Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D14
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 104 7e-23
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 104 7e-23
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 76 3e-14
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 76 3e-14
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 75 8e-14
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 54 9e-08
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 54 9e-08
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 53 3e-07
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 51 8e-07
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 51 8e-07
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 49 5e-06
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 43 2e-04
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.026
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 35 0.060
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.18
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 32 0.42
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 32 0.42
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 32 0.42
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 32 0.42
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.97
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 31 0.97
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 5.2
Z67879-4|CAB54185.1| 297|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 28 9.0
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 28 9.0
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 104 bits (250), Expect = 7e-23
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +3
Query: 108 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX--FLPIYSQ 281
F++YD E GKID +GD+ RA PT A + +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 282 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 461
K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGV---E 129
Query: 462 DDDGMIPYAAFLKKVMA 512
D +GM+ Y F+KKV+A
Sbjct: 130 DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 104 bits (250), Expect = 7e-23
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +3
Query: 108 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX--FLPIYSQ 281
F++YD E GKID +GD+ RA PT A + +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 282 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 461
K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGV---E 129
Query: 462 DDDGMIPYAAFLKKVMA 512
D +GM+ Y F+KKV+A
Sbjct: 130 DGEGMVKYEDFIKKVLA 146
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 63 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 239
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 240 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 416
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 417 DSEVAEVTKDCMDPEDDDGMIPYAAFL 497
D EV E+ ++ D DG + Y F+
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNYEEFV 143
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 63 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 239
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 240 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 416
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 417 DSEVAEVTKDCMDPEDDDGMIPYAAFL 497
D EV E+ ++ D DG + Y F+
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNYEEFV 143
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 74.5 bits (175), Expect = 8e-14
Identities = 44/143 (30%), Positives = 71/143 (49%)
Frame = +3
Query: 81 NDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX 260
+D+ F+ +D +G +I +GD+LRAL NPT A I
Sbjct: 2 DDLADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFED- 60
Query: 261 FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 440
F+PI+ K++++ E+F+E L +DK NG++ AEL H L LGE+L D +V ++
Sbjct: 61 FVPIFQSVSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLL 120
Query: 441 KDCMDPEDDDGMIPYAAFLKKVM 509
D G + + F++ VM
Sbjct: 121 S---GHNDSHGNVNISDFVRAVM 140
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 71.3 bits (167), Expect = 7e-13
Identities = 41/143 (28%), Positives = 71/143 (49%)
Frame = +3
Query: 81 NDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX 260
+++E F ++D +G GKIDA + ++LR+L+ NP + +
Sbjct: 5 DNMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDKTARISFEN- 63
Query: 261 FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 440
FLP+ S + +K + EDF++ L +DK G + AEL L +G+KL D E ++
Sbjct: 64 FLPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLV 123
Query: 441 KDCMDPEDDDGMIPYAAFLKKVM 509
++D+G I F+K +M
Sbjct: 124 AG----QEDNGKIKIETFVKTIM 142
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 54.4 bits (125), Expect = 9e-08
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +3
Query: 63 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXX 239
+ L+ +++ AF ++D +G G I LG +R+L NPT I
Sbjct: 72 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGN 131
Query: 240 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 419
F + + K+ D E E +++DK+ NG++ E + ++ +G + +
Sbjct: 132 GQIEFPEFCVMMKRMMKETDS---EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 188
Query: 420 SEVAEVTKDCMDPEDDDGMIPYAAFLK 500
EV E+ K+ D DG I Y F+K
Sbjct: 189 EEVDEMIKEV--DVDGDGEIDYEEFVK 213
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 54.4 bits (125), Expect = 9e-08
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +3
Query: 63 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXX 239
+ L+ +++ AF ++D +G G I LG +R+L NPT I
Sbjct: 15 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGN 74
Query: 240 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 419
F + + K+ D E E +++DK+ NG++ E + ++ +G + +
Sbjct: 75 GQIEFPEFCVMMKRMMKETDS---EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 131
Query: 420 SEVAEVTKDCMDPEDDDGMIPYAAFLK 500
EV E+ K+ D DG I Y F+K
Sbjct: 132 EEVDEMIKEV--DVDGDGEIDYEEFVK 156
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 30 RPGGNRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIX 209
R G N+ + + +++ + AF ++D +G ++ LG+ +R L NPT +
Sbjct: 3 RQGTNQSVCSDADEFTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELL 62
Query: 210 XXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 386
F + + K+ DQ E K++DK+ NG + E H
Sbjct: 63 NMVNEYDVDGNGKIDFGEFCKMMKEMNKETDQ---ELIRLAFKVFDKDGNGYITAQEFKH 119
Query: 387 TLLALGEKLDDSEVAEVTKDCMDPEDDD 470
+ +GE+ + EV E+ ++ +D + D+
Sbjct: 120 FMTTMGERFSEEEVDEIIRE-VDKDGDE 146
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 52.8 bits (121), Expect = 3e-07
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Frame = +3
Query: 72 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXX 248
L++ ++ AF ++D +G G I + LG +R+L NPT +
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTI 88
Query: 249 XXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 428
F + + K+ D E E +++D++ NG + E + + +G++ D EV
Sbjct: 89 DFGEFCQMMKRMNKENDS---EMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEV 145
Query: 429 AEVTKDCMDPEDDDGMIPYAAF 494
E+ + D DG I Y F
Sbjct: 146 DEIIAEI--DIDGDGQIDYEEF 165
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 52.8 bits (121), Expect = 3e-07
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Frame = +3
Query: 72 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXX 248
L++ ++ AF ++D +G G I + LG +R+L NPT +
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTI 88
Query: 249 XXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 428
F + + K+ D E E +++D++ NG + E + + +G++ D EV
Sbjct: 89 DFGEFCQMMKRMNKENDS---EMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEV 145
Query: 429 AEVTKDCMDPEDDDGMIPYAAF 494
E+ + D DG I Y F
Sbjct: 146 DEIIAEI--DIDGDGQIDYEEF 165
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 51.2 bits (117), Expect = 8e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +3
Query: 63 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXX 239
+S L++ ++ AF ++D +G G I LG +RAL NPT +
Sbjct: 20 ISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGN 79
Query: 240 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 419
F + + K+ D E E K++D++ NG++ E ++ +G D+
Sbjct: 80 GQVEFPEFCVMMKRIMKETDS---EMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136
Query: 420 SEVAEVTK--DCMDPEDDDGMIPYAAFLK 500
EV E+ DC D +G I Y F+K
Sbjct: 137 VEVEEMMNEVDC----DGNGEIDYEEFVK 161
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +3
Query: 282 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 461
A+K K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 80
Query: 462 DDDGMIPYAAF 494
D DG I +F
Sbjct: 81 DGDGQIMRVSF 91
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Frame = +3
Query: 63 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATIXXXXXXXXX 233
+ LS + +E+ F+++D EGKG I A +G +LR + L +
Sbjct: 9 LEKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGS 68
Query: 234 XXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 413
+ + D+G E+ E +LYDK NG + ++L L AL + +
Sbjct: 69 GEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNV 128
Query: 414 DDSEVAEVTKDCMDPEDDDGMIPYAAFLK 500
+ E+ E+ + D G + + F++
Sbjct: 129 SEEELDEMIAEI--DADGSGTVDFDEFME 155
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Frame = +3
Query: 63 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATIXXXXXXXXX 233
+ LS + +E+ F+++D EGKG I A +G +LR + L +
Sbjct: 9 LEKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGS 68
Query: 234 XXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 413
+ + D+G E+ E +LYDK NG + ++L L AL + +
Sbjct: 69 GEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNV 128
Query: 414 DDSEVAEVTKDCMDPEDDDGMIPYAAFLK 500
+ E+ E+ + D G + + F++
Sbjct: 129 SEEELDEMIAEI--DADGSGTVDFDEFME 155
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 108 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 287
F +D G GKID+ L LRA+ NPT A + F+PIY + +
Sbjct: 14 FHFHDTLGDGKIDSKQLPTALRAMMLNPTEA-LLAEVSKARTSGARITVEEFIPIYKKVE 72
Query: 288 KDKDQG-AYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 428
+ ++F L +D+ NG ++ EL L GEK+ + EV
Sbjct: 73 AACGRSTTLKEFQTLLSHFDREGNGQIMLMELKSMLQNGGEKMTNQEV 120
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.026
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 324 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 497
+ ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 324 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 497
E + +DKN +G + EL LL LGEK +S++ + + D +G I FL
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 108 FSIYDFEGKGKIDAFNLGDLLRALNSNPT--LATIXXXXXXXXXXXXXXXXXXFLPIYSQ 281
F++YD E GKID +GD+ RA PT + T +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 282 AKKDK 296
K+K
Sbjct: 73 LAKEK 77
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 336 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 500
+YDKN++G + G ELT LL G E + + D D DG + Y +K
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 297 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 458
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 297 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 458
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 297 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 458
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 297 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 458
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 31.1 bits (67), Expect = 0.97
Identities = 27/146 (18%), Positives = 54/146 (36%)
Frame = +3
Query: 57 HKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXX 236
H + S+ +++ F+++D + G I L ++ L T +
Sbjct: 45 HLLEGYSEEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQR 104
Query: 237 XXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 416
+ + K E EC ++D++ENG + + L LG+ D
Sbjct: 105 GNHQIDFDEFCVVMRRLTMKKSNWNEVVKECFTVFDRSENGGISKKDFRFILRELGDITD 164
Query: 417 DSEVAEVTKDCMDPEDDDGMIPYAAF 494
+ + E+ + D +G+I Y F
Sbjct: 165 NQIIDEIFNEA--DVDGNGVIDYDEF 188
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 60 KMSDLSKNDVERASFAFSIYDFEGKGKID 146
+M + N RA FAF + D EGKG++D
Sbjct: 178 EMGNYHINSSARAQFAFQLMDEEGKGRVD 206
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 395 KKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVFVFLCLAVDGKELF 255
KK + + T F V+ QT + +FI S++ + + +DG +LF
Sbjct: 12 KKMISIGGCDYSTNFTSVVSNQTIRRVFIESIIALLIEHNLDGVDLF 58
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/132 (18%), Positives = 45/132 (34%)
Frame = +3
Query: 78 KNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXX 257
KN +E AF+ +D G+I L ++ PT +
Sbjct: 124 KNKIEEYKRAFNFFDANNDGRITIDELEKAMQKCGQKPTKLELRLIMYHGDNDQNGVITF 183
Query: 258 XFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEV 437
+Q Y+ E ++DK+++G + E+ + L L S +V
Sbjct: 184 DEFAHLMNGTASMNQYTYDQLREQFDMFDKDKDGFIEKMEMLSIVREL--SLQASFPRQV 241
Query: 438 TKDCMDPEDDDG 473
+ + D DG
Sbjct: 242 VEQLFNEADIDG 253
>AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical
protein Y65B4BL.1 protein.
Length = 422
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 326 FQEIFIRSLVFVFLCLAVDGKELFECEQLXALLLCTTEFLDGCQCG 189
F I I L+ + + +L +CEQ+ +L CT LD C G
Sbjct: 147 FSSILI--LISIIIPSVYSEPKLPDCEQIPKVLCCTQRVLDKCMSG 190
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 667 LRAPPEELSPPRALPAPVPQSRASV 593
LRAP EE PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
>Z67879-4|CAB54185.1| 297|Caenorhabditis elegans Hypothetical
protein C05E7.1 protein.
Length = 297
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 95 PFNVVLAEVAHFVWCLSVPSRSSLADVQIKK 3
PFN ++ + + FV C + SL+D+Q KK
Sbjct: 266 PFNQIIKKQSVFVGCHKLYGTISLSDIQAKK 296
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 54 PHKMSDLSKNDVERASFAFSIYDFEGK 134
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 54 PHKMSDLSKNDVERASFAFSIYDFEGK 134
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 27.9 bits (59), Expect = 9.0
Identities = 29/144 (20%), Positives = 57/144 (39%)
Frame = +3
Query: 75 SKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXX 254
S+ ++ F+ Y G + D+ L LR+L +PT +
Sbjct: 6 SQKQIDEIRECFNFYSTSGVLRTDS-QLRCALRSLGYSPTASKTDIYFKKLNKKPIEFAT 64
Query: 255 XXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAE 434
FL I + + + ++ L D+N+ M EL L +GE++ E+
Sbjct: 65 --FLDICKDEQNSPNP--LTEIIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEI-- 118
Query: 435 VTKDCMDPEDDDGMIPYAAFLKKV 506
K + + +GM+P+ A ++ +
Sbjct: 119 --KYLLSKVEVNGMVPHQALIEYI 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,239,174
Number of Sequences: 27780
Number of extensions: 307735
Number of successful extensions: 1108
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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