Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D21
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z72511-9|CAA96661.2| 223|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical ... 29 5.4
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 28 7.2
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 199 bits (486), Expect = 2e-51
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 5/209 (2%)
Frame = +3
Query: 189 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 368
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGDLF + PS
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122
Query: 369 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 536
+ T+++R+YCL P+++E LSD NF+++ VNY D NLN+ PI +IHGNH
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNH 182
Query: 537 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 716
DD G+G +++LD+L +GLVN FGK ++ +SP+LL+KG TRLALYG+ +D RL
Sbjct: 183 DDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRL 241
Query: 717 SRLFAEKKVEMERPDE-TLDWFNLFVLHQ 800
R F + RP+ DWFNLFVLHQ
Sbjct: 242 VRAFKNNSISFLRPNAGAEDWFNLFVLHQ 270
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 205 ILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 89
+ +S+ H E S I+ + DY V SNN+N ++PIG
Sbjct: 786 VAEISAYHHGEQSLMGTIVNLAQDY-VGSNNINLLLPIG 823
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 205 ILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 89
+ +S+ H E S I+ + DY V SNN+N ++PIG
Sbjct: 786 VAEISAYHHGEQSLMGTIVNLAQDY-VGSNNINLLLPIG 823
>Z72511-9|CAA96661.2| 223|Caenorhabditis elegans Hypothetical
protein F55A11.8 protein.
Length = 223
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 273 IAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 374
+AFEEVL++ +VD + G D+F+ A V+C
Sbjct: 69 VAFEEVLTVQELNEVDAFIYGDDMFEYA--DVHC 100
>AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical
protein Y51H4A.1 protein.
Length = 214
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 382 LNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKAIKLS--SPRTGSFSM 236
+ I++ E + ++P S KSTS C + + S ++I+ S SPR SF +
Sbjct: 88 IQIKVPEVEEDTEKTPAGSPKSTSSCISSEILSEQSIEFSSISPRPSSFPL 138
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = -1
Query: 822 VSSVSMIFDVVQIN*TSPMFHRVSPFP-LFFQQKDVKVSDLLN-----G*VHRGRAS*DL 661
+S + M DVV+I S M H ++ FP + +Q + +D N V + +AS +
Sbjct: 338 MSRLQMFKDVVEIKVISKMTHSIADFPNQYLEQPPAEPTDEDNPAPWLKMVGQEKASSEA 397
Query: 660 FAKVLVIFLRACSRSIYQN 604
+ VIF C SI +N
Sbjct: 398 VTEEEVIFANKCDCSIPEN 416
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 393 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 572
+ ++YC P ++ ++ Q +F T +DP +SY +I +D S +S
Sbjct: 217 VFQRYC---PPGTVFNINQQSCDFQCTT--DDPTTTVSYSTSTITTPQEDDSEYSSTTSA 271
Query: 573 DILSIT 590
D++S T
Sbjct: 272 DVISTT 277
>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
protein C28A5.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 432 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 602
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570
>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
protein C28A5.1 protein.
Length = 1223
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 432 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 602
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,881,567
Number of Sequences: 27780
Number of extensions: 392311
Number of successful extensions: 899
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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