Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D12
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 58 2e-09
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 46 9e-06
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 45 1e-05
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 38 0.001
SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit Ssr2|Schizosa... 33 0.041
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 31 0.16
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 30 0.38
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 29 0.66
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 28 2.0
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 2.0
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 27 3.5
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 27 3.5
SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe... 27 3.5
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 27 4.7
SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces p... 27 4.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.7
SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like factor|Schizosacchar... 26 6.1
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 26 6.1
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 26 8.1
SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyce... 26 8.1
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 57.6 bits (133), Expect = 2e-09
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Frame = +3
Query: 345 AAFQSRLPFDKMSSLEAECFSD-LQGPSNCA-FIQIRNRILKMWFADPKKQLTQEQAVKK 518
+A S LP + +S LEAE S+ L+ P+ + ++ IRN I +W +P ++ +A+
Sbjct: 156 SAIASNLPPNALSPLEAEMLSEILENPTWLSLYLSIRNGICYLWHRNPTLYVSFNEALGI 215
Query: 519 MEPPYNGDPALIMRTHAFLERHGFINYGIYERVTPIPSPPKGKQRPKIIIIGAGVSGLAA 698
+ P L FL R+G INYG ++ + Q+ + IIGAG++G++
Sbjct: 216 VREK-KAFP-LASLAFEFLSRNGHINYGCIYIISSLKLDESLSQKT-VAIIGAGMAGISC 272
Query: 699 ARQLQSFGCE--------------VVVLEGRDRVGGRIVTY 779
ARQL + + +V+ E +R+GG I T+
Sbjct: 273 ARQLTNLFAQYEQDFLSRGEKPPRIVIYEASERLGGHIYTH 313
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 45.6 bits (103), Expect = 9e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 624 IPSPPKGKQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
+P PP + ++ IIG+G +GLAAA QL G VV+ E DR GG
Sbjct: 1746 VPRPPAERTGRRVAIIGSGPAGLAAADQLNRAGHHVVIYERADRPGG 1792
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 45.2 bits (102), Expect = 1e-05
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Frame = +3
Query: 435 FIQIRNRILKMWFADPKKQLTQEQAVKKMEPPYNGDPALIMRTHAFLERHGFINYGIY-- 608
+ QIRN I +W +P +++ +A A + + FL R+G+INYG
Sbjct: 429 YFQIRNSICWLWIKNPTHAISRVEAQGVCVDRCLFQLASL--AYEFLVRYGYINYGCLSF 486
Query: 609 ------ERVTPIPSPPKGKQRPKIIIIGAGVSGLAAARQL--------QSF------GCE 728
E T S KQ+ I ++GAG++GL ARQL SF +
Sbjct: 487 DSSFTNETNTGTTSSSASKQKT-IAVVGAGLTGLICARQLTGLFSQYSSSFLSKNELPPK 545
Query: 729 VVVLEGRDRVGGRI 770
V++LE ++R GGRI
Sbjct: 546 VIILEAKERTGGRI 559
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 663 IIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTY 779
++IG G GLA+AR+ G +V ++E R+GG V Y
Sbjct: 11 LVIGGGSGGLASARRAAKHGAKVALIEASGRLGGTCVNY 49
>SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit
Ssr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 503
Score = 33.5 bits (73), Expect = 0.041
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +3
Query: 405 SDLQGPSNCAFIQIRNRILKMWFADPKKQLTQEQAVKKMEPPYNGDPALIMRTHAFLERH 584
S L+ PS + R+ ++ + +P + LT + + GD I+R HAFLE+
Sbjct: 48 SPLKTPS--IYKDYRDFMINSYRLEPNEYLTVTACRRNLV----GDVCAIIRVHAFLEQW 101
Query: 585 GFINYGIYERVTP 623
G INY I P
Sbjct: 102 GLINYQIDPETRP 114
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 537 GDPALIMRTHAFLERHGFINYGIYERVTPIPSPPKGKQRPKII 665
GD ++R H FLE+ G INY + P P +I+
Sbjct: 120 GDVCAVLRVHRFLEQWGLINYNVNPDTRPSKIGPPSTSHFQIL 162
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 30.3 bits (65), Expect = 0.38
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 663 IIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYRKG 788
I+IG G++GL+A + G V++L+ GG V G
Sbjct: 42 IVIGGGLAGLSATNTILDLGGNVLLLDKNTAFGGNSVKAASG 83
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 29.5 bits (63), Expect = 0.66
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 648 QRPKIIIIGAGVSGLAAARQLQSFGCEVVVLE 743
Q IIIIGAG++G A L G +V+VLE
Sbjct: 4 QDADIIIIGAGITGCALGAALGRQGRKVLVLE 35
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
K+ ++G G+ GL G EV V+E VGG
Sbjct: 219 KMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGG 254
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 701 SSCQAGHSCSNNYNFWALFSFWRAWDWCYALIYSIVDKTMSLQ 573
SS + GHS S++ WA F + + W YA+ + + SLQ
Sbjct: 416 SSAEVGHSTSDSLISWASRLFTKGF-W-YAISFGVFSNCFSLQ 456
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 650 LFSFWRAWDWCYALIYSIVDKTMSLQKGMSS 558
+FS W WC++L+Y IV KT+ + K +SS
Sbjct: 321 IFSSIFFWVWCHSLLY-IVPKTLPI-KPLSS 349
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQL--QSFGCEVVVLEGRDRVGG 764
KI IIGAG SGL A+ L + +V + E R GG
Sbjct: 8 KIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG 45
>SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 660 IIIIGAGVSGLAAARQLQSFG 722
+II+GAGV GL+AA +L G
Sbjct: 7 VIIVGAGVFGLSAALELTKRG 27
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 591 INYGIYERVTPIPSPPKGKQRPKIIIIGAGVSGLAAARQLQSFGCEVV 734
+ G + + + P GK ++ IIG G G + A+++ GCE+V
Sbjct: 142 LRLGKWRQNLSLTDDPYGK---RVGIIGMGAIGKSFAQKILPLGCEIV 186
>SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 127 SSNKKILNPI-NPREVKSHLRVLRQWQVAEG 216
+ +KI+ P+ NP + + HLRVLR EG
Sbjct: 397 AEGQKIIRPLSNPIKTEGHLRVLRGSLAPEG 427
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.7
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 294 DDVEEINYKEMLNSLEGAAFQSRLPFDKMSSLEAECFS-DLQGPSNCAFIQIRNRILKMW 470
+D + N+ + ++ G+ S PF K + F ++ +N A+ R+L+++
Sbjct: 128 NDDDGTNFAFQVWNIFGSGEDSYRPFGKAV---VDGFDLEVNKGTNTAYSAFAKRMLEIY 184
Query: 471 FADPKKQLTQEQAVKKMEPPYNGDPALIMRTHAFLERHGF 590
+DP+++ A M P + A+ + FL H F
Sbjct: 185 ASDPRRKYYISAAPTCMVPDHTLTKAISENSFDFLSIHTF 224
>SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like
factor|Schizosaccharomyces pombe|chr 3|||Manual
Length = 203
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 542 SSINNENSCLSGETWFYQLWNI*ARNTNPK-PSKR 643
S I ++ S L+ +TWF + N + ++NP P KR
Sbjct: 150 SIIRDQKSLLNDKTWFKEALNERSSSSNPSTPRKR 184
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 315 YKEMLNSLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNCAFIQIRNRILKMWFAD 479
Y E+LNS + A + ++ FD+ S E + S+ + +Q+ L +W +D
Sbjct: 183 YYEILNSPDRACYLAKQAFDEAIS-ELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 671 NNYNFWALFSFWRAWDW 621
N YNFW F WR++++
Sbjct: 218 NFYNFWYNFDSWRSFEY 234
>SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 615 VTPIPSPPKGKQRPKIIIIGAGVSGLAAARQLQ 713
+ P P+ K RP ++ G GVS L+AA++ +
Sbjct: 157 IRPYAQLPESK-RPHMVYCGDGVSDLSAAKETE 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,178,057
Number of Sequences: 5004
Number of extensions: 60884
Number of successful extensions: 181
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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