Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D11
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6C7C Cluster: PREDICTED: similar to mitochondr...    42   0.018
UniRef50_Q2VKI7 Cluster: Tes14; n=3; mulleri subgroup|Rep: Tes14...    37   0.50 
UniRef50_Q6CR63 Cluster: Similar to sp|P19955 Saccharomyces cere...    35   1.5  
UniRef50_Q753R6 Cluster: AFR260Cp; n=1; Eremothecium gossypii|Re...    35   2.0  
UniRef50_Q4FR21 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_A0NGR0 Cluster: ENSANGP00000031145; n=2; Culicidae|Rep:...    33   4.7  
UniRef50_Q7S3Z3 Cluster: Predicted protein; n=4; Sordariomycetes...    33   4.7  
UniRef50_A7TS69 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_UPI0000DB6C7C Cluster: PREDICTED: similar to mitochondrial
           ribosomal protein S36; n=2; Apocrita|Rep: PREDICTED:
           similar to mitochondrial ribosomal protein S36 - Apis
           mellifera
          Length = 95

 Score = 41.5 bits (93), Expect = 0.018
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = +2

Query: 251 IPDIDLPARYKRQPLSEEEIAYINGGG 331
           I D+ LPAR++R+P+ E+EIAYIN GG
Sbjct: 67  IEDLYLPARFQRRPIDEKEIAYINRGG 93


>UniRef50_Q2VKI7 Cluster: Tes14; n=3; mulleri subgroup|Rep: Tes14 -
           Drosophila mulleri (Fruit fly)
          Length = 80

 Score = 36.7 bits (81), Expect = 0.50
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 248 AIPDIDLPARYKRQPLSEEEIAYINGGGI 334
           AI D +LPAR+ R+P+   E  YIN GGI
Sbjct: 50  AIEDWELPARFARKPIDPLEAEYINNGGI 78


>UniRef50_Q6CR63 Cluster: Similar to sp|P19955 Saccharomyces
           cerevisiae YFR049w YMR31 ribosomal protein; n=1;
           Kluyveromyces lactis|Rep: Similar to sp|P19955
           Saccharomyces cerevisiae YFR049w YMR31 ribosomal protein
           - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 133

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 266 LPARYKRQPLSEEEIAYINGGGI 334
           LP R+K +P+ E+EI  INGGGI
Sbjct: 111 LPPRFKLRPMDEQEIEIINGGGI 133


>UniRef50_Q753R6 Cluster: AFR260Cp; n=1; Eremothecium gossypii|Rep:
           AFR260Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 119

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +2

Query: 260 IDLPARYKRQPLSEEEIAYINGGGI 334
           +DLPARY+ +PL + E+  IN GGI
Sbjct: 94  LDLPARYRTRPLEDAEMECINQGGI 118


>UniRef50_Q4FR21 Cluster: Putative uncharacterized protein; n=1;
           Psychrobacter arcticus|Rep: Putative uncharacterized
           protein - Psychrobacter arcticum
          Length = 429

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +2

Query: 395 VEIDSVDIFCYIELND*KYYN 457
           VE D+VD++CYIELN+  YY+
Sbjct: 317 VERDNVDVYCYIELNNRLYYS 337


>UniRef50_A0NGR0 Cluster: ENSANGP00000031145; n=2; Culicidae|Rep:
           ENSANGP00000031145 - Anopheles gambiae str. PEST
          Length = 84

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = +2

Query: 236 MSTG-AIPDIDLPARYKRQPLSEEEIAYINGGG 331
           +S+G AI +  LPARY+R+P+ + E+  IN GG
Sbjct: 49  VSSGEAIEEWQLPARYRRKPIDDVEMDCINRGG 81


>UniRef50_Q7S3Z3 Cluster: Predicted protein; n=4;
           Sordariomycetes|Rep: Predicted protein - Neurospora
           crassa
          Length = 130

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 263 DLPARYKRQPLSEEEIAYINGG 328
           DLPAR++RQPL+E EI  I  G
Sbjct: 105 DLPARFRRQPLTEAEIEAIESG 126


>UniRef50_A7TS69 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 126

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 263 DLPARYKRQPLSEEEIAYINGGGIV 337
           +LPAR++ +P+ E E+  INGGG +
Sbjct: 102 ELPARFRFKPMDEAELDSINGGGAI 126


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,542,474
Number of Sequences: 1657284
Number of extensions: 6522038
Number of successful extensions: 12666
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12643
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)