Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D18
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 246 2e-65
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 246 2e-65
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 244 5e-65
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 244 5e-65
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 217 1e-56
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 217 1e-56
AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine re... 29 3.3
Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 28 7.5
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 246 bits (601), Expect = 2e-65
Identities = 101/165 (61%), Positives = 133/165 (80%)
Frame = +2
Query: 329 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 508
Y ++VWRN+ LF LH+AA G Y +FHAKWQT +F++ LYV SG GITAGAHRLW+H
Sbjct: 42 YKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSH 101
Query: 509 KSYKAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 688
KSYKA P+R+ L++ N++A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWL
Sbjct: 102 KSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWL 161
Query: 689 LVRKHPELKRKGKGLDLSDLYADPILRFQKKYYLILMPIACFILP 823
LVRKHP++K G LDLSDL++DP+L FQ+K+Y L+ + CFILP
Sbjct: 162 LVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFILP 206
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 822 PTVIPVYFWNES 857
PT+IPVYFW E+
Sbjct: 206 PTIIPVYFWKET 217
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 246 bits (601), Expect = 2e-65
Identities = 101/165 (61%), Positives = 133/165 (80%)
Frame = +2
Query: 329 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 508
Y ++VWRN+ LF LH+AA G Y +FHAKWQT +F++ LYV SG GITAGAHRLW+H
Sbjct: 42 YKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSH 101
Query: 509 KSYKAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 688
KSYKA P+R+ L++ N++A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWL
Sbjct: 102 KSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWL 161
Query: 689 LVRKHPELKRKGKGLDLSDLYADPILRFQKKYYLILMPIACFILP 823
LVRKHP++K G LDLSDL++DP+L FQ+K+Y L+ + CFILP
Sbjct: 162 LVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFILP 206
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 822 PTVIPVYFWNES 857
PT+IPVYFW E+
Sbjct: 206 PTIIPVYFWKET 217
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 244 bits (598), Expect = 5e-65
Identities = 106/206 (51%), Positives = 147/206 (71%)
Frame = +2
Query: 206 SVK*QTNMAPNVKDANGVLFENDADTPDLGLSSTPVQQADNYPKKLVWRNIILFTYLHIA 385
+VK ++N+A ++ G + A P+ + + Y ++VWRN+ LF LH A
Sbjct: 2 TVKTRSNIAKKIEKDGGPETQYLAVDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFA 61
Query: 386 ALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKWPLRVILIIFNSL 565
A G Y +F AKWQT +F ++LYV G GITAGAHRLW+HKSYKA P+R+ L+I N++
Sbjct: 62 AAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNI 121
Query: 566 AFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLVRKHPELKRKGKGLDLSD 745
A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWLLVRKHP++K +G LD+SD
Sbjct: 122 ALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSD 181
Query: 746 LYADPILRFQKKYYLILMPIACFILP 823
L +DP+L FQ+K+Y L+ + CFILP
Sbjct: 182 LLSDPVLVFQRKHYFPLVILCCFILP 207
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 822 PTVIPVYFWNES 857
PT+IPVYFW E+
Sbjct: 207 PTIIPVYFWKET 218
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 244 bits (598), Expect = 5e-65
Identities = 106/206 (51%), Positives = 147/206 (71%)
Frame = +2
Query: 206 SVK*QTNMAPNVKDANGVLFENDADTPDLGLSSTPVQQADNYPKKLVWRNIILFTYLHIA 385
+VK ++N+A ++ G + A P+ + + Y ++VWRN+ LF LH A
Sbjct: 2 TVKTRSNIAKKIEKDGGPETQYLAVDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFA 61
Query: 386 ALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKWPLRVILIIFNSL 565
A G Y +F AKWQT +F ++LYV G GITAGAHRLW+HKSYKA P+R+ L+I N++
Sbjct: 62 AAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNI 121
Query: 566 AFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLVRKHPELKRKGKGLDLSD 745
A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWLLVRKHP++K +G LD+SD
Sbjct: 122 ALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSD 181
Query: 746 LYADPILRFQKKYYLILMPIACFILP 823
L +DP+L FQ+K+Y L+ + CFILP
Sbjct: 182 LLSDPVLVFQRKHYFPLVILCCFILP 207
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 822 PTVIPVYFWNES 857
PT+IPVYFW E+
Sbjct: 207 PTIIPVYFWKET 218
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 217 bits (529), Expect = 1e-56
Identities = 91/162 (56%), Positives = 122/162 (75%)
Frame = +2
Query: 338 KLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSY 517
++VW+N+ LF LHI AL G Y +F AKW T + ++L+ + +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 518 KAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLVR 697
KA RV L++ NS+AFQ+ +DWARDHR HHK+++TDADPH+ RG FF+H+GWLLV+
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 698 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILMPIACFILP 823
KH +LK +G LDLSDLY DP+L FQ+K YL L+ I CF LP
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALP 198
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 217 bits (529), Expect = 1e-56
Identities = 91/162 (56%), Positives = 122/162 (75%)
Frame = +2
Query: 338 KLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSY 517
++VW+N+ LF LHI AL G Y +F AKW T + ++L+ + +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 518 KAKWPLRVILIIFNSLAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLVR 697
KA RV L++ NS+AFQ+ +DWARDHR HHK+++TDADPH+ RG FF+H+GWLLV+
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 698 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILMPIACFILP 823
KH +LK +G LDLSDLY DP+L FQ+K YL L+ I CF LP
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALP 198
>AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine
receptor, class r protein6 protein.
Length = 410
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = -1
Query: 527 TLLCMIYVPIIYVHLL*CQVLTLHTIYRQIGLFAISHEIR 408
T++ +Y+ +++++LL C ++ + IY + ++S EIR
Sbjct: 187 TVIAPLYIAMVFINLLSCFIVAICLIYYFLVNLSLSREIR 226
>Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical
protein R10E4.9 protein.
Length = 202
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +2
Query: 347 WRNIILFTY-LHIAALYG-GYLFLFHAKWQTDLFAY 448
++N+ILF Y L + L+G G+L++FHA++ T F Y
Sbjct: 4 FKNMILFIYTLVLFILHGYGFLYIFHAEY-TSEFKY 38
>Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical
protein F19H6.4 protein.
Length = 243
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 425 WQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKWPLRVILI 550
W A+ ++ ++ +G A AH W +++ P R ILI
Sbjct: 198 WNLPALAFAIFTIANIGPRAVAHHKWYKETFPGYPPNRRILI 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,751,387
Number of Sequences: 27780
Number of extensions: 475017
Number of successful extensions: 1213
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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