Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D10
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.69 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   4.9  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 402 TYKQRASRQQVTETNKYC 349
           TY  +  R+ V +TNKYC
Sbjct: 305 TYFGKTGRKTVLKTNKYC 322


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 272 DVMALSSSKYQNDNIIYCTNR 210
           ++ AL S K  N+N++  TN+
Sbjct: 79  ELPALKSRKLNNNNVVSSTNQ 99


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 88  CTPMILVAPFSLCRERGET 32
           C P + V P   C E G T
Sbjct: 163 CDPAVCVLPDCFCSEDGTT 181


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 221 CTNRVKVEYRNKY 183
           CTN +  EY N+Y
Sbjct: 12  CTNVLSEEYTNQY 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,343
Number of Sequences: 336
Number of extensions: 1599
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)