD+IL GGDLF KP
Sbjct: 9 SGPDTIRILITTDNHVGYNENDPIRGDDSWKTFEEITSIAKEKDVDMILQGGDLFHINKP 68
Query: 363 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGN 533
S M+K + +R CLGD+P +ELL D + TVNYEDPN+NIS P+ +I GN
Sbjct: 69 SKKSMYKVIKSLRTNCLGDRPCELELLGDPSMALGKDVDTVNYEDPNINISVPVFAISGN 128
Query: 534 HDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQR 713
HDD G+G + LD+LS +GL+N+FGK + + +SP++ QKG ++LALYGL++++D+R
Sbjct: 129 HDDATGEGFLLPLDLLSASGLINHFGKVPNNEELTVSPLIFQKGASKLALYGLANVRDER 188
Query: 714 LSRLFAEKKVEMERPDETLD-WFNLFVLHQ 800
L RLF + V+ RP D WFN+ +HQ
Sbjct: 189 LHRLFRDGNVKFLRPSSQADEWFNILCVHQ 218
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 223 bits (544), Expect = 6e-57
Identities = 102/209 (48%), Positives = 147/209 (70%), Gaps = 6/209 (2%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
DTL+IL+ +D H+G++ENDP+RG+DS+ F+E+ LA DVD+I+ GGDLF KP+
Sbjct: 12 DTLKILLTTDNHVGYLENDPIRGDDSWKTFDEITRLARDHDVDMIIQGGDLFHINKPTKK 71
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGNHDD 542
M+ + +R C+GD+P +ELLS+ + S VNYEDPNLNIS P+ +I+GNHDD
Sbjct: 72 SMYHVMKSLRANCMGDRPCELELLSEPGETMSNGFDEVNYEDPNLNISVPVFAINGNHDD 131
Query: 543 PVGQGSVSSLDILSITGLVNYFGKWTDYTH--VRISPVLLQKGLTRLALYGLSHLKDQRL 716
G+G +S+LD+L+++GL+NYFGK D H + P+LLQKG T+ ALYG+S+++D++L
Sbjct: 132 ATGEGMLSALDVLAVSGLINYFGKTRDNNHDTYLVKPILLQKGSTKFALYGMSNVRDEKL 191
Query: 717 SRLFAEKKVEMERPD-ETLDWFNLFVLHQ 800
RLF + +V ERP T +WFN HQ
Sbjct: 192 HRLFRDGEVRFERPGLHTDEWFNFLAFHQ 220
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 221 bits (540), Expect = 2e-56
Identities = 106/216 (49%), Positives = 147/216 (68%), Gaps = 13/216 (6%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
DTLR+L+A+D HLG+ME D +R DSF AFEE+ S+A + VD +LLGGDLF + KPS
Sbjct: 8 DTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHENKPSRT 67
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 542
+ K EI+R++CL DKPV +++SDQ NF VNYEDP+ N+ P+ SIHGNHDD
Sbjct: 68 TLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIHGNHDD 127
Query: 543 PVGQGSVSSLDILSITGLVNYFGKW----TDYTHVRISPVLLQKGLTRLALYGLSHLKDQ 710
P G ++S++DILS LVNYFGK + + + P+L++KG T +ALYGL +++D+
Sbjct: 128 PAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQITLYPILMKKGSTTVALYGLGNIRDE 187
Query: 711 RLSRLF-AEKKVEMERPD-----ETLDWFNLFVLHQ 800
RL+R+F V+ RP+ + DWFN+ VLHQ
Sbjct: 188 RLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQ 223
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 220 bits (537), Expect = 4e-56
Identities = 118/240 (49%), Positives = 157/240 (65%), Gaps = 31/240 (12%)
Frame = +3
Query: 174 SAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 353
+A S DD ++I++A+D H+G+ME DPVRG+DS FEE+L LAVQ DVDLILLGGDLF +
Sbjct: 103 AAQSEDDHIKIMLATDNHIGYMERDPVRGQDSIRTFEEILQLAVQHDVDLILLGGDLFHE 162
Query: 354 AKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQI------KNFSRTVNYEDPNLNISYPI 515
KPS + + + ++R+Y LGDKP+S+ELLSD K F +NYEDPNLN++ P+
Sbjct: 163 NKPSRDTLHQTMALLRQYTLGDKPISVELLSDPNDGALPGKRFP-AINYEDPNLNVAIPV 221
Query: 516 LSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKWT---------------------D 623
SIHGNHDDP G G++S+LD+LS++GL+NYFGK
Sbjct: 222 FSIHGNHDDPQGVGETGALSALDLLSVSGLINYFGKIELPSDDAAAGAPAARTARGGAFQ 281
Query: 624 YTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQ 800
+RI PVLLQKG TRLALYG+ ++KD+R+ +V M RP E D WFN+ +HQ
Sbjct: 282 EKGIRIKPVLLQKGETRLALYGMGNIKDERMHFELRANRVRMYRPQEEPDSWFNILCVHQ 341
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 220 bits (537), Expect = 4e-56
Identities = 104/227 (45%), Positives = 154/227 (67%), Gaps = 16/227 (7%)
Frame = +3
Query: 168 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 347
+I P+DT++IL+A+D H+G++E DP+RG+DS F E+L LAV+ +VD ILL GDLF
Sbjct: 13 NIETADPEDTIKILLATDNHIGYLERDPIRGQDSINTFREILQLAVKNEVDFILLAGDLF 72
Query: 348 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD----QIKNFS-RTVNYEDPNLNISYP 512
+ KPS +C+++ ++R+Y LGDKP+ +ELLSD + FS +NYEDPN NIS P
Sbjct: 73 HENKPSRDCLYQTLALLREYTLGDKPIQVELLSDPDEGKAAGFSFPAINYEDPNFNISIP 132
Query: 513 ILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKW--------TDYTHVRISPVLLQ 659
+ SIHGNHDDP G G++ +LD+LS++GL+NY GK+ T + + PVLL+
Sbjct: 133 VFSIHGNHDDPQGPGVNGALCALDVLSVSGLLNYMGKFDLPTSDADAATTGIAVRPVLLR 192
Query: 660 KGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
KG T+L +YG+ ++KDQR+ +V M P + +WFN+ ++HQ
Sbjct: 193 KGSTKLGMYGVGNVKDQRMHFELRSNRVRMYMPKDKDEWFNILLVHQ 239
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 208 bits (509), Expect = 1e-52
Identities = 102/220 (46%), Positives = 143/220 (65%), Gaps = 10/220 (4%)
Frame = +3
Query: 174 SAWSPDDT--LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 347
++W ++ LRIL+A+D HLG++E D +R DSF FEE+ SLAV VD ILLGG+LF
Sbjct: 6 ASWDEEENSMLRILVATDCHLGYLEKDEIRRFDSFDTFEEICSLAVINKVDFILLGGNLF 65
Query: 348 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYPIL 518
+ KPS++ + K EIIR YCL D V +++SDQ ++N VN+EDPN NI P+
Sbjct: 66 HENKPSISTLVKSMEIIRSYCLNDHQVQFQVVSDQAACLQNRFGRVNFEDPNFNIGLPVF 125
Query: 519 SIHGNHDDPVGQGSVSSLDILSITGLVNYFGK----WTDYTHVRISPVLLQKGLTRLALY 686
++HG HD P G +S+ DILS VNYFGK +D + + PV ++KG T +ALY
Sbjct: 126 TVHGTHDGPAGVDGLSATDILSACNFVNYFGKVDPGSSDVDQISVCPVFIKKGATSVALY 185
Query: 687 GLSHLKDQRLSRLF-AEKKVEMERPDETLDWFNLFVLHQK 803
GL +++D++LSR+ K++ + D DWFNLFV HQK
Sbjct: 186 GLGNIRDEKLSRMLQTHYKIQWMKADSEDDWFNLFVFHQK 225
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 206 bits (504), Expect = 4e-52
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 7/209 (3%)
Frame = +3
Query: 195 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQAKPSVN 371
T + L+ +D HLGF E DP RG+DSF FEEVL A + DVD +LLGGDLF + KPS+
Sbjct: 5 TFKFLLTTDNHLGFAERDPRRGDDSFTTFEEVLRAARTEHDVDAMLLGGDLFHENKPSLG 64
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYPILSIHGNHD 539
C+ + + RKY G+K V LLSD NF N++DPN+N++ P+ +IHGNHD
Sbjct: 65 CLVRACSLFRKYVFGNKTVPFSLLSDAATNFPTHALPMANFQDPNINVALPVFAIHGNHD 124
Query: 540 DPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLS 719
DPVG SSLD+L+ G +NYFG T + + PVLL+KG T +ALYGL +++D+RL
Sbjct: 125 DPVG--GTSSLDLLATNGYLNYFGHVTSLDDIILEPVLLRKGSTFIALYGLGNVRDERLH 182
Query: 720 RLFAEKKVEM--ERPDETLDWFNLFVLHQ 800
R F KKV++ +P WFN+ VLHQ
Sbjct: 183 RCFRLKKVQLVYPKPVPGRKWFNILVLHQ 211
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 203 bits (495), Expect = 5e-51
Identities = 100/209 (47%), Positives = 134/209 (64%), Gaps = 7/209 (3%)
Frame = +3
Query: 195 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQAKPSVN 371
T + L+ SD HLG+ E D RG+DSF FEE L A ++ +VD ILL GD F KPS+
Sbjct: 37 TFKFLVTSDNHLGYQERDSRRGDDSFTTFEECLRAARLEHEVDAILLAGDFFHDNKPSLG 96
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYPILSIHGNHD 539
C+ + + ++R Y LGDKP+S LLSD +NF N++DPN+N++ PI IHGNHD
Sbjct: 97 CLARTSSLLRSYVLGDKPISFTLLSDPKRNFPTHPVPLANFQDPNINVALPIFMIHGNHD 156
Query: 540 DPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLS 719
DPVG SS+DILS GLVNYFG + + + PVLL+KG T +ALYGL +++D RL
Sbjct: 157 DPVG--GTSSIDILSTAGLVNYFGHTSSLDDIVVEPVLLKKGDTYIALYGLGNVRDDRLH 214
Query: 720 RLFAEKKVEMERP--DETLDWFNLFVLHQ 800
R F KK+ +P + DWF + + HQ
Sbjct: 215 RCFRMKKLHFVQPKTEPGKDWFKILLFHQ 243
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 202 bits (494), Expect = 7e-51
Identities = 93/206 (45%), Positives = 135/206 (65%), Gaps = 3/206 (1%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
DT+RILI +D H+G+ E DP+RG+DS+ F E++ LA DVD++L GDLF KPS
Sbjct: 7 DTIRILITTDNHVGYNEQDPIRGDDSWKTFHEIMGLARTEDVDMVLQAGDLFHINKPSRK 66
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 542
M++ +R C G++P +ELLSD +T +NYEDPN+N+S P+ +I GNHDD
Sbjct: 67 SMYQVIRSLRMNCYGERPCELELLSDPTLALDQTFNHLNYEDPNINVSVPVFAISGNHDD 126
Query: 543 PVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSR 722
G + D+L+ TGL+N+FG+ T + ++P+L +KG T LALYGL++++D+RL R
Sbjct: 127 SGGDAMLCPNDVLAATGLINHFGRVTQNDQITVTPLLFRKGSTNLALYGLANVRDERLFR 186
Query: 723 LFAEKKVEMERPDETLDWFNLFVLHQ 800
FA VE RP + WF+L +HQ
Sbjct: 187 TFASGNVEFLRPQDDQAWFSLLAVHQ 212
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 200 bits (488), Expect = 3e-50
Identities = 108/237 (45%), Positives = 149/237 (62%), Gaps = 24/237 (10%)
Frame = +3
Query: 162 ENDISAWSPD--DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 335
E +S PD + RILIA+D H+G+ E DPVRG+DS F E+L LA DVD ILL
Sbjct: 19 EPPLSIVEPDLENCFRILIATDNHIGYAEKDPVRGQDSINTFREILELARDHDVDFILLA 78
Query: 336 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQI----KNFS-RTVNYEDPNLN 500
GDLF + +PS CM + ++R++ LGDKP+ ELLSD + FS VNYEDPN+N
Sbjct: 79 GDLFHENRPSRTCMHQTIALLREFTLGDKPIEFELLSDPMDGSTPGFSFPAVNYEDPNIN 138
Query: 501 ISYPILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKW----------TDYTHVRI 641
I+ P+ SIHGNHDDP G +G++ +LD+LS++G++NYFGK ++I
Sbjct: 139 IAIPVFSIHGNHDDPQGTGPEGALCALDVLSVSGVLNYFGKSDLVADESAADNPEKGIQI 198
Query: 642 SPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD----ETLDWFNLFVLHQ 800
PVLL+KG T +ALYG +++DQR+ + KV+M P DWFN+ ++HQ
Sbjct: 199 RPVLLRKGTTHVALYGCGNIRDQRMYQELRANKVKMFMPTGGNVPDSDWFNILLVHQ 255
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 199 bits (486), Expect = 6e-50
Identities = 98/211 (46%), Positives = 138/211 (65%), Gaps = 6/211 (2%)
Frame = +3
Query: 186 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
PD DT+RILI +D H+G+ ENDP+ G+DS+ F EV+ LA +VD+++ GDLF KP
Sbjct: 4 PDPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLFHVNKP 63
Query: 363 SVNCMFKCTEIIRKYCLGDKPVSIELLSD--QIKNFSR--TVNYEDPNLNISYPILSIHG 530
S +++ + +R C+GDKP +ELLSD Q+ ++ VNYEDPN NIS P+ I G
Sbjct: 64 SKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGISG 123
Query: 531 NHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQ 710
NHDD G + +DIL TGL+N+FGK + +++ P+L QKG T+LALYGL+ ++D+
Sbjct: 124 NHDDASGDSLLCPMDILHATGLINHFGKVIESDKIKVVPLLFQKGSTKLALYGLAAVRDE 183
Query: 711 RLSRLFAEKKVEMERPD-ETLDWFNLFVLHQ 800
RL R F + V E P +WFNL +HQ
Sbjct: 184 RLFRTFKDGGVTFEVPTMREGEWFNLMCVHQ 214
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 199 bits (486), Expect = 6e-50
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 5/209 (2%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGDLF + PS
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 536
+ T+++R+YCL P+++E LSD NF+++ VNY D NLN+ PI +IHGNH
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNH 182
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
DD G+G +++LD+L +GLVN FGK ++ +SP+LL+KG TRLALYG+ +D RL
Sbjct: 183 DDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRL 241
Query: 717 SRLFAEKKVEMERPDE-TLDWFNLFVLHQ 800
R F + RP+ DWFNLFVLHQ
Sbjct: 242 VRAFKNNSISFLRPNAGAEDWFNLFVLHQ 270
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 197 bits (481), Expect = 2e-49
Identities = 93/207 (44%), Positives = 134/207 (64%), Gaps = 4/207 (1%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+T+ ILI +D H+G+ ENDP+RG+DS FEE+ +A + DVD+++ GGDLF KPS
Sbjct: 12 NTISILITTDNHVGYHENDPIRGDDSGKTFEEITRIAKERDVDMVVQGGDLFHVNKPSKK 71
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 542
+++ + +R CLGD+P +EL+SD + VNYED N NI P+ +I GNHDD
Sbjct: 72 SLYQVIKSLRSNCLGDRPCELELISDPSMALTLDFPGVNYEDENFNIGVPVFAISGNHDD 131
Query: 543 PVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSR 722
G + LDIL+ +GLVNYFGK + + ++P+L +KG T+LALYG+ ++KD+RL R
Sbjct: 132 ATGDSLLLPLDILAASGLVNYFGKVVNNEDITVAPLLFKKGTTKLALYGIGNVKDERLHR 191
Query: 723 LFAEKKVEMER-PDETLDWFNLFVLHQ 800
+F + K R DE WFN +HQ
Sbjct: 192 VFRDNKATFLRSSDEPDSWFNFLCVHQ 218
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 190 bits (464), Expect = 3e-47
Identities = 100/217 (46%), Positives = 141/217 (64%), Gaps = 13/217 (5%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
++LR+L+A+D HLG++E D VRG DSF FEE+ SLAV+ VD +LL G+LF + KPS +
Sbjct: 83 NSLRVLVATDCHLGYLEKDEVRGFDSFDTFEEICSLAVKNKVDFLLLCGNLFHENKPSNS 142
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYPILSIHGNHDD 542
+ K EI+R+YC+ D PV +++SDQ ++N VNYEDPN I P+ +IHG+ D
Sbjct: 143 TLVKAIEILRRYCMNDCPVQFQVISDQAASLQNRFCQVNYEDPNYKIGLPVFTIHGDQDY 202
Query: 543 PVGQGSVSSLDILSITGLVNYFGK----WTDYTHVRISPVLLQKGLTRLALYGLSHLKDQ 710
P G ++S DIL+ +NYFGK T V + PV+++KG T +A+YGL ++KD
Sbjct: 203 PTGTDNLSVNDILTAGNFLNYFGKTDLGCTGVGKVTVYPVVIRKGETYIAMYGLGNIKDG 262
Query: 711 RLSRLFAE----KKVEMERPDET--LDWFNLFVLHQK 803
RL R+ E ++ E DET DWFN+ VLHQK
Sbjct: 263 RLKRMLHEPGAVNWMQPEFQDETPSSDWFNILVLHQK 299
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: Mre11
protein - Ostreococcus tauri
Length = 1229
Score = 190 bits (463), Expect = 4e-47
Identities = 100/230 (43%), Positives = 145/230 (63%), Gaps = 25/230 (10%)
Frame = +3
Query: 186 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
PD +TLR+L+A+D HLGF E D VR +D+F AFEE+ A + D + + GD+FD KP
Sbjct: 473 PDPNTLRVLVATDTHLGFAERDAVRKDDAFAAFEEIFRHAREQKCDCVFMAGDVFDVNKP 532
Query: 363 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF--------------SRTVNYEDPNLN 500
S + +C +++R+ GD V IE+LSD +NF + VNYEDP+ N
Sbjct: 533 SRETLVRCMDVLREATRGDGAVRIEVLSDTKENFPHRVHSPDGDVRPHAGIVNYEDPHTN 592
Query: 501 ISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWT----DYTHVRISPVLLQKGL 668
+ P+ SIHGNHDDP G+ ++S++D+L+ G+VNYFGK +V + PVLL+KG
Sbjct: 593 VELPVFSIHGNHDDPAGERNLSAMDVLASAGVVNYFGKHALAGGGTGNVDLKPVLLRKGT 652
Query: 669 TRLALYGLSHLKDQRLSRLFAEKK-VEMERPDETLD-----WFNLFVLHQ 800
T++ALYGL +++D RL ++F+ K V RP ET D WFN+ ++HQ
Sbjct: 653 TKVALYGLGYIRDNRLHQMFSVKGCVRWHRPAETEDCSSSSWFNVMLIHQ 702
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 189 bits (461), Expect = 7e-47
Identities = 92/208 (44%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
++ +++L+A+DI+LG+ E R +DSF FEE+L A +VD IL G+LF +A P +
Sbjct: 24 ENIIQVLVAADINLGY-EQTVKREDDSFRTFEEILIYARDYEVDAILFAGNLFYEANPPL 82
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILSIHGNH 536
N + +C ++RKYCL DKP I+ L+D F+ + N++DP LNI PI +IHG+
Sbjct: 83 NVITRCISLLRKYCLSDKPAKIDCLTDPEWIFNHCPDKIANFKDPKLNIGMPIFAIHGHR 142
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
D P+ G V +LD+L+ TGL+NYFGKW D + I PVLL+KG+T LALYGL+H+ D +L
Sbjct: 143 DAPLF-GPVGALDLLAATGLINYFGKWPDKDKISIPPVLLRKGITTLALYGLNHMNDHKL 201
Query: 717 SRLFAEKKVEMERPDETLDWFNLFVLHQ 800
++ K+E+ + + D N+ VLHQ
Sbjct: 202 TKCIKRDKLELLQEETIPDLCNVLVLHQ 229
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 186 bits (453), Expect = 6e-46
Identities = 88/201 (43%), Positives = 133/201 (66%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++ILI SD HLG+ E+DPV +DS+ FEE+L +A + VDL+L GGDLF + +PS +C+
Sbjct: 1 MKILITSDNHLGYRESDPVLLDDSYDTFEEILGIAQRERVDLVLQGGDLFHENRPSRSCL 60
Query: 378 FKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 557
+ + R+YC+G++ + N + +N+ D N+ IS P++SIHGNHDDP G
Sbjct: 61 NRTIGLFRRYCIGNERSGLR------SNLA--LNFHDQNIGISIPVVSIHGNHDDPSGIS 112
Query: 558 SVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEK 737
VS +DIL GLVNY GK+ + + P+LL+K R+A+YGL H+KD+RL R+F E
Sbjct: 113 MVSPIDILQSAGLVNYIGKYNLIDRIDVYPLLLEKEY-RVAIYGLGHIKDRRLYRMFCEG 171
Query: 738 KVEMERPDETLDWFNLFVLHQ 800
++ RP++ W+N+ +LHQ
Sbjct: 172 RIVFHRPEDYDSWYNVLILHQ 192
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 185 bits (451), Expect = 1e-45
Identities = 90/207 (43%), Positives = 138/207 (66%), Gaps = 3/207 (1%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
++T +IL+A+D H+G+ ENDP+RG DSF AFEEVL +A VD +LLGGDLF + PS
Sbjct: 21 ENTFKILVATDNHVGYKENDPIRGNDSFEAFEEVLKIAKSEKVDFLLLGGDLFHETNPSQ 80
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPV 548
C++K ++ Y LGD E+L I N++ VN++D NLNI PI IHGNHD P
Sbjct: 81 QCLYKMLNLLGNYVLGDG----EILYG-ISNYN-DVNFQDCNLNIELPIFVIHGNHDYPS 134
Query: 549 GQ-GSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRL 725
+ G++S +D+L T +N+FGK+++ ++++P++ QKG T +ALYG+ +LKD+ ++
Sbjct: 135 DEYGNLSVIDLLHATKYLNHFGKFSNIEQIKVTPIIFQKGNTTVALYGIGYLKDKYFHKM 194
Query: 726 FAEKKVEMERPDET--LDWFNLFVLHQ 800
E K+E +P++ D N+ V+HQ
Sbjct: 195 LEEGKIEFVKPEQMGYKDTVNILVIHQ 221
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 183 bits (445), Expect = 6e-45
Identities = 88/204 (43%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
DT+RIL+++D H+G+ E DP+RG+DS+ F E++ LA + DVD++LL GDLF + N
Sbjct: 14 DTIRILVSTDNHVGYNERDPIRGDDSWKTFHEIMCLAKERDVDMVLLAGDLFHENNHPAN 73
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVG 551
C + Y +++ + VNYED ++N++ P+ SIHGNHDDP G
Sbjct: 74 ---PCIKSCAPYA--------QIVWGAFNH----VNYEDLDINVAIPVFSIHGNHDDPSG 118
Query: 552 QGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFA 731
+G +++LDIL ++GL+NY+G+ + ++++ PVLLQKG T+LALYGLS+++D+RL R F
Sbjct: 119 EGHLAALDILQVSGLLNYYGRTPESDNIQVKPVLLQKGRTKLALYGLSNVRDERLFRTFR 178
Query: 732 EKKVEMERPD-ETLDWFNLFVLHQ 800
+ KV+ +P + DWFNL +HQ
Sbjct: 179 DGKVKFFQPSVQKEDWFNLICVHQ 202
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 163 bits (395), Expect = 6e-39
Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 9/212 (4%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+T +ILI SD HLG E +D ++AFEE+L A Q DVDLIL GD FD PS
Sbjct: 6 NTFKILICSDTHLGAGEKSHCLKDDCYLAFEEILQQANQEDVDLILHSGDFFDDQNPSKY 65
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVG 551
C+ K E++RKY +G S ++ N + N N I YP+ IHGNHD P G
Sbjct: 66 CLTKTMELMRKYLMGKPKNSFDVAYTYEHN--QEDNGFSMNQGIKYPMYVIHGNHDIPSG 123
Query: 552 QGSVSSLDILSITGLVNYFGK---------WTDYTHVRISPVLLQKGLTRLALYGLSHLK 704
V+ LDIL GLVN+ GK TD T + +SP+LLQKG TR+ALYG+S+ K
Sbjct: 124 IEHVAGLDILQTAGLVNFIGKAEDISEIDNKTDQTILHLSPILLQKGTTRIALYGMSYKK 183
Query: 705 DQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
++ ++RL+A +V+++ PD D F + ++HQ
Sbjct: 184 NEEMNRLWASSQVQIDEPDG--DVFKILLIHQ 213
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 154 bits (373), Expect = 3e-36
Identities = 82/205 (40%), Positives = 129/205 (62%), Gaps = 5/205 (2%)
Frame = +3
Query: 201 RILIASDIHLGFMEN---DPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+ L+ASD HLG EN R +D+F AFEEVL +A Q +VD ++LGGDLF + P+ +
Sbjct: 382 KFLVASDNHLGANENVGPKSNRYQDAFDAFEEVLQIASQQNVDFVILGGDLFHEKHPTEH 441
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVG 551
C+ KC +I++++ GD I++ ++ + + N+ N N+ PI I+GNHDD V
Sbjct: 442 CLLKCVDILQRHVFGDNFGGIQM---EVNSLNYQPNFSCSNFNVQLPIFIINGNHDDIVT 498
Query: 552 Q--GSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRL 725
+ SVS LDIL + +NY GK TD ++V I P++L K ++ALYGL ++KD +L ++
Sbjct: 499 ERNESVSILDILHESKYLNYIGKITDQSNVCIKPIVLVKNNQKIALYGLGYMKDYQLHKI 558
Query: 726 FAEKKVEMERPDETLDWFNLFVLHQ 800
E K+ ++ DE + FN+ ++HQ
Sbjct: 559 INEGKLVLDSLDE--NNFNILIIHQ 581
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 142 bits (343), Expect = 1e-32
Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
LR +I +D HLG E DP+R DSF AF+EVL LA VD IL GDLFD + PS + +
Sbjct: 207 LRFMIFTDTHLGHKETDPIRENDSFNAFQEVLFLAKYLQVDGILHAGDLFDDSHPSRSVI 266
Query: 378 FKCTEIIRKYC-----LGDKPVSIEL-LSDQIKNFSR---TVNYEDPNLN--ISYPILSI 524
++ E++R+YC P++I L S +++ ++ + + D + P I
Sbjct: 267 YRTMELLRRYCRKSDLTSPLPLNIRLPKSCAVRSETKRLEALKFIDGTITKEARVPFFVI 326
Query: 525 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 704
HGNHD+P +S +D+L ++GLV +FG TD T V + P+ + KG LALYG+ +K
Sbjct: 327 HGNHDNPTTMNGLSPIDLLDVSGLVTFFGTVTDMTKVEVHPICISKGDIHLALYGMGWVK 386
Query: 705 DQRLSRLFAEKKVEMERPDET-LDWFNLFVLHQ 800
++ L + F E KV P T + ++ + + H+
Sbjct: 387 EEFLYKAFEENKVVFVPPVNTGISYYKVLLFHE 419
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 137 bits (332), Expect = 3e-31
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 27/248 (10%)
Frame = +3
Query: 138 SCTSKIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 317
S SK D+ D+ ++IL+ +D HLG+ E+DP RG DS FEE+L +A +V
Sbjct: 244 SDVSKEFEFKDLDESEDDNVVKILVFTDTHLGYKEDDPFRGNDSLNTFEELLFIAKHLEV 303
Query: 318 DLILLGGDLFDQAKPSVNCMF-------------KCTEIIRKYCLGD----KPVSIELLS 446
D IL GDLFD+ PS M+ + +++ Y L K E+ S
Sbjct: 304 DFILHSGDLFDKNMPSRTTMYLLIINSLMNGIRYRTMDLLSTYLLSSMSKIKVDKSEVES 363
Query: 447 DQIKNFSRTVNYEDPNLNISY----------PILSIHGNHDDPVGQGSVSSLDILSITGL 596
++ +F + V +P +++Y P IHGNHD+P Q S+S +DIL + GL
Sbjct: 364 AKLISFDKGVA-NNPLGDLAYSSGVSKEFLTPFFVIHGNHDNPTYQHSLSPIDILDVAGL 422
Query: 597 VNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDW 776
V YFG+ D +V I P+ + KG ++ALYGL +KD+RL +F + V+ E+ +E +
Sbjct: 423 VTYFGRVFDLENVVIKPIKISKGDVKIALYGLGWIKDERLVEMFNKNMVKFEQCEEFDKY 482
Query: 777 FNLFVLHQ 800
+ + ++HQ
Sbjct: 483 YKILMIHQ 490
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 128 bits (310), Expect = 1e-28
Identities = 59/145 (40%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Frame = +3
Query: 375 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 554
M+K IIR+YC+G+K + L+ Q + N+E + N+S P IHGNHDDP +
Sbjct: 1 MYKVMNIIREYCMGNKQIKFRALNRQDSSNVNGYNWEVGDANVSIPFFGIHGNHDDPGEE 60
Query: 555 GSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAE 734
G +S LDIL +NY GK + ++ + PVLL+KG TRLA+YG+ +++D+RL R F +
Sbjct: 61 GLLSPLDILESARFINYIGKNNNVDNIEVFPVLLEKGSTRLAIYGIGNIRDERLHRSFEK 120
Query: 735 KKVEMERPDET---LDWFNLFVLHQ 800
KV+ P+ T +WF++ + HQ
Sbjct: 121 NKVKFLIPENTNGDSEWFSILLFHQ 145
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 124 bits (299), Expect = 3e-27
Identities = 62/194 (31%), Positives = 110/194 (56%)
Frame = +3
Query: 183 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
S DT +I I +D H+G+ E D + +DSF AF+E + A + D+IL GD F++ P
Sbjct: 4 SQQDTFKIAIFTDTHIGYDEQDAITEKDSFRAFKECVQNAHIQNADIILHAGDFFNERNP 63
Query: 363 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDD 542
S + K +I+ ++ +G L S+ + S N+ +PN+NI P +HGNHD
Sbjct: 64 SRYAVIKTMKILDEFVIGQGNPPEILYSEGL---SSDPNWLNPNINIKIPFFCMHGNHDA 120
Query: 543 PVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSR 722
P G GS S + +LS++ +N+F + + P++L++G R+ +YGL ++ +++
Sbjct: 121 PNGLGSTSPIQLLSVSKYLNFFKPVDIKETIELQPIVLKRGTIRVVVYGLGYIFEEKFKE 180
Query: 723 LFAEKKVEMERPDE 764
+ KK+++ P+E
Sbjct: 181 VVMGKKLKLIAPEE 194
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 123 bits (296), Expect = 6e-27
Identities = 59/201 (29%), Positives = 109/201 (54%)
Frame = +3
Query: 195 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
++ + D HLG+ E + +D + FE+ L A Q + ++L GDLF+ +P+ +C
Sbjct: 2 SITFFVTGDNHLGYYEKNLTLKDDCYKLFEQYLKEATQKEGSILLQCGDLFNDLRPNKSC 61
Query: 375 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 554
+ K +I+KYC+GD + + + S +N DP +N+ +P+ +IHG +D+P G
Sbjct: 62 VSKTANLIKKYCIGDADIPYTIKDEA--ELSYPLNITDPYINVKHPLFTIHGTNDEPSGY 119
Query: 555 GSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAE 734
++ +IL+ GLVNY + + PV++ T++ALYGLS L L + +
Sbjct: 120 KLIAGSEILASCGLVNYISPKSFEEEKMLKPVIIVNEHTKIALYGLSVLYSSDLDEIVED 179
Query: 735 KKVEMERPDETLDWFNLFVLH 797
+ +++P+ DW + +L+
Sbjct: 180 ETFHIKKPNGN-DWICILLLY 199
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 87.0 bits (206), Expect = 5e-16
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +3
Query: 510 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYG 689
P+ ++HGNHD P +S LDIL + L+NY GK + + I PVLL K T++A+Y
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLINYIGK-SSLDRIVIKPVLLNKEETKIAIYA 607
Query: 690 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
+ +KD+RL R F EKKV+ P + N+ VLHQ
Sbjct: 608 IGWIKDERLHRAFEEKKVKFMLPSDHACRINVLVLHQ 644
Score = 79.4 bits (187), Expect = 1e-13
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 159 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGG 338
I +S PD TL+IL+ +D HLG+ EN+ V+ ED+F +FEE+L +A +VDLIL G
Sbjct: 295 IRKSLSKNEPD-TLKILLCTDNHLGYKENNAVQKEDTFNSFEEILFVAKHLNVDLILNSG 353
Query: 339 DLFDQAKPSVNCMFKCTEIIRKYC 410
DLF + K S +FK IIR+YC
Sbjct: 354 DLFHKNKISEYTLFKSMAIIRRYC 377
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 83.4 bits (197), Expect = 6e-15
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
DTL+IL+ +D HLG+ EN+P++ +D+F FEE+L +A + +VD+IL GDLF + K S
Sbjct: 303 DTLKILLCTDNHLGYKENNPIQKKDTFNTFEEILFIAKKLNVDMILNSGDLFHKNKVSEY 362
Query: 372 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR-TVNYEDPN-LNISYP 512
+FK IIRKYC E + N + VN+ + N LN+++P
Sbjct: 363 TLFKTMSIIRKYCHVHNTKDDERYQNANLNMNHLNVNHLNVNHLNMNHP 411
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/99 (37%), Positives = 58/99 (58%)
Frame = +3
Query: 504 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLAL 683
S P +IHGNHD P + LDIL+I+ L+NY GK + + I P+LL K T +++
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLINYIGK-NNMEKLIIKPILLNKKGTHISI 594
Query: 684 YGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
Y + +KD+RL F K ++ P++ + N+ +LHQ
Sbjct: 595 YAIGWIKDERLYNYFENKNIKFIIPEDYKNRINILLLHQ 633
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 81.4 bits (192), Expect = 3e-14
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = +3
Query: 510 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYG 689
P +IHGNHD P +S LDIL+I+ L+NY GK + ++ + P+LL K +++++Y
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLINYIGK-NNLNNIVVKPILLNKYKSKISIYA 641
Query: 690 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 800
+ +KD+RL R F +V+ P + + N+ VLHQ
Sbjct: 642 VGWMKDERLYRSFENNEVKFILPSDYKNRINILVLHQ 678
Score = 77.0 bits (181), Expect = 6e-13
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +3
Query: 195 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
TL+IL+ +D HLG+ EN+ ++ +DSF +FEE+L +A + +VD+IL GDLF + K S
Sbjct: 350 TLKILLCTDNHLGYKENNSIQKKDSFNSFEEILFIAKKLNVDMILNSGDLFHKNKVSEYT 409
Query: 375 MFKCTEIIRKYC 410
+FK IIRKYC
Sbjct: 410 LFKSMYIIRKYC 421
>UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein
mre11; n=4; Thermococcaceae|Rep: DNA double-strand break
repair protein mre11 - Pyrococcus furiosus
Length = 426
Score = 50.4 bits (115), Expect(2) = 8e-07
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 392
+DIHLG+ + + P R E+ AF+ L +AVQ +VD IL+ GDLF ++PS + K
Sbjct: 7 ADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIA 66
Query: 393 IIR 401
+++
Sbjct: 67 LLQ 69
Score = 25.8 bits (54), Expect(2) = 8e-07
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 504 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFG 611
S P+ +I GNHD Q S L++L GLV G
Sbjct: 75 SIPVFAIEGNHDRT--QRGPSVLNLLEDFGLVYVIG 108
>UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein
mre11; n=2; Methanosarcina|Rep: DNA double-strand break
repair protein mre11 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 617
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
D +RIL +D HLG+ + + VR +D F AFE V+ AV VD ++ GDLFD P+
Sbjct: 2 DREIRILHTADTHLGYRQYHSEVRRQDFFKAFETVIKDAVDMQVDAVVHAGDLFDSRNPT 61
Query: 366 VNCMFKCTEIIRKYCLGDKP 425
+ + + ++ + + + P
Sbjct: 62 LEDLLETMNVLSRLKVANIP 81
>UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina
barkeri str. Fusaro|Rep: DNA repair protein -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 776
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 198 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
+RIL +D HLG+ + + VR D F AFE V++ AV+ VD ++ GDLFD P++
Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQVDAVVHAGDLFDSRNPTLED 64
Query: 375 MFKCTEIIRKYCLGDKP 425
+ + ++ + D P
Sbjct: 65 LLETINLLSRLKAADIP 81
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 35.1 bits (77), Expect(2) = 5e-05
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +3
Query: 192 DTLRILIASDIHLGFM---ENDPVRGEDSFI-----AFEEVLSLAVQCDVDLILLGGDLF 347
D + +L +DIHLGF DP G ++ + + E V+ A+ DVD L GD +
Sbjct: 21 DVVTLLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEAVVQRALDADVDAFLFCGDAY 80
Query: 348 DQAKPSVNCMFKCTEIIRKYCLGDKPV 428
A P+ + +R D PV
Sbjct: 81 HTADPTPTQQDIFVQCLRPLADADIPV 107
Score = 35.1 bits (77), Expect(2) = 5e-05
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 489 PNLNISYPILSIHGNHDDPVGQGSVSSLDILS-ITGLVNYFGK 614
P + P++ I GNHD PV G SSLDI I G V+ + K
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRK 141
>UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=2; Rhodobacteraceae|Rep: Putative ATP-dependent dsDNA
exonuclease - Roseobacter sp. SK209-2-6
Length = 380
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+RIL +D+HLG N ED E++LS V DVD++++ GD+FD+A P + +
Sbjct: 1 MRILHTADLHLGRQFNGISLEEDHAAILEQILSAVVAHDVDVLIIAGDIFDRAAPPASAV 60
>UniRef50_A5YS39 Cluster: DNA double-strand break repair protein
mre11; n=1; uncultured haloarchaeon|Rep: DNA
double-strand break repair protein mre11 - uncultured
haloarchaeon
Length = 397
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 195 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
T IL SD HLG + + VR +D AF++ +S+A+Q DVD ++ GDLFD P++
Sbjct: 11 TTTILHISDTHLGNRQYEYDVRRDDFSDAFDQSVSIAIQEDVDAVIHTGDLFDTRDPTLP 70
Query: 372 CMFKCTEII 398
+ C +I+
Sbjct: 71 DINDCIDIL 79
>UniRef50_O29231 Cluster: DNA double-strand break repair protein
mre11; n=1; Archaeoglobus fulgidus|Rep: DNA
double-strand break repair protein mre11 - Archaeoglobus
fulgidus
Length = 443
Score = 49.2 bits (112), Expect = 1e-04
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Frame = +3
Query: 216 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 392
+D+HLG+ + N P R ED AF+ + AV+ + D +++ GDLF ++ PS + + E
Sbjct: 7 ADVHLGYEQYNQPWRAEDFAKAFKVIAEKAVESNADFVVIAGDLFHRSLPSPRTIKEAVE 66
Query: 393 IIRKYCLGDKPV-SIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSS 569
+ + + PV ++E D+ SR ++ +L S +L++ G +PV +V S
Sbjct: 67 TLWMFRKENIPVFAVEGNHDKT---SRDISAY--HLLESLGLLNVLGLRRNPVRGENVES 121
Query: 570 LDILSI 587
L I ++
Sbjct: 122 LRIQNV 127
>UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein
mre11; n=1; Pyrococcus abyssi|Rep: DNA double-strand
break repair protein mre11 - Pyrococcus abyssi
Length = 423
Score = 45.2 bits (102), Expect(2) = 2e-04
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 392
+D+HLG+ + N R E+ AFE+ + + V VD I++ GDLF+ ++PS + +
Sbjct: 17 ADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGTIKTAVK 76
Query: 393 IIR 401
I++
Sbjct: 77 ILQ 79
Score = 23.0 bits (47), Expect(2) = 2e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 510 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFG 611
P+ +I GNHD Q S L +L GL+ G
Sbjct: 87 PVFAIEGNHDRT--QRGPSILHLLEDLGLLYVLG 118
>UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Predicted DNA
repair exonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 407
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGE-DSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
L +L SD HLG+ + + E D + FEEV+ +A++ VD ++ GDLFD +P
Sbjct: 11 LHLLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGDLFDSTRPPAQA 70
Query: 375 MFKCTEIIRK 404
+ ++K
Sbjct: 71 IRAAIRALKK 80
>UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphagus
sp. PR1|Rep: DNA repair exonuclease - Algoriphagus sp.
PR1
Length = 414
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP---SV 368
++IL +D HLG + R E+ + EE++ +A Q +VDL+LL GD+FD P +V
Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFNPNHEAV 61
Query: 369 NCMFKCTEIIRKYCLGDKPV 428
++K + K G++P+
Sbjct: 62 ELLYKTLRRLSKN--GERPI 79
>UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family
protein; n=4; Synechococcus|Rep: Ser/Thr protein
phosphatase family protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 430
Score = 46.4 bits (105), Expect = 9e-04
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +3
Query: 195 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLS-LAVQCDVDLILLGGDLFD--QAKP 362
T L +D+HLG+ D P R +D F+AF +V+ A+Q VD +L+ GDLF+ Q +P
Sbjct: 5 TCTFLHLADVHLGYDRYDSPERSKDFFLAFRDVVRRYAIQDPVDFVLIAGDLFEHRQIQP 64
Query: 363 SV 368
V
Sbjct: 65 GV 66
>UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Conserved DNA
repair operon protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 451
Score = 46.4 bits (105), Expect = 9e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 201 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
R+L D H+G+ + + P R ED AF +V AV+ DVD ++ GDLF +P + +
Sbjct: 3 RVLHTGDTHIGYRQYHTPERREDFLSAFRQVADDAVEMDVDAVVHAGDLFHDRRPGLVDL 62
Query: 378 FKCTEII 398
+I+
Sbjct: 63 LGTVDIL 69
>UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Metallophosphoesterase - Methanococcoides burtonii
(strain DSM 6242)
Length = 485
Score = 46.4 bits (105), Expect = 9e-04
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 198 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
+RIL D H+G+ + + VR +D AF V+ A+ VD+++ GDLFD P++
Sbjct: 5 IRILHTGDTHIGYRQYHSEVRRQDFIDAFSSVIDDAIDMKVDVVVHAGDLFDSRNPTLED 64
Query: 375 MFKCTEIIRK 404
+ +++ K
Sbjct: 65 ILDTIKVLLK 74
>UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus
elongatus|Rep: Tll0060 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 428
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +3
Query: 198 LRILIASDIHLGF---MENDPVRGEDSFIAFEEVL-SLAVQCDVDLILLGGDLFDQ 353
+R L +D+HLG+ +++P R D F AF+ L + A+Q VD +L+ GDLF++
Sbjct: 2 VRFLHVADVHLGYNKYRQDNPSRMLDFFRAFDSALETYAIQAQVDFVLIAGDLFEE 57
>UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia
intestinalis|Rep: GLP_90_7352_9805 - Giardia lamblia
ATCC 50803
Length = 817
Score = 44.0 bits (99), Expect = 0.005
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Frame = +3
Query: 201 RILIASDIHLGFMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
RI + +D HLGF P ++++ EE L LA + IL GD F+Q + S
Sbjct: 9 RIALFTDTHLGFTAPSARPCNAHENYLLLEECLCLARKLGAHAILHAGDFFNQNRLSSKK 68
Query: 375 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 554
+ K +R+Y + ++ D + S P+ I+GNHD+
Sbjct: 69 VIKAICALRRYGVS--------------------SFADHSDGDSIPMALIYGNHDN---- 104
Query: 555 GSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 704
+ L +L G V+ G + + P+ G L +YGL + K
Sbjct: 105 -NDKILGLLEAAGAVSLLGHTQAGKSLTLHPLCQVVGGVELVVYGLDYHK 153
>UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanopyrus kandleri|Rep: DNA double-strand
break repair protein mre11 - Methanopyrus kandleri
Length = 451
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 198 LRILIASDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
+R+ +D+HLG + N R E FE ++ +C VD++++ GDLF+ A+P
Sbjct: 1 MRMAHVADVHLGHALMNLRSREEAVMETFERLMEEVRECSVDVLVIAGDLFEHARPKTEA 60
Query: 375 MFKCTE 392
++ E
Sbjct: 61 LYLAVE 66
>UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein
Mre11; n=1; Methanosphaera stadtmanae DSM 3091|Rep: DNA
double-strand break repair protein Mre11 -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 393
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 195 TLRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
T++I +D HLG+ + E+ F FE+++ + DVD +L GDLF+ KP +
Sbjct: 2 TIKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFEHPKPPIK 61
Query: 372 CMFKCTEIIRKYCLGDKPVSI 434
+ + K + P+ +
Sbjct: 62 ALLVAQKGFEKLLENNIPIFV 82
>UniRef50_P62131 Cluster: DNA double-strand break repair protein
mre11; n=4; Methanococcus|Rep: DNA double-strand break
repair protein mre11 - Methanococcus maripaludis
Length = 372
Score = 36.3 bits (80), Expect(2) = 0.013
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 216 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 392
+D HLG+ + N R D + +F E + ++ D ++ GDLF+ +P VN + E
Sbjct: 7 ADNHLGYRQYNLDERENDIYESFLECIDKIIEIRPDFVIHSGDLFESPQPPVNAIRCAME 66
Query: 393 IIRKYCLGDKPVSIELL 443
+ K L +K + I L+
Sbjct: 67 GLLK--LKEKNIPIYLI 81
Score = 25.4 bits (53), Expect(2) = 0.013
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 510 PILSIHGNHDDPVGQ 554
PI IHGNHD P Q
Sbjct: 77 PIYLIHGNHDIPKSQ 91
>UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 425
Score = 41.9 bits (94), Expect = 0.019
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +3
Query: 168 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 347
D+ A + IL SD HLG + G+ + E +++L + VD +L+ GD+F
Sbjct: 15 DVGALCHTGDMLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVF 74
Query: 348 DQAKPSVNCMFKCTEIIRK 404
D+A P V+ + + +R+
Sbjct: 75 DRAVPPVDALARMRRALRE 93
>UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4;
Lactobacillus|Rep: DNA repair exonuclease -
Lactobacillus casei (strain ATCC 334)
Length = 373
Score = 41.5 bits (93), Expect = 0.025
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+R L +D H+G ND ED FE+++ A VD I++ GDL+D+A PS
Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAETHKVDAIVIAGDLYDRALPS 56
>UniRef50_O26641 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanothermobacter thermautotrophicus str.
Delta H|Rep: DNA double-strand break repair protein
mre11 - Methanobacterium thermoautotrophicum
Length = 587
Score = 41.5 bits (93), Expect = 0.025
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +3
Query: 216 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEI 395
SD HLG ++ +R E F AF L A+Q DVD +++ GDLF P++ + + T
Sbjct: 177 SDCHLGAQKHPDLR-ELEFEAFRMALDDALQKDVDFMIIAGDLFHSNIPNMETVKRATLE 235
Query: 396 IRKYCLGDKPVSI 434
+R+ P+ +
Sbjct: 236 LRRVREAGVPIYV 248
>UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1;
Aquifex aeolicus|Rep: ATP-dependent dsDNA exonuclease -
Aquifex aeolicus
Length = 379
Score = 41.1 bits (92), Expect = 0.033
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
+R++ SDIH G R ED A +V+ + DL+L+ GD+FD+A P
Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANP 55
>UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=40;
Gammaproteobacteria|Rep: Nuclease SbcCD, D subunit
precursor - Shewanella sp. (strain MR-7)
Length = 400
Score = 41.1 bits (92), Expect = 0.033
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+R + SD H+G ++ ED +++++LA Q VD +++ GD++D++ P + +
Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV 60
Query: 378 FKCTEIIRK 404
E++ +
Sbjct: 61 ALLDEVLNR 69
>UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein
mre11; n=1; Aeropyrum pernix|Rep: DNA double-strand
break repair protein mre11 - Aeropyrum pernix
Length = 409
Score = 41.1 bits (92), Expect = 0.033
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 201 RILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++L +D+HLG R +D F +FE V+ A++ D +L+ GDLFD+ K + +
Sbjct: 3 KVLHVADVHLGARPYGLEERRDDIFRSFEFVVETALKDRPDAVLIAGDLFDKPKLPLRDV 62
Query: 378 FKCTEIIR 401
+ E++R
Sbjct: 63 KQAVELVR 70
>UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6;
Streptococcaceae|Rep: ATP-dependent dsDNA exonuclease -
Streptococcus thermophilus (strain CNRZ 1066)
Length = 408
Score = 40.7 bits (91), Expect = 0.044
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++ L SD H+G N E+ AF++++ LA+ VD +++ GDL+D+A P V+ +
Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVDAI 66
>UniRef50_A6UUX3 Cluster: Metallophosphoesterase; n=1; Methanococcus
aeolicus Nankai-3|Rep: Metallophosphoesterase -
Methanococcus aeolicus Nankai-3
Length = 399
Score = 40.3 bits (90), Expect = 0.059
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 216 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 392
SD HLG+ + N R +D + AF + + D ++ GDLF+Q+ P +N ++ +
Sbjct: 7 SDNHLGYRQYNLDEREKDMYNAFNMCIDEIINIKPDFVVHSGDLFEQSTPPINALYTAIK 66
Query: 393 IIRKYCLGDKPVSI 434
K + PV I
Sbjct: 67 AFEKLKECNIPVYI 80
>UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein
mre11; n=5; Halobacteriaceae|Rep: DNA double-strand
break repair protein mre11 - Halobacterium salinarium
(Halobacterium halobium)
Length = 387
Score = 40.3 bits (90), Expect = 0.059
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 201 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
R++ D HLG+ + + P R +D AF+ V++ A+ VD ++ GDL+ +P + +
Sbjct: 3 RVIHTGDTHLGYQQYHAPQRRQDFLDAFDAVITDAIDEGVDAVVHAGDLYHDRQPGLRDI 62
Query: 378 FKCTEIIRKYCLGDKP 425
++R D P
Sbjct: 63 LDTIALLRPLQDADIP 78
>UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter
carbinolicus DSM 2380|Rep: DNA repair exonuclease -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 370
Score = 39.9 bits (89), Expect = 0.077
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 198 LRILIASDIHLGFM-----ENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
+RIL +DIHLG + E R D AFE ++ LA+ V L+++ GDLF P
Sbjct: 2 IRILHTADIHLGAVFAELAECAAARRNDQLYAFERMVELAIDRKVHLLVVAGDLFASPWP 61
Query: 363 SVNCMFKCTEIIRKYC 410
+ + + ++ C
Sbjct: 62 TTDLVSHVRAGFQRLC 77
>UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeum
symbiosum|Rep: DNA repair exonuclease - Cenarchaeum
symbiosum
Length = 417
Score = 39.9 bits (89), Expect = 0.077
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 347
+R ASDIHLGF + ++G + + FE+V+ + VD +L+ GD+F
Sbjct: 1 MRFAHASDIHLGFQDGAALQGIEREV-FEKVIDGCISRKVDFVLMPGDIF 49
>UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n=1;
unknown|Rep: UPI00015BCD31 UniRef100 entry - unknown
Length = 380
Score = 39.5 bits (88), Expect = 0.10
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
++ L DIH G + R +D+ A +V+ + VD IL+ GD+FDQ P
Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTP 56
>UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2;
Lactobacillales|Rep: Exonuclease SbcD - Lactobacillus
plantarum
Length = 393
Score = 39.5 bits (88), Expect = 0.10
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+++L +D H+G N ++ AF+++L++A+ VD I++ GD++D+A PS + +
Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV 60
>UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep:
Metallophosphoesterase - Candidatus Nitrosopumilus
maritimus SCM1
Length = 415
Score = 39.5 bits (88), Expect = 0.10
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 216 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
SDIHLGF + ++ + + FEEV+ ++ VD +L+ GDLF + P +
Sbjct: 8 SDIHLGFQDKKELQKIEQEV-FEEVVCTCIKQKVDFVLITGDLFHRNLPEM 57
>UniRef50_A5UJE8 Cluster: DNA repair exonuclease
(SbcD/Mre11-family), Rad32; n=1; Methanobrevibacter
smithii ATCC 35061|Rep: DNA repair exonuclease
(SbcD/Mre11-family), Rad32 - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 407
Score = 39.5 bits (88), Expect = 0.10
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 216 SDIHLGFMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+D HLG+ + + R +D + F++++ ++ VD ++ GDLFD A+PS + +
Sbjct: 7 ADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSAL 61
>UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Metallophosphoesterase - Fervidobacterium nodosum
Rt17-B1
Length = 397
Score = 39.1 bits (87), Expect = 0.14
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +3
Query: 198 LRILIASDIHLG------FMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 353
++IL SD HLG EN R D F A E ++ A++ +VDL ++ GDLFD
Sbjct: 1 MKILHTSDWHLGKRPVGGIGENSYSDFRYNDYFNAAEYIVDRAIEENVDLFIIAGDLFDS 60
Query: 354 AKPSVNCMFKCTEIIRKYCLGDKPV 428
K + + + + I++K D PV
Sbjct: 61 NKINPDILERTEGILKKLKDKDIPV 85
>UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Rep:
ID473 - Bradyrhizobium japonicum
Length = 173
Score = 38.7 bits (86), Expect = 0.18
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+RIL +D H+G R + FE + + V+ DVD +++ GD+FD PS
Sbjct: 2 IRILHTADWHIGQTLRGFSREHEHRKVFERLEEIVVERDVDALIIAGDVFDSQNPS 57
>UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1;
Halothermothrix orenii H 168|Rep: Metallophosphoesterase
- Halothermothrix orenii H 168
Length = 464
Score = 38.7 bits (86), Expect = 0.18
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Frame = +3
Query: 192 DTLRILIASDIHLGFMENDPVR-----GE----DSFIAFEEVLSLAVQCDVDLILLGGDL 344
D L+ + ASDIHLG + + GE ++ AF + + A++ +VD ++L GD+
Sbjct: 8 DELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDI 67
Query: 345 FDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYED 488
FD+ SV M ++ L +K + + L++ VN D
Sbjct: 68 FDRESKSVVAMKHFIGECKR--LNEKGIPVYLIAGNHDPLREQVNIMD 113
>UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3;
Clostridiaceae|Rep: Nuclease SbcCD, D subunit -
Alkaliphilus metalliredigens QYMF
Length = 406
Score = 38.7 bits (86), Expect = 0.18
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +3
Query: 198 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
++IL SD HLG N + ++ F+ EE++++ + ++DLIL+ GD++D + P
Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFL--EELVTIVNEKEIDLILVAGDIYDTSNPPAQ 58
Query: 372 CMFKCTEIIRKYCL-GDKPVSI 434
+ ++K G +P+ I
Sbjct: 59 AERLFYDSVKKLSANGQRPIII 80
>UniRef50_A3H5S8 Cluster: Metallophosphoesterase; n=1; Caldivirga
maquilingensis IC-167|Rep: Metallophosphoesterase -
Caldivirga maquilingensis IC-167
Length = 405
Score = 38.7 bits (86), Expect = 0.18
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Frame = +3
Query: 216 SDIHLGFMEND-PVRGEDSFIAF----EEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMF 380
SD+HLG + R D AF E++ L + VD++L+ GDLFD +PS +
Sbjct: 7 SDVHLGRRQYGLEARARDYEAAFLNAISEIIKLREERGVDVVLVTGDLFDNPRPSPSTYL 66
Query: 381 KCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGS 560
IK FSR D LN ++ GNHD V
Sbjct: 67 TA----------------------IKGFSR---LRDSGLN----VIITRGNHDASVINPV 97
Query: 561 VSSLDILSITGLVNYFG-KWTDYTHVRI 641
+ + +LS +GLV Y + DY +RI
Sbjct: 98 DNPISVLSSSGLVKYLDLDYIDYGKLRI 125
>UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1;
Ignicoccus hospitalis KIN4/I|Rep: metallophosphoesterase
- Ignicoccus hospitalis KIN4/I
Length = 384
Score = 38.3 bits (85), Expect = 0.24
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 204 ILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
I+ A+D+HLG + R ED + AFE+++ ++ D +++ GDLFD P
Sbjct: 3 IVHAADVHLGKRQYGLKEREEDFYKAFEDLVEATIREKADALVIAGDLFDTPVP 56
>UniRef50_Q5XUC9 Cluster: Zona pellucida C related protein; n=4;
Danio rerio|Rep: Zona pellucida C related protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 552
Score = 38.3 bits (85), Expect = 0.24
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +3
Query: 156 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 335
++E+D+S W P D + S++ + + P + E + FE V L + D+ L
Sbjct: 393 VVEDDLSMWDPKD---FYLMSELDMKPVGGAPSKPEKPHLNFESVFDLPLNDQPDINLAP 449
Query: 336 GDLFDQAKPSVNCMFKCTEIIRK 404
+F+ AK +F+ E++ K
Sbjct: 450 EKVFESAKEKDETVFRQVEVVFK 472
>UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix
orenii H 168|Rep: Exonuclease SbcD - Halothermothrix
orenii H 168
Length = 435
Score = 38.3 bits (85), Expect = 0.24
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
LRIL +D HLG R E+ EE++ +A VD++L+ GD+FD P
Sbjct: 27 LRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTNP 81
>UniRef50_Q897Z1 Cluster: Exonuclease sbcD; n=2; Clostridium|Rep:
Exonuclease sbcD - Clostridium tetani
Length = 391
Score = 37.9 bits (84), Expect = 0.31
Identities = 41/182 (22%), Positives = 81/182 (44%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++I+ D H+G + N+ ED I E+++++ + + +++ GDL+D++ P V
Sbjct: 1 MKIIHTGDWHIGKIVNEFSMIEDQKIVLEQLINIIKEEKPNALIIAGDLYDRSIPPVE-- 58
Query: 378 FKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 557
++ELL + F++ + L++ PIL+I GNHD P +
Sbjct: 59 -----------------AVELLD---RTFNKIL------LDLKVPILAIAGNHDSP--ER 90
Query: 558 SVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEK 737
IL+ GL + G + I V+L+ Y L + + + +F +
Sbjct: 91 LAFGSRILTENGL-HIAGSFNKEKR-EIKKVILKSNNENFNFYLLPYCDPKEIKHIFQDD 148
Query: 738 KV 743
K+
Sbjct: 149 KI 150
>UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1;
Symbiobacterium thermophilum|Rep: DNA repair exonuclease
- Symbiobacterium thermophilum
Length = 411
Score = 37.9 bits (84), Expect = 0.31
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+RIL +D HLG R E+ +E+ ++ + +DL+L+ GD+FD PS
Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGNPS 56
>UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1;
Metallosphaera sedula DSM 5348|Rep:
Metallophosphoesterase - Metallosphaera sedula DSM 5348
Length = 379
Score = 37.9 bits (84), Expect = 0.31
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 204 ILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
IL SD HLG N R +D + F +++ LA++ V I+ GDLFD KP
Sbjct: 2 ILHISDTHLGSRRYNRDSREQDVYDVFSQLIDLAIREHVRAIVHSGDLFDVYKP 55
>UniRef50_Q3ICS5 Cluster: Exonuclease sbcCD subunit D; n=2;
Alteromonadales|Rep: Exonuclease sbcCD subunit D -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 415
Score = 37.5 bits (83), Expect = 0.41
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV--- 368
+++L SD HLG + R + F +L+ V+ +DL+L+ GD++ A PS
Sbjct: 1 MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE 60
Query: 369 NCMFKCTEIIRKYC 410
N +++ + +K C
Sbjct: 61 NQLYQFIKDAKKQC 74
>UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein;
n=11; Bacillus cereus group|Rep: DNA repair exonuclease
family protein - Bacillus anthracis
Length = 432
Score = 37.5 bits (83), Expect = 0.41
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 261 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 434
+ +F +FE ++ A+Q VD +LL GDL+D S+ E +++ D PV I
Sbjct: 54 QSTFESFERIIDKAIQERVDFVLLAGDLYDAETRSLRAQVFVREQMKRLSQYDIPVFI 111
>UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Nuclease SbcCD, D
subunit - Anaeromyxobacter sp. Fw109-5
Length = 386
Score = 37.5 bits (83), Expect = 0.41
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
LRIL SD HLG ++ ED A E + + + D +L+ GD+FD+A P
Sbjct: 8 LRILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDRAVP 62
>UniRef50_A6Q875 Cluster: DNA double-strand break repair protein;
n=1; Sulfurovum sp. NBC37-1|Rep: DNA double-strand break
repair protein - Sulfurovum sp. (strain NBC37-1)
Length = 373
Score = 37.5 bits (83), Expect = 0.41
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGE-------DSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 356
++I+ SD HLGF + D E D + AFE+V++ + D + GDLF +A
Sbjct: 1 MKIIHFSDTHLGFSDLDITNEEGINQREADFYKAFEDVINAIIDSRPDYAIHTGDLFHRA 60
Query: 357 KPSVNCM-FKCTEIIR 401
PS + F T++ R
Sbjct: 61 SPSNRAITFALTQLKR 76
>UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 380
Score = 37.5 bits (83), Expect = 0.41
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++++ SD+HLG ND ED E+L + + D +L+ GD++D++ PS +
Sbjct: 1 MKLIHLSDLHLGKRVNDFSMLEDQQYILAEILQIIDREKPDGVLIAGDVYDKSVPSAEAV 60
>UniRef50_Q8TNC7 Cluster: Phosphoesterase; n=2; Methanosarcina|Rep:
Phosphoesterase - Methanosarcina acetivorans
Length = 443
Score = 37.5 bits (83), Expect = 0.41
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Frame = +3
Query: 195 TLRILIASDIHL-----GFMENDPVRGED----SFIAFEEVLSLAVQCDVDLILLGGDLF 347
TL + A+D+HL G D GE +F A+E ++ L ++ +VD +L+ GD++
Sbjct: 21 TLSFVHAADLHLDSPFVGISGIDQELGERLAKATFQAYEAIIELCMEEEVDFLLIAGDVY 80
Query: 348 DQAKPSVNCMFKCTEIIRK 404
D A ++ + E +RK
Sbjct: 81 DSADKNLYAQVRFIEGLRK 99
>UniRef50_Q2B178 Cluster: DNA repair exonuclease family protein;
n=1; Bacillus sp. NRRL B-14911|Rep: DNA repair
exonuclease family protein - Bacillus sp. NRRL B-14911
Length = 406
Score = 31.9 bits (69), Expect(2) = 0.53
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 261 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPV 428
E +F A + ++ A+ VD ++L GDLFD S+ + + + + + PV
Sbjct: 34 ESTFAALKNIVDAALARKVDFVILAGDLFDGEDRSIKAQARLRKEMNRLAEKNIPV 89
Score = 24.2 bits (50), Expect(2) = 0.53
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 510 PILSIHGNHDDPVGQGSVSSL 572
P+ ++HGNHD G S SL
Sbjct: 88 PVYAVHGNHDHFEGTWSHISL 108
>UniRef50_Q8Y6N8 Cluster: Lmo1646 protein; n=12; Listeria|Rep:
Lmo1646 protein - Listeria monocytogenes
Length = 374
Score = 37.1 bits (82), Expect = 0.55
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 198 LRILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
++ L +D+HLG + + E +I ++ +A + VD ++L GDL+D+A P +
Sbjct: 1 MKFLHTADLHLGKIVSGVSMLAEQEYI-LTQITQIAEEEQVDALILAGDLYDRAVPPADA 59
Query: 375 MFKCTEIIRKY 407
+ +I+ K+
Sbjct: 60 VKVLNDILVKW 70
>UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1;
Clostridium phytofermentans ISDg|Rep: Nuclease SbcCD, D
subunit - Clostridium phytofermentans ISDg
Length = 375
Score = 37.1 bits (82), Expect = 0.55
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
++ + SD+H+G N+ ED +++L LA + D +L+ GD++D+ P++
Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTI 57
>UniRef50_A0LM47 Cluster: Nuclease SbcCD, D subunit; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nuclease SbcCD, D
subunit - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 383
Score = 37.1 bits (82), Expect = 0.55
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+RIL +D HLG + + D + ++ LA + D++L+ GD++D+A P + +
Sbjct: 1 MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV 60
Query: 378 FKCTEIIRKYCLG 416
+ + + LG
Sbjct: 61 ALLDDTLSRLVLG 73
>UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2;
Thermoplasmatales|Rep: DNA repair protein - Picrophilus
torridus
Length = 370
Score = 37.1 bits (82), Expect = 0.55
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
+R + SD HLG+ + E+ F AF E + + + VD + GDLFD PS
Sbjct: 2 VRFIHFSDTHLGYKQYMMDERENDFYEAFNEAIDIGINEHVDFFVHSGDLFDTWLPSNRA 61
Query: 375 M 377
M
Sbjct: 62 M 62
>UniRef50_P62132 Cluster: DNA double-strand break repair protein
mre11; n=1; Nanoarchaeum equitans|Rep: DNA double-strand
break repair protein mre11 - Nanoarchaeum equitans
Length = 361
Score = 37.1 bits (82), Expect = 0.55
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 204 ILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
I SD+HLG N E S+ A ++ ++ DL+L+GGD+FD+ K S
Sbjct: 2 IAFISDLHLGNIYANKKETEEHSYNALAKIEEKLLEYQPDLVLVGGDIFDKNKVS 56
>UniRef50_A5ZTK8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 405
Score = 36.7 bits (81), Expect = 0.72
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Frame = +3
Query: 216 SDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 392
SD+H+G + N +R + +I +E+ LA + D +++ GD++D+A PS + E
Sbjct: 30 SDLHIGLKLMNRDLREDQEYI-LDEITELARRKRPDAVVIAGDIYDKAVPSA----EAVE 84
Query: 393 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 572
+ + +G E + D + + P +N +LS G + VGQ +
Sbjct: 85 VFDHFLVG----LTEAVPDAVIMMISGNHDSAPRVNCFRKVLS--GQNIYMVGQPPRTES 138
Query: 573 DILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEME 752
+ + L + +G+ Y + P ++ K + + G + ++ L RL +K+ +
Sbjct: 139 EYIEKVTLNDAYGEVNFYLLPFVKPSMV-KQVVGVDENGNNLSYNETLHRLIGREKINSD 197
>UniRef50_A1S175 Cluster: Metallophosphoesterase precursor; n=1;
Thermofilum pendens Hrk 5|Rep: Metallophosphoesterase
precursor - Thermofilum pendens (strain Hrk 5)
Length = 706
Score = 29.1 bits (62), Expect(2) = 0.88
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 462 FSRTVNYEDPNLNISYPILSIHGNHDDP 545
+++ V+YE L S+PI ++ GNHD P
Sbjct: 201 YAQAVSYEQAFL-YSFPIFAVPGNHDHP 227
Score = 26.2 bits (55), Expect(2) = 0.88
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 159 IENDISAW---SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLIL 329
+E S W S LRI+ SD H G + D + G+ + A V SL DL++
Sbjct: 131 VEMPRSVWVLPSTPTKLRIVHVSDQHYGAGQPDVITGDMNRFAGYLVASL---LGPDLVI 187
Query: 330 LGGDLFDQA 356
GD+ D A
Sbjct: 188 DTGDIADTA 196
>UniRef50_Q830T2 Cluster: Exonuclease SbcD; n=3;
Lactobacillales|Rep: Exonuclease SbcD - Enterococcus
faecalis (Streptococcus faecalis)
Length = 378
Score = 36.3 bits (80), Expect = 0.95
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +3
Query: 276 AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
AFE++L++A + VD +++ GDL+D++ P+V +
Sbjct: 27 AFEQILAIAKEEQVDAVVIAGDLYDRSVPAVEAV 60
>UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=2;
Geobacter|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 376
Score = 36.3 bits (80), Expect = 0.95
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 198 LRILIASDIHLG-----FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 350
+R L +D+HL F + R D F+ +++LA++ +VD IL+ GDLFD
Sbjct: 3 IRFLHTADLHLDSPLRTFGDLARERRRDFLKTFDRIVNLAIKREVDCILIAGDLFD 58
>UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Metallophosphoesterase -
Moorella thermoacetica (strain ATCC 39073)
Length = 374
Score = 36.3 bits (80), Expect = 0.95
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = +3
Query: 201 RILIASDIHLGFMEN--DPVRGEDSFIAFEEVLSLAVQCDVD------LILLGGDLFDQA 356
R+L +D+HLG+ + PVR E+ + A VL AV +D L+L+ GDLFD
Sbjct: 3 RVLHLADLHLGYRPDLPAPVR-EEVYRARNRVLQAAVDLALDPRQGISLVLIAGDLFDNH 61
Query: 357 KPSVN 371
+P +
Sbjct: 62 RPEAS 66
>UniRef50_Q3ADJ2 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: Ser/Thr protein phosphatase family protein -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 331
Score = 35.9 bits (79), Expect = 1.3
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIA-----FEEVLSLAVQCDVDLILLGGDLFDQAKP 362
+R L +D H F N P D F EEV+ +A V+ +L GGDLF+ P
Sbjct: 1 MRFLYITDTH--FRGNSPQNRMDDFPQTLRKKMEEVVQVAQDLQVEAVLHGGDLFEIPNP 58
Query: 363 SVN 371
+VN
Sbjct: 59 AVN 61
>UniRef50_A0P1W8 Cluster: Putative DNA repair exonuclease; n=1;
Stappia aggregata IAM 12614|Rep: Putative DNA repair
exonuclease - Stappia aggregata IAM 12614
Length = 392
Score = 35.9 bits (79), Expect = 1.3
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = +3
Query: 198 LRILIASDIHLGF------MENDPVRG---EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 350
+R+L ++DIHLG M N + + + AF + LA+ VD ++L GD+FD
Sbjct: 1 MRLLASADIHLGSPIRSAAMRNPELGDRLKQATRNAFIRTVDLAISESVDALVLAGDIFD 60
Query: 351 QAKPSV-NCMFKCTEIIR 401
+ +P + C F ++ R
Sbjct: 61 KDQPDLKTCAFLLAQLTR 78
>UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3;
Thermotoga|Rep: Exonuclease, putative - Thermotoga
maritima
Length = 385
Score = 35.5 bits (78), Expect = 1.7
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +3
Query: 198 LRILIASDIHLG---FMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLF-DQAKP 362
L+IL SD HLG + + PV R E+ A ++V+ A + +VDLILL GDL + P
Sbjct: 7 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNP 66
Query: 363 SVNCMFKCTEIIRK 404
SV + + +++
Sbjct: 67 SVVALHDLLDYLKR 80
>UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=6;
Bacteria|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 418
Score = 35.5 bits (78), Expect = 1.7
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +3
Query: 456 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYF-GKWTDYTH 632
+ F+RT+ P N P +++ GNHD + S+S ++ LS G ++ T+
Sbjct: 65 RTFARTIETLQPLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQMGYIHLLRPSRTETGG 124
Query: 633 VRISPVLLQKGL------TRLALYGLSHLKDQ 710
R SP ++G+ + +YGL ++ Q
Sbjct: 125 YRFSPFDYEQGMGGHIEVNGVNIYGLGYIGTQ 156
>UniRef50_Q3W6X0 Cluster: Exonuclease SbcD; n=3;
Actinomycetales|Rep: Exonuclease SbcD - Frankia sp.
EAN1pec
Length = 387
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
++ L SD HLG R ++ E++ +A + +VD +L+ GD++D A P
Sbjct: 1 MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAP 55
>UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus
oeni|Rep: DNA repair exonuclease - Oenococcus oeni
(strain BAA-331 / PSU-1)
Length = 413
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 267 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+F AF V+ LAV VD +L GDLFD ++ S
Sbjct: 45 TFTAFSNVIKLAVDRHVDFVLFPGDLFDSSQQS 77
>UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus
thermophilus|Rep: Exonuclease SbcD - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 372
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+R+L +D HLG + R + A ++L L VDL+++ GDLFD+ + S
Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVS 56
>UniRef50_A5EW10 Cluster: Exonuclease SbcD; n=1; Dichelobacter
nodosus VCS1703A|Rep: Exonuclease SbcD - Dichelobacter
nodosus (strain VCS1703A)
Length = 396
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
++IL ++D HLG + R + + L + D++LL GD+FD A P V+
Sbjct: 1 MKILHSADWHLGAKLHGQSRESEQQAFLDWFLETLARVQPDILLLAGDIFDTATPPVS 58
>UniRef50_A1R7R7 Cluster: Putative nuclease SbcCD, D subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative nuclease SbcCD,
D subunit - Arthrobacter aurescens (strain TC1)
Length = 396
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 198 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+R+L SD HLG F + + +F+ ++++SL VD++L+ GD++D+A P ++
Sbjct: 1 MRLLHTSDWHLGRSFHGVGMLDAQRNFV--DQLVSLVQSKSVDVVLIAGDVYDRALPGLD 58
>UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilum
pendens Hrk 5|Rep: Metallophosphoesterase - Thermofilum
pendens (strain Hrk 5)
Length = 391
Score = 35.1 bits (77), Expect = 2.2
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 192 DTLRILIASDIHLG--FMENDPV---RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 356
+ LRI+ +D HL F P R ED AF V+ AV+ L L+ GDLFD
Sbjct: 2 EVLRIVHTADNHLDPKFTFLGPKVRDRREDFLNAFRRVVDFAVEAKPHLFLVSGDLFDSV 61
Query: 357 KP 362
P
Sbjct: 62 NP 63
>UniRef50_A4J7M8 Cluster: Metallophosphoesterase; n=1;
Desulfotomaculum reducens MI-1|Rep:
Metallophosphoesterase - Desulfotomaculum reducens MI-1
Length = 453
Score = 31.9 bits (69), Expect(2) = 2.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 198 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
L+ + SDIHLG + ED A ++ +A++ VD +L+ GDL+D PS+
Sbjct: 4 LKFIHCSDIHLGRQRLGGKLPDEDFARALGYIVQVALEQRVDGLLVAGDLYD--SPSI 59
Score = 21.8 bits (44), Expect(2) = 2.6
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 468 RTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSS-LDILSITGLVN 602
+ +N P + PI I GNHD G + + L+ GLV+
Sbjct: 66 QAINCLMPLQEANIPIFIIEGNHDRATVTGETHTWVRYLNDIGLVH 111
>UniRef50_UPI00015C5C4B Cluster: hypothetical protein CKO_02773;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_02773 - Citrobacter koseri ATCC BAA-895
Length = 449
Score = 34.7 bits (76), Expect = 2.9
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
+RIL SD HLG R + + +L A VD I++ GD+FD P
Sbjct: 48 MRILHTSDWHLGQNFYSKSRAAEHLAFLDWLLETAQSHQVDAIIVAGDIFDTGSP 102
>UniRef50_Q9RT45 Cluster: Exonuclease SbcD, putative; n=2;
Deinococcus|Rep: Exonuclease SbcD, putative -
Deinococcus radiodurans
Length = 416
Score = 34.7 bits (76), Expect = 2.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+R+L +D H G + R + A E+ LA D +L+ GDLFD PS +
Sbjct: 24 MRVLHTADFHAGRLLKGFDRTPEIHDALVEIAGLARTERADAVLVSGDLFDTGNPSAD 81
>UniRef50_Q8EP66 Cluster: Exonuclease; n=13; Bacillaceae|Rep:
Exonuclease - Oceanobacillus iheyensis
Length = 388
Score = 34.7 bits (76), Expect = 2.9
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++I +D HLG + ED + ++ + D++++ GDL+D+A P V+ +
Sbjct: 1 MKIFHTADWHLGKLVQGIYMTEDQNYILNQFVAEVEREQPDVVIIAGDLYDRAVPPVDAV 60
Query: 378 FKCTEIIRKYCLG 416
+I+ K G
Sbjct: 61 HLLDQILDKIIHG 73
>UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative DNA
repair exonuclease; n=1; Pirellula sp.|Rep: Probable
phosphoesterase yhaO-putative DNA repair exonuclease -
Rhodopirellula baltica
Length = 431
Score = 34.7 bits (76), Expect = 2.9
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +3
Query: 201 RILIASDIHLGF-------MENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 353
RIL A+DIHL E+ PV E S A E + LA++ VDL+++ GDL+D
Sbjct: 5 RILHAADIHLDSPLQKLDAYEDAPVDEIREASRRALENMTDLAIEEQVDLVVIAGDLYDG 64
Query: 354 AKPSVN 371
P N
Sbjct: 65 DWPDQN 70
>UniRef50_Q5P494 Cluster: Exonuclease SbcD; n=1; Azoarcus sp.
EbN1|Rep: Exonuclease SbcD - Azoarcus sp. (strain EbN1)
(Aromatoleum aromaticum (strain EbN1))
Length = 426
Score = 34.7 bits (76), Expect = 2.9
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+R+L SD HLG +D R + + +L+L D++L+ GD+FD A PS
Sbjct: 1 MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPS 56
>UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1;
Lactobacillus sakei subsp. sakei 23K|Rep: Putative
metallo-phosphoesterase - Lactobacillus sakei subsp.
sakei (strain 23K)
Length = 397
Score = 34.7 bits (76), Expect = 2.9
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 261 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
E +F AFE+++ A+ VD +LL GD FDQ S+
Sbjct: 31 ESTFTAFEKLVQTAIDEAVDFVLLVGDSFDQEAQSL 66
>UniRef50_A5WEF9 Cluster: Nuclease SbcCD, D subunit; n=3;
Psychrobacter|Rep: Nuclease SbcCD, D subunit -
Psychrobacter sp. PRwf-1
Length = 537
Score = 34.7 bits (76), Expect = 2.9
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 159 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQ-CDVDLILLG 335
+ N S P L IL SD HLG +R + F AF L+ +Q VD++++
Sbjct: 1 MSNSTSLSHPPKPLTILHTSDWHLGRRLYGQLRYHE-FEAFLAWLTQTLQQYQVDVLIVA 59
Query: 336 GDLFDQAKPS 365
GD+FD PS
Sbjct: 60 GDVFDTMTPS 69
>UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 283
Score = 34.7 bits (76), Expect = 2.9
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 171 ISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 350
I++ + ++ +I+ D HL + N+ + F+A E+ + I+ +
Sbjct: 91 INSKNKEEKKKIITFDDEHLNYRLNN-----NKFLA--ELKDKISDMPNEYIISNEETLH 143
Query: 351 QAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHG 530
V+ II KY +K S E LS+++ NF ++ +NIS I +
Sbjct: 144 IGTKKVDSYLNKISIIDKYIDKNKAYSQEELSNELNNFFNNFYLQNFQINISQDIFKAND 203
Query: 531 NHDDPV-GQGSVSS 569
N + P+ G+V+S
Sbjct: 204 NENQPIHDDGTVTS 217
>UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillus
licheniformis (strain DSM 13 / ATCC 14580)
Length = 414
Score = 34.3 bits (75), Expect = 3.8
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 267 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIEL 440
+F + E V LA+ D ILL GDLFD+A S+ K +RK L K +I++
Sbjct: 42 TFKSAENVFKLAIDEQADFILLAGDLFDEANRSL----KAQMFLRKQFLKLKENNIQV 95
>UniRef50_Q2IN32 Cluster: Nuclease SbcCD, D subunit; n=2;
Myxococcaceae|Rep: Nuclease SbcCD, D subunit -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 428
Score = 34.3 bits (75), Expect = 3.8
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
LRIL +D HLG + RG + F+A+ +L A VD +++ GD+FD A P
Sbjct: 14 LRILHTADWHLGHALHGVDRGPEHERFVAW--LLDTAEAEAVDAVIVAGDVFDAANP 68
>UniRef50_Q1NCL0 Cluster: Nuclease SbcCD, D subunit; n=1;
Sphingomonas sp. SKA58|Rep: Nuclease SbcCD, D subunit -
Sphingomonas sp. SKA58
Length = 410
Score = 34.3 bits (75), Expect = 3.8
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +3
Query: 201 RILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
R++ +SD H+G ++ ++F+++ +L V + DL+L+ GD++D A P V+
Sbjct: 9 RLIHSSDWHIGHELFSHEREAEHEAFLSW--LLDRLVAEEADLLLVTGDIYDVANPPVSA 66
Query: 375 MFKCTEIIR 401
M + +R
Sbjct: 67 MARLYAFLR 75
>UniRef50_A5IKC9 Cluster: Putative uncharacterized protein; n=1;
Thermotoga petrophila RKU-1|Rep: Putative
uncharacterized protein - Thermotoga petrophila RKU-1
Length = 809
Score = 34.3 bits (75), Expect = 3.8
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 612 KWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFA 731
+W+ YT + ISP LL+KG T + G S LK Q LS + A
Sbjct: 368 EWSGYTGIYISPDLLEKGYTEVLNGGFS-LKLQNLSEMSA 406
>UniRef50_A3WLK0 Cluster: Exonuclease SbcD, putative; n=1;
Idiomarina baltica OS145|Rep: Exonuclease SbcD, putative
- Idiomarina baltica OS145
Length = 382
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
++IL SD HLG + + E ++++ + Q VD +++ GD++D++ P
Sbjct: 1 MKILHTSDWHLGRLFHQQSLLEQQIELLQQIVEIIDQQAVDAVIIAGDIYDRSVP 55
>UniRef50_Q54NN5 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 366
Score = 34.3 bits (75), Expect = 3.8
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Frame = +3
Query: 195 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
+ +I+ SDIH + P+R DSF+ ++V++ + DLIL+ GDL ++ +
Sbjct: 67 SFKIVQLSDIHYDKL---PLRISDSFL--QKVINSTNALNPDLILITGDLVERDPEPITQ 121
Query: 375 MFK--CTEIIRKY----CLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 515
++K +++ KY LG+ L + IKN + N +I YP+
Sbjct: 122 LYKKHLSQLKSKYGIYAILGNHDYKTTLGPEIIKNALKNTNITLLENDIVYPM 174
>UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 430
Score = 34.3 bits (75), Expect = 3.8
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 381 KCTEIIR-KYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 557
KC ++ + L + + +E L + K+ + N E NL+ISY S+H H +G
Sbjct: 76 KCQNLVDLELILRNTEIKLENLKNIYKDLEKLTNIEKLNLDISYNTFSLHAEHKYMMGID 135
Query: 558 SVSSLDILSIT 590
++L S++
Sbjct: 136 KCTNLVSFSLS 146
>UniRef50_A2F419 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 425
Score = 34.3 bits (75), Expect = 3.8
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Frame = +3
Query: 339 DLFDQAKPSVNCMFKCTEIIRKYCLGDKPVS--IELLS----DQ-IKNFSRTVNYEDP-- 491
D+FD K ++ CTE+ K+ GDK ++ +ELL+ DQ IK F+ V + D
Sbjct: 223 DVFDALKEIISN--NCTELFEKFIFGDKFLNFLLELLNSDKKDQAIKMFATMVYFGDSTI 280
Query: 492 ----NLNISYPILSIHGNHDDPVGQGSVSSLDILSIT 590
NL+I IL + + ++ V + S D LSI+
Sbjct: 281 EIFNNLHIIEKILELTNDENESVQFNAFSFFDALSIS 317
>UniRef50_A6CK39 Cluster: Exonuclease; n=3; Bacillaceae|Rep:
Exonuclease - Bacillus sp. SG-1
Length = 381
Score = 29.1 bits (62), Expect(2) = 4.5
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++ + +D HLG + + E + ++L + D +++ GDL+D++ P +
Sbjct: 1 MKFIHTADWHLGKLVHGIYMTEQQREVLYQFVNLVEEEKPDAVVIAGDLYDRSVPPTEAV 60
Query: 378 FKCTEIIRK 404
EI+ K
Sbjct: 61 ELLDEILYK 69
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 492 NLNISYPILSIHGNHD 539
N+ + P+++I GNHD
Sbjct: 71 NVELETPVIAISGNHD 86
>UniRef50_Q03QD8 Cluster: DNA repair exonuclease; n=1; Lactobacillus
brevis ATCC 367|Rep: DNA repair exonuclease -
Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Length = 404
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 261 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 434
+ +F A +V A+ VD ++L GDLFD+++ SV E + L + PV +
Sbjct: 31 QSTFAAVTKVFDRAISEHVDFVVLAGDLFDRSEQSVAAQAYLFEQFDRLRLANIPVFV 88
>UniRef50_A6WB40 Cluster: Metallophosphoesterase; n=1; Kineococcus
radiotolerans SRS30216|Rep: Metallophosphoesterase -
Kineococcus radiotolerans SRS30216
Length = 515
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +3
Query: 216 SDIHLGFME---NDPVRG-----EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+D HLG+ + P G D ++++ V+ + +VDL++ GGD F Q+ PS+
Sbjct: 12 ADAHLGYAARCGSHPASGLNHRVRDGYLSYRAVVRDMIAKEVDLVIDGGDTFHQSHPSIG 71
Query: 372 CM 377
+
Sbjct: 72 AI 73
>UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16;
Staphylococcus|Rep: Metallophosphoesterase -
Staphylococcus aureus subsp. aureus JH9
Length = 398
Score = 33.9 bits (74), Expect = 5.1
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +3
Query: 261 EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 350
+ ++ +F+ ++ +A+Q DVD +++ GDLFD
Sbjct: 32 KSAYESFKNIVDIALQQDVDFVIIAGDLFD 61
>UniRef50_A1SK69 Cluster: Nuclease SbcCD, D subunit; n=2;
Actinomycetales|Rep: Nuclease SbcCD, D subunit -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 386
Score = 33.9 bits (74), Expect = 5.1
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 198 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 371
+RIL SD HLG F + + +++ + +L + + VDL+++ GD++D+A P V+
Sbjct: 1 MRILHTSDWHLGRSFHREGMLGHQAAYV--DHLLEVVERERVDLVVVAGDVYDRALPHVD 58
Query: 372 CMFKCTEIIRK 404
+ E + +
Sbjct: 59 AVRLADETLAR 69
>UniRef50_A1K1W1 Cluster: Exonuclease SbcD, putative; n=4;
Betaproteobacteria|Rep: Exonuclease SbcD, putative -
Azoarcus sp. (strain BH72)
Length = 381
Score = 33.9 bits (74), Expect = 5.1
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
+R L +D HLG + + ED + + LA + D IL+ GD++D++ P + +
Sbjct: 1 MRFLHTADWHLGRVYHGVSLLEDQAHVLRDFVRLAGETRPDAILIAGDVYDRSVPPADAV 60
Query: 378 FKCTEIIRKYCLG 416
E + + +G
Sbjct: 61 RLLDETLTELVVG 73
>UniRef50_Q552H6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 468
Score = 33.9 bits (74), Expect = 5.1
Identities = 24/119 (20%), Positives = 56/119 (47%)
Frame = +3
Query: 150 KIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLIL 329
K ++ N + + +I+L M + R +++ +F++ +L + ++ +
Sbjct: 208 KAIVANSFIKFKSKHLQQFAFRKNINLYIMPKEMSRHKENTTSFKKPKNLLLW-RIEWLF 266
Query: 330 LGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNIS 506
L D F + PS+ ++++K+ D PV+I L + +K + +Y +PN N +
Sbjct: 267 LDDD-FKWSDPSIQDSMIMNDLLQKHI--DDPVNIYNLKNNLKKLNSNRDYRNPNENFT 322
>UniRef50_Q3IPC0 Cluster: Putative uncharacterized protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 441
Score = 33.9 bits (74), Expect = 5.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Frame = +3
Query: 195 TLRILIASDIHLGFM-------ENDPVRGEDSFI--AFEEVLSLAVQCDVDLILLGGDLF 347
T+R L +D+HLG + DS I A E + A++ DVD +++ GDL+
Sbjct: 2 TVRFLHTADLHLGSQLKTQHRQATGTIETLDSAIYTAVERLFDTAIEEDVDFVVIAGDLY 61
Query: 348 DQAKPSV 368
D+ SV
Sbjct: 62 DEDSRSV 68
>UniRef50_Q1VZW8 Cluster: Exonuclease SbcD; n=1; Psychroflexus
torquis ATCC 700755|Rep: Exonuclease SbcD -
Psychroflexus torquis ATCC 700755
Length = 403
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+RIL +D H+G + +D + + + + D+D++L+ GD+FD + PS
Sbjct: 1 MRILHTADWHIGKKLHKKELYQDFDLFIDWMCQFLPENDIDILLVSGDVFDFSNPS 56
>UniRef50_A7DFW6 Cluster: Nuclease SbcCD, D subunit; n=3;
Alphaproteobacteria|Rep: Nuclease SbcCD, D subunit -
Methylobacterium extorquens PA1
Length = 415
Score = 33.5 bits (73), Expect = 6.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 365
+R+L D H+G R + F + S+ V+ +VD +++ GD+FD PS
Sbjct: 2 IRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPS 57
>UniRef50_A3YYZ0 Cluster: Putative exonuclease; n=1; Synechococcus
sp. WH 5701|Rep: Putative exonuclease - Synechococcus
sp. WH 5701
Length = 396
Score = 33.5 bits (73), Expect = 6.7
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 362
+R+L SD HLG + ++ +++LA VD +L+ GDL+D+A P
Sbjct: 1 MRLLHTSDWHLGRSFHGASLLQEQAEVLARIVALARDGVVDAVLIAGDLYDRAIP 55
>UniRef50_A3I3N6 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 404
Score = 33.5 bits (73), Expect = 6.7
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 267 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 434
+F AF++++ A+Q D +L+ GD++D S+ K E + K + PV I
Sbjct: 36 TFDAFDKIIQKAIQEQPDFLLIVGDIYDGENRSLQAQRKFQEAMEKLFQHNIPVII 91
>UniRef50_Q23MC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1306
Score = 33.5 bits (73), Expect = 6.7
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 339 DLFDQAKPSVNCMFKCTEIIRKY-CLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 515
DL D KP N + K I + C D+P SI + S+ KN + ++ + N+ PI
Sbjct: 781 DLIDLKKPKQNNISKNRSISSELECHFDEPNSINIFSNNSKNQLHATSQKNFSSNLIPPI 840
Query: 516 LSIHGN 533
++ H N
Sbjct: 841 INSHEN 846
>UniRef50_A0BB93 Cluster: Chromosome undetermined scaffold_1, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_1,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 110
Score = 33.5 bits (73), Expect = 6.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 309 CDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVS----IELLSDQIKNFSRTV 476
CD+ L + ++ DQ++ + KC I KYC+ +S I+LL D F+
Sbjct: 12 CDISLSQIE-NMLDQSE--IEPQTKCKNIETKYCINSTVISISNQIKLLGDDFSEFNVPS 68
Query: 477 NYEDPNLNI 503
+Y PN+ +
Sbjct: 69 HYLPPNIQV 77
>UniRef50_Q2K465 Cluster: Putative sensory box/GGDEF family protein;
n=2; Rhizobium|Rep: Putative sensory box/GGDEF family
protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
Length = 839
Score = 33.1 bits (72), Expect = 8.9
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -3
Query: 454 IWSDSNSILTGLSPRQYLRIISVHLNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKA 275
+W D+N + PR+ L L+ S + P +++ + C R K+ K
Sbjct: 5 LWPDANGLKRFQQPRRGLIFQRSREKAALSRE---SCAAQPVVLENLTKCLIRLKSIFKG 61
Query: 274 IKLSSPRTGSFSMKP 230
+ L SPRTG MKP
Sbjct: 62 LGLESPRTGKVWMKP 76
>UniRef50_A5VL00 Cluster: Metallophosphoesterase; n=2; Lactobacillus
reuteri|Rep: Metallophosphoesterase - Lactobacillus
reuteri F275
Length = 394
Score = 33.1 bits (72), Expect = 8.9
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 267 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
+F AF++++ A+ VD IL+ GD++D+ + S+
Sbjct: 33 TFTAFQKIVDDAIALKVDFILISGDIYDRDQQSI 66
>UniRef50_A5KQM8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 386
Score = 33.1 bits (72), Expect = 8.9
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = +3
Query: 198 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 377
++ + SD+H+G ED EEV+ + D +++ GD++D++ PS +
Sbjct: 1 MKFIHLSDLHIGKHLYHYNMKEDQEHILEEVIGYTEKLRPDAVVIAGDIYDKSVPSAEAV 60
Query: 378 FKCTEIIRKYCLGDKPVSIELLS 446
+ + + VSI +++
Sbjct: 61 AVFDDFLTRLSSVSPQVSILIIA 83
>UniRef50_A3S327 Cluster: Possible general (Type II) secretion
pathway protein D; n=1; Prochlorococcus marinus str. MIT
9211|Rep: Possible general (Type II) secretion pathway
protein D - Prochlorococcus marinus str. MIT 9211
Length = 560
Score = 33.1 bits (72), Expect = 8.9
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +3
Query: 528 GNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKD 707
G P+G +V + I S G V+ G T T V+ SP+ L+R+A YG H+KD
Sbjct: 55 GPQAPPLGGMAVGEIFINS-RGFVDLEGPKTTITLVKASPIDSLLTLSRIANYGFLHVKD 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,140,019
Number of Sequences: 1657284
Number of extensions: 16033535
Number of successful extensions: 37949
Number of sequences better than 10.0: 148
Number of HSP's better than 10.0 without gapping: 36507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37848
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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