Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D12
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 110 1e-24
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 110 1e-24
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z35602-2|CAA84671.3| 824|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 49 5e-06
Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 38 0.007
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.029
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 36 0.038
U23514-7|AAC46539.3| 493|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.20
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 33 0.20
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.20
Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical pr... 33 0.27
AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin monoox... 33 0.27
Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical p... 33 0.36
AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin monoox... 33 0.36
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 32 0.47
AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical... 31 0.82
AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid ... 31 0.82
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 31 1.1
U80839-17|AAB37921.1| 372|Caenorhabditis elegans Serpentine rec... 29 3.3
AL031633-22|CAB97238.1| 512|Caenorhabditis elegans Hypothetical... 29 3.3
AJ582072-1|CAE46542.1| 512|Caenorhabditis elegans flavin monoox... 29 3.3
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 28 7.7
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 28 7.7
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 28 7.7
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 110 bits (265), Expect = 1e-24
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 3/175 (1%)
Frame = +3
Query: 330 NSLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNCA--FIQIRNRILKMWFADPKKQLTQE 503
N+L AA +RLPFD+ + E F +L F+ +RN L W +P K+ T
Sbjct: 26 NALAAAASAARLPFDRPTDHELAFFPELWEHKTAVEVFLLLRNSTLATWQYNPLKECTAL 85
Query: 504 QAVKKMEPPYNGDPALIMRTHAFLERHGFINYGIYERVTPIPSPPKGKQRPKIIIIGAGV 683
+ PP+N D LI +L RHG IN+G Y R T I S + R +I+IGAG
Sbjct: 86 DVRNNVFPPFNSDLDLIQNIVHYLSRHGLINFGRYVRSTKI-SRFLVRDRRSVIVIGAGA 144
Query: 684 SGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYR-KGPYVADLGAMVVTGLGGNPV 845
+G++AA QL+SFG +V+VLE R+ +GGRI +++ K + + G + + +P+
Sbjct: 145 AGISAATQLESFGFDVIVLEARNCIGGRIHSFKSKSGEIMETGGDTLRKIEDSPM 199
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 110 bits (265), Expect = 1e-24
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 3/175 (1%)
Frame = +3
Query: 330 NSLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNCA--FIQIRNRILKMWFADPKKQLTQE 503
N+L AA +RLPFD+ + E F +L F+ +RN L W +P K+ T
Sbjct: 26 NALAAAASAARLPFDRPTDHELAFFPELWEHKTAVEVFLLLRNSTLATWQYNPLKECTAL 85
Query: 504 QAVKKMEPPYNGDPALIMRTHAFLERHGFINYGIYERVTPIPSPPKGKQRPKIIIIGAGV 683
+ PP+N D LI +L RHG IN+G Y R T I S + R +I+IGAG
Sbjct: 86 DVRNNVFPPFNSDLDLIQNIVHYLSRHGLINFGRYVRSTKI-SRFLVRDRRSVIVIGAGA 144
Query: 684 SGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYR-KGPYVADLGAMVVTGLGGNPV 845
+G++AA QL+SFG +V+VLE R+ +GGRI +++ K + + G + + +P+
Sbjct: 145 AGISAATQLESFGFDVIVLEARNCIGGRIHSFKSKSGEIMETGGDTLRKIEDSPM 199
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 89.4 bits (212), Expect = 3e-18
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Frame = +3
Query: 333 SLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNCA--FIQIRNRILKMWFADPKKQLTQEQ 506
SL A + + D+ + +EA F ++Q + + F+ IRN L +W A + T E
Sbjct: 69 SLAEVARRHGISADRPTEIEAAFFPEVQMSRSFSDVFLMIRNTTLSIWLASATTECTAED 128
Query: 507 AVKKMEPPYNGDPALIMRTHAFLERHGFINYGIYERVTPIPSPPKGKQRPKIIIIGAGVS 686
+K + PPYN + L+ FL R G IN G + T + + ++ +++IGAG +
Sbjct: 129 VIKHLTPPYNTEIHLVQNIVLFLSRFGMINIGFFFPKTELVN---NMEKKFVVVIGAGAA 185
Query: 687 GLAAARQLQSFGCEVVVLEGRDRVGGRI 770
G+AAA QL +FG +V V+E GGR+
Sbjct: 186 GIAAATQLLTFGFDVAVVEASGLTGGRV 213
>Z35602-2|CAA84671.3| 824|Caenorhabditis elegans Hypothetical
protein R13G10.2 protein.
Length = 824
Score = 83.0 bits (196), Expect = 3e-16
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Frame = +3
Query: 420 PSNCAFIQIRNRILKMWFADPKKQLTQEQAVKKMEPPY--NGDPALIMRTHA------FL 575
P + ++Q+RN I+ MW P +LT VK +EP G + H FL
Sbjct: 274 PISIYYLQVRNTIIAMWLKHPFVELT----VKMIEPQIIVRGHARIFFIEHLIHPILEFL 329
Query: 576 ERHGFINYGIYE-RVTPIPSPPKGKQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRD 752
G +NYG ++ R+ P+ RPKI IIGAG+SG++ AR L+ G + V+ E +D
Sbjct: 330 TIKGVVNYGAFDFRIDPLNG-----MRPKIAIIGAGISGISTARHLKHLGIDAVLFEAKD 384
Query: 753 RVGGRIVTYRKGPYVADLGAMVVTGLGGNPVT 848
R GGR++ + GA ++ G NP+T
Sbjct: 385 RFGGRMMDDQSLGVSVGKGAQIIVGNINNPIT 416
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 651 RPKIIIIGAGVSGLAAARQLQSFGC-EVVVLEGRDRVGGRI--VTYRKGPYVADLGAMVV 821
+P I I+GAG+SGL+ AR+L G + + EG DR+GGRI + Y+ G +GA +
Sbjct: 31 KPSIAIVGAGISGLSTARRLIELGIDDFDIYEGLDRIGGRIHAIPYKDG--FLQMGAQFI 88
Query: 822 TGLGGNPV 845
G NP+
Sbjct: 89 NG-AQNPL 95
>Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 455
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 639 KGKQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMV 818
K + + K+ IIGAG++GL +A + G + + EG +R+GGR+ + GA
Sbjct: 2 KNESKVKVCIIGAGLAGLRSAIHFEQVGIDYTIFEGSNRIGGRVYPFEYQDGYLHFGAEY 61
Query: 819 VTGL 830
V G+
Sbjct: 62 VNGV 65
>Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical
protein F55C5.6 protein.
Length = 437
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 645 KQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMVVT 824
++ I IIGAG +GL AA++ + G + EG DR+GGR+ ++ GA +
Sbjct: 19 QENASIAIIGAGFAGLRAAQRFEELGIVYTIFEGSDRIGGRVYSFPYQNGYLQFGAEYIN 78
Query: 825 G 827
G
Sbjct: 79 G 79
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = +3
Query: 660 IIIIGAGVSGLAAARQLQSF--GCEVVVLEGRDRVGGRI----VTYRKGPYVADLGAMVV 821
+I++GAG++GL AAR +Q G V+VLE R +VGGRI + R G D G+ +
Sbjct: 48 VIVVGAGLTGLTAARNIQQNRPGLSVLVLEARGQVGGRIRYATMQTRNGVEFVDTGSQFI 107
Query: 822 T 824
+
Sbjct: 108 S 108
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +3
Query: 627 PSPPKGKQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
P P +I IIG+G SGL AA QL G VVV E ++RVGG
Sbjct: 1838 PCKPAFNTGKRIAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +3
Query: 627 PSPPKGKQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
P P +I IIG+G SGL AA QL G VVV E ++RVGG
Sbjct: 1838 PCKPAFNTGKRIAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = +3
Query: 645 KQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVT 776
KQ IIIG G +GL AA L G +V VLE R VGG VT
Sbjct: 12 KQSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMVVTGL 830
KI IIGAG +GL +A+ G +V + E D+VGG V K + L ++ T L
Sbjct: 4 KICIIGAGAAGLVSAKHAIKQGYQVDIFEQTDQVGGTWVYSEKTGCHSSLYKVMKTNL 61
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
++ +IGAG +GLAAA+ + G EV V E VGG
Sbjct: 4 RVCVIGAGAAGLAAAKHSLAQGLEVEVFEQTGNVGG 39
>U23514-7|AAC46539.3| 493|Caenorhabditis elegans Hypothetical
protein F48E8.3 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.067
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +3
Query: 654 PKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
P ++++G G++GL+A+ + + G V+++EG GG
Sbjct: 9 PTVVVVGGGLAGLSASLDIINGGGRVILVEGEGNTGG 45
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 642 GKQRPKIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
G+ K+++IGAGV GL Q G EV +E VGG
Sbjct: 196 GQVPKKMVVIGAGVIGLELGSVWQRLGAEVTAVEFLGHVGG 236
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
K++I+GAG SGL + R +G +V E VGG
Sbjct: 7 KLLIVGAGASGLPSLRHALLYGIDVTCFERTKDVGG 42
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 537 GDPALIMRTHAFLERHGFINYGIYERVTPIPSPP 638
GD I+R H+FLE+ G +NY + P P P
Sbjct: 151 GDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAP 184
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
K++I+GAG SGL + R +G +V E VGG
Sbjct: 7 KLLIVGAGASGLPSLRHALLYGIDVTCFERTKDVGG 42
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 537 GDPALIMRTHAFLERHGFINYGIYERVTPIPSPP 638
GD I+R H+FLE+ G +NY + P P P
Sbjct: 151 GDVCSIVRLHSFLEQWGLLNYQVDSDARPAPVAP 184
>Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical
protein K08C7.5 protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
++ +IGAG SGL + R +G +V E D +GG
Sbjct: 5 RVAVIGAGASGLPSIRHGLLYGFDVTCFEASDDIGG 40
>AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGG 764
++ +IGAG SGL + R +G +V E D +GG
Sbjct: 5 RVAVIGAGASGLPSIRHGLLYGFDVTCFEASDDIGG 40
>Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical
protein F53F4.5 protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMVV 821
++ ++GAG SGL A + G +VV E +GG + YR G D+G V+
Sbjct: 2 RVCVVGAGASGLPAIKACIEEGLDVVCFEKTADIGG-LWNYRPGQ--KDIGGTVM 53
>AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 657 KIIIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMVV 821
++ ++GAG SGL A + G +VV E +GG + YR G D+G V+
Sbjct: 2 RVCVVGAGASGLPAIKACIEEGLDVVCFEKTADIGG-LWNYRPGQ--KDIGGTVM 53
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 663 IIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIV 773
++IG G G+A+AR+ + FG V ++E R+GG V
Sbjct: 10 LVIGGGSGGIASARRAREFGVSVGLIES-GRLGGTCV 45
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 663 IIIGAGVSGLAAARQLQSFGCEVVVLEGRDRVGGRIV 773
++IG G G+A+AR+ + FG V ++E R+GG V
Sbjct: 24 LVIGGGSGGIASARRAREFGVSVGLIES-GRLGGTCV 59
>AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical
protein Y69A2AR.5 protein.
Length = 322
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +3
Query: 654 PKIIIIGAGVSGLAAARQLQSF--GCEVVVL 740
PKI ++GAG++G+A+A +Q CEV ++
Sbjct: 2 PKIAVLGAGINGIASALAIQERLPNCEVTII 32
>AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid
oxidase protein.
Length = 322
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +3
Query: 654 PKIIIIGAGVSGLAAARQLQSF--GCEVVVL 740
PKI ++GAG++G+A+A +Q CEV ++
Sbjct: 2 PKIAVLGAGINGIASALAIQERLPNCEVTII 32
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 591 INYGIYERVTPIPSPPKGK-QRPK--IIIIGAGVSGLAAARQL 710
+N G ++ I PPK PK ++I+G G+ G A ARQL
Sbjct: 2 LNRGTFQVFRGISGPPKKSVDLPKYDLVIVGGGIVGCATARQL 44
>U80839-17|AAB37921.1| 372|Caenorhabditis elegans Serpentine
receptor, class w protein97 protein.
Length = 372
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 2 VXFWCFVFSDRFQLITLFLKHIFVKNESP 88
V FWCF+FS F L+ F ++ FV + P
Sbjct: 164 VIFWCFLFSAFFSLVYYF-RYDFVLKKDP 191
>AL031633-22|CAB97238.1| 512|Caenorhabditis elegans Hypothetical
protein Y39A1A.19 protein.
Length = 512
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 651 RPKIIIIGAGVSGLAAARQLQSF-GCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMV 818
+ +++++GAG SGL + R + EV E + VGG + Y+ PY +L ++
Sbjct: 5 KKQLLVVGAGASGLPSIRHALLYPNVEVTCFEKTNEVGG-LWNYK--PYKTELSTVM 58
>AJ582072-1|CAE46542.1| 512|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 512
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 651 RPKIIIIGAGVSGLAAARQLQSF-GCEVVVLEGRDRVGGRIVTYRKGPYVADLGAMV 818
+ +++++GAG SGL + R + EV E + VGG + Y+ PY +L ++
Sbjct: 5 KKQLLVVGAGASGLPSIRHALLYPNVEVTCFEKTNEVGG-LWNYK--PYKTELSTVM 58
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 660 IIIIGAGVSGLAAARQLQSFGCEVVVLE 743
+I+IG G GLAAA++ G +V L+
Sbjct: 175 LIVIGGGSGGLAAAKEASRLGKKVACLD 202
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 660 IIIIGAGVSGLAAARQLQSFGCEVVVLE 743
+I+IG G GLAAA++ G +V L+
Sbjct: 33 LIVIGGGSGGLAAAKEASRLGKKVACLD 60
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 660 IIIIGAGVSGLAAARQLQSFGCEVVVLE 743
+I+IG G GLAAA++ G +V L+
Sbjct: 175 LIVIGGGSGGLAAAKEASRLGKKVACLD 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,791,206
Number of Sequences: 27780
Number of extensions: 353018
Number of successful extensions: 985
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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