Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D17
         (340 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X71129-1|CAA50441.1|  255|Homo sapiens electron transfer flavopr...    38   0.006
CR456827-1|CAG33108.1|  255|Homo sapiens ETFB protein.                 38   0.006
BC093963-1|AAH93963.1|  255|Homo sapiens electron-transfer-flavo...    38   0.006
BC093961-1|AAH93961.1|  255|Homo sapiens electron-transfer-flavo...    38   0.006
AF436663-1|AAN03713.1|  255|Homo sapiens electron transfer flavo...    38   0.006

>X71129-1|CAA50441.1|  255|Homo sapiens electron transfer
           flavoprotein beta subunit protein.
          Length = 255

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   VVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 97
           V+SVEDPP R AG  +   + LVAKLKE G +
Sbjct: 224 VISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255


>CR456827-1|CAG33108.1|  255|Homo sapiens ETFB protein.
          Length = 255

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   VVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 97
           V+SVEDPP R AG  +   + LVAKLKE G +
Sbjct: 224 VISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255


>BC093963-1|AAH93963.1|  255|Homo sapiens
           electron-transfer-flavoprotein, beta polypeptide,
           isoform 1 protein.
          Length = 255

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   VVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 97
           V+SVEDPP R AG  +   + LVAKLKE G +
Sbjct: 224 VISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255


>BC093961-1|AAH93961.1|  255|Homo sapiens
           electron-transfer-flavoprotein, beta polypeptide
           protein.
          Length = 255

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   VVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 97
           V+SVEDPP R AG  +   + LVAKLKE G +
Sbjct: 224 VISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255


>AF436663-1|AAN03713.1|  255|Homo sapiens electron transfer
           flavoprotein beta-subunit protein.
          Length = 255

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   VVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 97
           V+SVEDPP R AG  +   + LVAKLKE G +
Sbjct: 224 VISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,260,512
Number of Sequences: 237096
Number of extensions: 425367
Number of successful extensions: 544
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)