Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D10
         (512 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    26   0.20 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.1  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   3.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   5.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.5  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 115 INTIFTLSQCTPMILV 68
           + TIFT S C PMIL+
Sbjct: 212 VATIFTFSYCIPMILI 227


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 109 TIFTLSQCTPMILVAPFSLCRERGETRWL 23
           T    + C   ++V PFS   E  E RWL
Sbjct: 85  TSLAFADCLVGLVVMPFSAIYEVLENRWL 113


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +1

Query: 316 SNKLNSK-EQTLTIFICFSDLLS 381
           +NK   K E  L   ICFS LLS
Sbjct: 121 ANKSTDKCENGLNFIICFSKLLS 143


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -2

Query: 142 KKNNVENLR 116
           KKNNVENL+
Sbjct: 11  KKNNVENLK 19


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/29 (24%), Positives = 19/29 (65%)
 Frame = -1

Query: 407 YELINNALPDSRSLKQINIVNVCSFEFNL 321
           ++ +NNA+ +  +    NI+++ + ++NL
Sbjct: 491 FQSLNNAVGEMEATNVTNILSMDNTQYNL 519


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,644
Number of Sequences: 438
Number of extensions: 1782
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)