Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D15
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1577 - 38379951-38380167,38380349-38380543,38380919-383811...    29   5.6  
05_04_0379 + 20788286-20788705,20789626-20789778                       28   7.4  

>01_06_1577 -
           38379951-38380167,38380349-38380543,38380919-38381191,
           38381281-38381455,38381925-38382035,38382120-38382390,
           38382990-38383139,38383242-38384246
          Length = 798

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 632 EEEYPEYNTVDKRVERGRE*WPSPATKPEVDSEFDESSG 748
           EE++ E NTV+K VE   E  P P  K E    FD+++G
Sbjct: 101 EEKFSE-NTVEKPVESSEEKAP-PKEKEESKDTFDDANG 137


>05_04_0379 + 20788286-20788705,20789626-20789778
          Length = 190

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 783 FLLLAIVSHQTAPELSSNSESTS 715
           FLL+AI  H   P LSS+S S+S
Sbjct: 75  FLLMAIFEHLIKPSLSSSSSSSS 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,634,688
Number of Sequences: 37544
Number of extensions: 275431
Number of successful extensions: 503
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)